RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 MPNDQ8N594 471 aa26.61■■□□□ 1.85
LMBR1-203ENST00000414218 JMYQ8N9B5 988 aa26.61■■□□□ 1.85
LMBR1-203ENST00000414218 SUPT20HQ8NEM7 779 aa26.61■■□□□ 1.85
LMBR1-203ENST00000414218 RTFDC1Q9BY42 306 aaPredicted RBP26.61■■□□□ 1.85
LMBR1-203ENST00000414218 CLEC11AQ9Y240 323 aa26.61■■□□□ 1.85
LMBR1-203ENST00000414218 MYD88Q99836 296 aa26.6■■□□□ 1.85
LMBR1-203ENST00000414218 CHMP4AQ9BY43 222 aa26.6■■□□□ 1.85
LMBR1-203ENST00000414218 VPS33BQ9H267 617 aa26.6■■□□□ 1.85
LMBR1-203ENST00000414218 IRS4O14654 1257 aaPredicted RBP26.59■■□□□ 1.85
LMBR1-203ENST00000414218 SF3B3Q15393 1217 aaKnown RBP26.59■■□□□ 1.85
LMBR1-203ENST00000414218 PNMA8AQ86V59 439 aaPredicted RBP26.58■■□□□ 1.85
LMBR1-203ENST00000414218 TMC4Q7Z404 712 aa26.57■■□□□ 1.84
LMBR1-203ENST00000414218 ZBTB38Q8NAP3 1195 aaPredicted RBP26.57■■□□□ 1.84
LMBR1-203ENST00000414218 DDX58O95786 925 aaKnown RBP26.56■■□□□ 1.84
LMBR1-203ENST00000414218 LMOD1P29536 600 aaPredicted RBP26.56■■□□□ 1.84
LMBR1-203ENST00000414218 CELF1Q92879 486 aaKnown RBP26.56■■□□□ 1.84
LMBR1-203ENST00000414218 CCDC191Q8NCU4 936 aa26.55■■□□□ 1.84
LMBR1-203ENST00000414218 METTL22Q9BUU2 404 aaPredicted RBP26.55■■□□□ 1.84
LMBR1-203ENST00000414218 CREBZFQ9NS37 354 aa26.55■■□□□ 1.84
LMBR1-203ENST00000414218 ZNRF3Q9ULT6 936 aa26.55■■□□□ 1.84
LMBR1-203ENST00000414218 PASKQ96RG2 1323 aa26.55■■□□□ 1.84
LMBR1-203ENST00000414218 ADAMTSL1Q8N6G6 1762 aa26.55■■□□□ 1.84
LMBR1-203ENST00000414218 LTBP1Q14766 1721 aa26.54■■□□□ 1.84
LMBR1-203ENST00000414218 ITGBL1O95965 494 aaPredicted RBP26.54■■□□□ 1.84
LMBR1-203ENST00000414218 EPS15P42566 896 aa26.54■■□□□ 1.84
LMBR1-203ENST00000414218 SCNN1DP51172 638 aa26.54■■□□□ 1.84
LMBR1-203ENST00000414218 KIAA2012Q0VF49 1180 aa26.54■■□□□ 1.84
LMBR1-203ENST00000414218 JARID2Q92833 1246 aaPredicted RBP26.54■■□□□ 1.84
LMBR1-203ENST00000414218 SALL2Q9Y467 1007 aaPredicted RBP26.54■■□□□ 1.84
LMBR1-203ENST00000414218 IL16Q14005 1332 aa26.54■■□□□ 1.84
LMBR1-203ENST00000414218 CXCL9Q07325 125 aa26.53■■□□□ 1.84
LMBR1-203ENST00000414218 TWISTNBQ3B726 338 aaPredicted RBP26.53■■□□□ 1.84
LMBR1-203ENST00000414218 NCBP3Q53F19 620 aaKnown RBP26.53■■□□□ 1.84
LMBR1-203ENST00000414218 STK31Q9BXU1 1019 aa26.53■■□□□ 1.84
LMBR1-203ENST00000414218 CWC25Q9NXE8 425 aaPredicted RBP26.53■■□□□ 1.84
LMBR1-203ENST00000414218 MAP3K2Q9Y2U5 619 aa26.53■■□□□ 1.84
LMBR1-203ENST00000414218 COL4A1P02462 1669 aa26.53■■□□□ 1.84
LMBR1-203ENST00000414218 LRRC37AA6NMS7 1700 aa26.53■■□□□ 1.84
LMBR1-203ENST00000414218 PCCAP05165 728 aaPredicted RBP26.52■■□□□ 1.84
LMBR1-203ENST00000414218 MAP1SQ66K74 1059 aaPredicted RBP26.52■■□□□ 1.84
LMBR1-203ENST00000414218 CNTROBQ8N137 903 aa26.51■■□□□ 1.83
LMBR1-203ENST00000414218 DUOX1Q9NRD9 1551 aa26.5■■□□□ 1.83
LMBR1-203ENST00000414218 PI4KAP2A4QPH2 592 aa26.5■■□□□ 1.83
LMBR1-203ENST00000414218 HSP90B1P14625 803 aaKnown RBP26.5■■□□□ 1.83
LMBR1-203ENST00000414218 RPS8P62241 208 aaKnown RBP26.5■■□□□ 1.83
LMBR1-203ENST00000414218 KSR2Q6VAB6 950 aa26.5■■□□□ 1.83
LMBR1-203ENST00000414218 PI4KAP1Q8N8J0 262 aa26.5■■□□□ 1.83
LMBR1-203ENST00000414218 NSFL1CQ9UNZ2 370 aaKnown RBP26.5■■□□□ 1.83
LMBR1-203ENST00000414218 GPSM2P81274 684 aa26.49■■□□□ 1.83
LMBR1-203ENST00000414218 G2E3Q7L622 706 aa26.49■■□□□ 1.83
LMBR1-203ENST00000414218 SEC31BQ9NQW1 1179 aa26.49■■□□□ 1.83
LMBR1-203ENST00000414218 MKRN1Q9UHC7 482 aaKnown RBP26.49■■□□□ 1.83
LMBR1-203ENST00000414218 PDE8AO60658 829 aa26.48■■□□□ 1.83
LMBR1-203ENST00000414218 RAD17O75943 681 aa26.48■■□□□ 1.83
LMBR1-203ENST00000414218 CIAPIN1Q6FI81 312 aa26.48■■□□□ 1.83
LMBR1-203ENST00000414218 GPRC5DQ9NZD1 345 aa26.48■■□□□ 1.83
LMBR1-203ENST00000414218 C6orf229H3BNL8 230 aa26.47■■□□□ 1.83
LMBR1-203ENST00000414218 SLC4A2P04920 1241 aa26.47■■□□□ 1.83
LMBR1-203ENST00000414218 IGKV5-2P06315 115 aa26.47■■□□□ 1.83
LMBR1-203ENST00000414218 WASHC4Q2M389 1173 aa26.47■■□□□ 1.83
LMBR1-203ENST00000414218 IFFO2Q5TF58 517 aa26.47■■□□□ 1.83
LMBR1-203ENST00000414218 FANCIQ9NVI1 1328 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 TMEM88BA6NKF7 163 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 YDJCA8MPS7 323 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 GMPSP49915 693 aaPredicted RBP26.46■■□□□ 1.83
LMBR1-203ENST00000414218 TNIP1Q15025 636 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 CCDC152Q4G0S7 254 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 USP50Q70EL3 339 aaPredicted RBP26.46■■□□□ 1.83
LMBR1-203ENST00000414218 WDR63Q8IWG1 891 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 CCDC85AQ96PX6 553 aaPredicted RBP26.46■■□□□ 1.83
LMBR1-203ENST00000414218 POLLQ9UGP5 575 aa26.46■■□□□ 1.83
LMBR1-203ENST00000414218 RIMBP2O15034 1052 aa26.45■■□□□ 1.82
LMBR1-203ENST00000414218 NEXNQ0ZGT2 675 aa26.44■■□□□ 1.82
LMBR1-203ENST00000414218 FAM9BQ8IZU0 186 aa26.44■■□□□ 1.82
LMBR1-203ENST00000414218 BCL2L13Q9BXK5 485 aa26.44■■□□□ 1.82
LMBR1-203ENST00000414218 ADARB2Q9NS39 739 aaKnown RBP26.44■■□□□ 1.82
LMBR1-203ENST00000414218 CWF19L2Q2TBE0 894 aaKnown RBP26.43■■□□□ 1.82
LMBR1-203ENST00000414218 GPR101Q96P66 508 aaPredicted RBP26.43■■□□□ 1.82
LMBR1-203ENST00000414218 CDHR2Q9BYE9 1310 aa26.42■■□□□ 1.82
LMBR1-203ENST00000414218 TBC1D16Q8TBP0 767 aa26.42■■□□□ 1.82
LMBR1-203ENST00000414218 DBNDD1Q9H9R9 158 aa26.42■■□□□ 1.82
LMBR1-203ENST00000414218 CNTNAP1P78357 1384 aa26.42■■□□□ 1.82
LMBR1-203ENST00000414218 VAMP4O75379 141 aa26.41■■□□□ 1.82
LMBR1-203ENST00000414218 HSPA1AP0DMV8 641 aaKnown RBP26.41■■□□□ 1.82
LMBR1-203ENST00000414218 HSPA1BP0DMV9 641 aaKnown RBP26.41■■□□□ 1.82
LMBR1-203ENST00000414218 EYA3Q99504 573 aa26.41■■□□□ 1.82
LMBR1-203ENST00000414218 PCNTO95613 3336 aa26.41■■□□□ 1.82
LMBR1-203ENST00000414218 NEURL1BA8MQ27 555 aa26.4■■□□□ 1.82
LMBR1-203ENST00000414218 EXOSC9Q06265 439 aaKnown RBP26.4■■□□□ 1.82
LMBR1-203ENST00000414218 FMR1Q06787 632 aaKnown RBP eCLIP26.4■■□□□ 1.821e-12■■■■□ 24.2
LMBR1-203ENST00000414218 FLIIQ13045 1269 aa26.4■■□□□ 1.82
LMBR1-203ENST00000414218 DOK7Q18PE1 504 aa26.4■■□□□ 1.82
LMBR1-203ENST00000414218 CTSWP56202 376 aa26.39■■□□□ 1.82
LMBR1-203ENST00000414218 ANKRD18AQ8IVF6 992 aa26.39■■□□□ 1.82
LMBR1-203ENST00000414218 SPINK5Q9NQ38 1064 aaPredicted RBP26.39■■□□□ 1.82
LMBR1-203ENST00000414218 PODXL2Q9NZ53 605 aa26.39■■□□□ 1.82
LMBR1-203ENST00000414218 ANKIB1Q9P2G1 1089 aa26.39■■□□□ 1.82
LMBR1-203ENST00000414218 CNOT7Q9UIV1 285 aaKnown RBP26.38■■□□□ 1.81
LMBR1-203ENST00000414218 ZBTB12Q9Y330 459 aaPredicted RBP26.38■■□□□ 1.81
LMBR1-203ENST00000414218 CACNA1FO60840 1977 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms