RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 CHMP3Q9Y3E7 222 aa20.72■□□□□ 0.91
HLA-B-249ENST00000412585 COL11A2P13942 1736 aaPredicted RBP20.71■□□□□ 0.91
HLA-B-249ENST00000412585 PCDHB15Q9Y5E8 787 aa20.71■□□□□ 0.91
HLA-B-249ENST00000412585 DLEC1Q9Y238 1755 aa20.71■□□□□ 0.91
HLA-B-249ENST00000412585 PDE6BP35913 854 aa20.7■□□□□ 0.9
HLA-B-249ENST00000412585 RABL6Q3YEC7 729 aaPredicted RBP20.7■□□□□ 0.9
HLA-B-249ENST00000412585 CCDC152Q4G0S7 254 aa20.7■□□□□ 0.9
HLA-B-249ENST00000412585 KAZALD1Q96I82 304 aa20.7■□□□□ 0.9
HLA-B-249ENST00000412585 SGIP1Q9BQI5 828 aa20.7■□□□□ 0.9
HLA-B-249ENST00000412585 SPEF2Q9C093 1822 aa20.7■□□□□ 0.9
HLA-B-249ENST00000412585 CACNA1SQ13698 1873 aa20.69■□□□□ 0.9
HLA-B-249ENST00000412585 PTGER2P43116 358 aa20.69■□□□□ 0.9
HLA-B-249ENST00000412585 FOXO4P98177 505 aa20.69■□□□□ 0.9
HLA-B-249ENST00000412585 EPHA10Q5JZY3 1008 aa20.69■□□□□ 0.9
HLA-B-249ENST00000412585 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
HLA-B-249ENST00000412585 RPAP2Q8IXW5 612 aaPredicted RBP20.69■□□□□ 0.9
HLA-B-249ENST00000412585 IGHDP01880 384 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 CEP85Q6P2H3 762 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 ANKRD44Q8N8A2 993 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 PDZRN3Q9UPQ7 1066 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 RTL9Q8NET4 1388 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 SRGAP3O43295 1099 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 HMMRO75330 724 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 MTX1Q13505 466 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 SF3B3Q15393 1217 aaKnown RBP20.68■□□□□ 0.9
HLA-B-249ENST00000412585 TTLL11Q8NHH1 800 aa20.68■□□□□ 0.9
HLA-B-249ENST00000412585 RPGRQ92834 1020 aaKnown RBP20.68■□□□□ 0.9
HLA-B-249ENST00000412585 CSF1RP07333 972 aa20.67■□□□□ 0.9
HLA-B-249ENST00000412585 CCDC57Q2TAC2 916 aa20.67■□□□□ 0.9
HLA-B-249ENST00000412585 FAM161AQ3B820 660 aa20.67■□□□□ 0.9
HLA-B-249ENST00000412585 CCDC85AQ96PX6 553 aaPredicted RBP20.67■□□□□ 0.9
HLA-B-249ENST00000412585 TAF1P21675 1872 aa20.66■□□□□ 0.9
HLA-B-249ENST00000412585 IFIT5Q13325 482 aaKnown RBP20.66■□□□□ 0.9
HLA-B-249ENST00000412585 SKAP1Q86WV1 359 aa20.66■□□□□ 0.9
HLA-B-249ENST00000412585 LRP5O75197 1615 aa20.66■□□□□ 0.9
HLA-B-249ENST00000412585 ANKRD18BA2A2Z9 1011 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 CRY2Q49AN0 593 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 TAF7LQ5H9L4 462 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 ERICH6Q7L0X2 663 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 KLHL34Q8N239 644 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 GREM2Q9H772 168 aa20.65■□□□□ 0.9
HLA-B-249ENST00000412585 C3orf67Q6ZVT6 689 aa20.64■□□□□ 0.9
HLA-B-249ENST00000412585 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.9
HLA-B-249ENST00000412585 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.9
HLA-B-249ENST00000412585 KIAA1551Q9HCM1 1747 aa20.64■□□□□ 0.89
HLA-B-249ENST00000412585 KLRG2A4D1S0 409 aaPredicted RBP20.63■□□□□ 0.89
HLA-B-249ENST00000412585 H0YIN7 160 aa20.63■□□□□ 0.89
HLA-B-249ENST00000412585 ITGA6P23229 1130 aa20.63■□□□□ 0.89
HLA-B-249ENST00000412585 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
HLA-B-249ENST00000412585 C2CD5Q86YS7 1000 aa20.63■□□□□ 0.89
HLA-B-249ENST00000412585 CDC5LQ99459 802 aaKnown RBP20.63■□□□□ 0.89
HLA-B-249ENST00000412585 PNMA6EA0A0J9YXQ4 647 aa20.63■□□□□ 0.89
HLA-B-249ENST00000412585 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
HLA-B-249ENST00000412585 RWDD1Q9H446 243 aaPredicted RBP20.63■□□□□ 0.89
HLA-B-249ENST00000412585 CD2APQ9Y5K6 639 aa20.63■□□□□ 0.89
HLA-B-249ENST00000412585 NPR1P16066 1061 aa20.62■□□□□ 0.89
HLA-B-249ENST00000412585 SSH3Q8TE77 659 aa20.62■□□□□ 0.89
HLA-B-249ENST00000412585 BRCA1P38398 1863 aaKnown RBP20.61■□□□□ 0.89
HLA-B-249ENST00000412585 SRGNP10124 158 aa20.61■□□□□ 0.89
HLA-B-249ENST00000412585 TGFB2P61812 414 aa20.61■□□□□ 0.89
HLA-B-249ENST00000412585 MASTLQ96GX5 879 aa20.61■□□□□ 0.89
HLA-B-249ENST00000412585 HOXA10P31260 410 aaPredicted RBP20.6■□□□□ 0.89
HLA-B-249ENST00000412585 IGHMBP2P38935 993 aaKnown RBP20.6■□□□□ 0.89
HLA-B-249ENST00000412585 HDAC1Q13547 482 aaPredicted RBP20.6■□□□□ 0.89
HLA-B-249ENST00000412585 POLA2Q14181 598 aa20.6■□□□□ 0.89
HLA-B-249ENST00000412585 STYK1Q6J9G0 422 aa20.59■□□□□ 0.89
HLA-B-249ENST00000412585 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
HLA-B-249ENST00000412585 SIRT2Q8IXJ6 389 aa20.59■□□□□ 0.89
HLA-B-249ENST00000412585 ZNF622Q969S3 477 aaKnown RBP eCLIP20.59■□□□□ 0.89
HLA-B-249ENST00000412585 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
HLA-B-249ENST00000412585 GRAPQ13588 217 aa20.58■□□□□ 0.89
HLA-B-249ENST00000412585 GRAPLQ8TC17 118 aaPredicted RBP20.58■□□□□ 0.89
HLA-B-249ENST00000412585 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
HLA-B-249ENST00000412585 MPHOSPH8Q99549 860 aa20.58■□□□□ 0.89
HLA-B-249ENST00000412585 SEC31BQ9NQW1 1179 aa20.58■□□□□ 0.89
HLA-B-249ENST00000412585 A0A1B0GUL6 1792 aa20.58■□□□□ 0.89
HLA-B-249ENST00000412585 CHRNA5P30532 468 aa20.58■□□□□ 0.88
HLA-B-249ENST00000412585 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.88
HLA-B-249ENST00000412585 CNKSR1Q969H4 720 aa20.58■□□□□ 0.88
HLA-B-249ENST00000412585 COPRSQ9NQ92 184 aa20.58■□□□□ 0.88
HLA-B-249ENST00000412585 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
HLA-B-249ENST00000412585 OS9Q13438 667 aaPredicted RBP20.57■□□□□ 0.88
HLA-B-249ENST00000412585 HSP90AB4PQ58FF6 505 aa20.57■□□□□ 0.88
HLA-B-249ENST00000412585 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
HLA-B-249ENST00000412585 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
HLA-B-249ENST00000412585 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
HLA-B-249ENST00000412585 SURF6O75683 361 aaKnown RBP20.56■□□□□ 0.88
HLA-B-249ENST00000412585 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
HLA-B-249ENST00000412585 KLHDC4Q8TBB5 520 aa20.56■□□□□ 0.88
HLA-B-249ENST00000412585 CELF1Q92879 486 aaKnown RBP20.56■□□□□ 0.88
HLA-B-249ENST00000412585 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
HLA-B-249ENST00000412585 CNNM1Q9NRU3 951 aa20.56■□□□□ 0.88
HLA-B-249ENST00000412585 COL4A1P02462 1669 aa20.56■□□□□ 0.88
HLA-B-249ENST00000412585 DPEP1P16444 411 aa20.55■□□□□ 0.88
HLA-B-249ENST00000412585 G3BP1Q13283 466 aaKnown RBP eCLIP20.55■□□□□ 0.888e-6■□□□□ 9
HLA-B-249ENST00000412585 LDHAL6AQ6ZMR3 332 aa20.55■□□□□ 0.88
HLA-B-249ENST00000412585 TMC4Q7Z404 712 aa20.55■□□□□ 0.88
HLA-B-249ENST00000412585 SIL1Q9H173 461 aa20.55■□□□□ 0.88
HLA-B-249ENST00000412585 PA2G4Q9UQ80 394 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms