RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 TAF1CQ15572 869 aaPredicted RBP10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 CTC1Q2NKJ3 1217 aa10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 USPL1Q5W0Q7 1092 aa10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 GALNT12Q8IXK2 581 aa10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 EPS8L3Q8TE67 593 aaKnown RBP10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 TMEM63CQ9P1W3 806 aa10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 TRAK1Q9UPV9 953 aa10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
SMC4P1-201ENST00000414479 FAM187AA6NFU0 413 aa10.7□□□□□ -0.7
SMC4P1-201ENST00000414479 CES1P23141 567 aa10.7□□□□□ -0.7
SMC4P1-201ENST00000414479 USP48Q86UV5 1035 aa10.7□□□□□ -0.7
SMC4P1-201ENST00000414479 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
SMC4P1-201ENST00000414479 PDZRN3Q9UPQ7 1066 aa10.7□□□□□ -0.7
SMC4P1-201ENST00000414479 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 USP17L7P0C7H9 530 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 EDN3P14138 238 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 GSTT1P30711 240 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 RUBCNLQ9H714 662 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 INPP5FQ9Y2H2 1132 aa10.69□□□□□ -0.7
SMC4P1-201ENST00000414479 AVPP01185 164 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 PTPN12Q05209 780 aaKnown RBP10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 VPS37DQ86XT2 251 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 KLRG1Q96E93 195 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 GAS2L1Q99501 681 aaPredicted RBP10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 BCO2Q9BYV7 579 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 SUV39H2Q9H5I1 410 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 GGT7Q9UJ14 662 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 KCNH4Q9UQ05 1017 aa10.68□□□□□ -0.7
SMC4P1-201ENST00000414479 FIGNL2A6NMB9 653 aa10.67□□□□□ -0.7
SMC4P1-201ENST00000414479 RGS20O76081 388 aa10.67□□□□□ -0.7
SMC4P1-201ENST00000414479 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
SMC4P1-201ENST00000414479 IRS1P35568 1242 aa10.67□□□□□ -0.7
SMC4P1-201ENST00000414479 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
SMC4P1-201ENST00000414479 ACBD3Q9H3P7 528 aa10.67□□□□□ -0.7
SMC4P1-201ENST00000414479 EREGO14944 169 aa10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 KCNQ4P56696 695 aa10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 C1orf127Q8N9H9 656 aa10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 ARMC5Q96C12 935 aa10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
SMC4P1-201ENST00000414479 FAM157BP0CG42 384 aa10.65□□□□□ -0.7
SMC4P1-201ENST00000414479 NXPE4Q6UWF7 544 aa10.65□□□□□ -0.7
SMC4P1-201ENST00000414479 PNMA5Q96PV4 448 aa10.65□□□□□ -0.7
SMC4P1-201ENST00000414479 CHRDQ9H2X0 955 aa10.65□□□□□ -0.7
SMC4P1-201ENST00000414479 BMP1P13497 986 aa10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 PWP1Q13610 501 aa10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 LAMC2Q13753 1193 aa10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 CCINQ13939 588 aa10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 EHD4Q9H223 541 aa10.64□□□□□ -0.71
SMC4P1-201ENST00000414479 H7C1W4 665 aa10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 ATXN7O15265 892 aaPredicted RBP10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 MAN1A2O60476 641 aa10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 HMGB1P09429 215 aaKnown RBP10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 XRCC5P13010 732 aaKnown RBP10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 ARID5AQ03989 594 aa10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 KIAA0319Q5VV43 1072 aa10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 NOC4LQ9BVI4 516 aaKnown RBP10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 ZFYVE1Q9HBF4 777 aa10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 TTF2Q9UNY4 1162 aaKnown RBP10.63□□□□□ -0.71
SMC4P1-201ENST00000414479 DNAJA1P31689 397 aaKnown RBP10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 VEGFBP49765 207 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 ZNF394Q53GI3 561 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 MEI1Q5TIA1 1274 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 PPM1HQ9ULR3 514 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 PCDHGC4Q9Y5F7 938 aa10.62□□□□□ -0.71
SMC4P1-201ENST00000414479 POTECB2RU33 542 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 AXIN1O15169 862 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 RARAP10276 462 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 RLBP1P12271 317 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 GRNP28799 593 aaKnown RBP10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 GRM2Q14416 872 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 RIPOR1Q6ZS17 1223 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 GMLQ99445 158 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 PCDHGB7Q9Y5F8 929 aa10.61□□□□□ -0.71
SMC4P1-201ENST00000414479 DGAT1O75907 488 aa10.6□□□□□ -0.71
SMC4P1-201ENST00000414479 PSAPP07602 524 aa10.6□□□□□ -0.71
SMC4P1-201ENST00000414479 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
SMC4P1-201ENST00000414479 OR13H1Q8NG92 308 aa10.6□□□□□ -0.71
SMC4P1-201ENST00000414479 ZCCHC2Q9C0B9 1178 aaKnown RBP10.6□□□□□ -0.71
SMC4P1-201ENST00000414479 DNMT3LQ9UJW3 386 aa10.6□□□□□ -0.71
SMC4P1-201ENST00000414479 KHNYNO15037 678 aaKnown RBP10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 SASH3O75995 380 aa10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 SOX18P35713 384 aa10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 SPATA32Q96LK8 384 aa10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 NUCKS1Q9H1E3 243 aaKnown RBP10.59□□□□□ -0.71
SMC4P1-201ENST00000414479 EFSO43281 561 aa10.58□□□□□ -0.72
SMC4P1-201ENST00000414479 GTF2F1P35269 517 aaKnown RBP eCLIP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 287.2 ms