RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 ZNF277Q9NRM2 450 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-207ENST00000411985 ADAMTSL1Q8N6G6 1762 aa11.79□□□□□ -0.52
BRCC3-207ENST00000411985 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 IARSP41252 1262 aaKnown RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 EXOSC9Q06265 439 aaKnown RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
BRCC3-207ENST00000411985 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 ZBTB38Q8NAP3 1195 aaPredicted RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
BRCC3-207ENST00000411985 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
BRCC3-207ENST00000411985 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
BRCC3-207ENST00000411985 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
BRCC3-207ENST00000411985 TRPM7Q96QT4 1865 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 IRS4O14654 1257 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-207ENST00000411985 VAMP4O75379 141 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 GRAPQ13588 217 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
BRCC3-207ENST00000411985 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-207ENST00000411985 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-207ENST00000411985 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 ZNF521Q96K83 1311 aa11.78□□□□□ -0.52
BRCC3-207ENST00000411985 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.52
BRCC3-207ENST00000411985 CCER2I3L3R5 266 aa11.77□□□□□ -0.53
BRCC3-207ENST00000411985 BBOX1O75936 387 aa11.77□□□□□ -0.53
BRCC3-207ENST00000411985 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
BRCC3-207ENST00000411985 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
BRCC3-207ENST00000411985 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.53
BRCC3-207ENST00000411985 SF3B3Q15393 1217 aaKnown RBP11.77□□□□□ -0.53
BRCC3-207ENST00000411985 G2E3Q7L622 706 aa11.77□□□□□ -0.53
BRCC3-207ENST00000411985 SLC51AQ86UW1 340 aa11.77□□□□□ -0.53
BRCC3-207ENST00000411985 SCN9AQ15858 1988 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 DDNO94850 711 aaPredicted RBP11.76□□□□□ -0.53
BRCC3-207ENST00000411985 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
BRCC3-207ENST00000411985 HSPA6P17066 643 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 FLIIQ13045 1269 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 TMC4Q7Z404 712 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 SP8Q8IXZ3 490 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 JDP2Q8WYK2 163 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 ZNF541Q9H0D2 1346 aa11.76□□□□□ -0.53
BRCC3-207ENST00000411985 POTECB2RU33 542 aa11.75□□□□□ -0.53
BRCC3-207ENST00000411985 FZD9O00144 591 aa11.75□□□□□ -0.53
BRCC3-207ENST00000411985 IGKV5-2P06315 115 aa11.75□□□□□ -0.53
BRCC3-207ENST00000411985 FKBP5Q13451 457 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-207ENST00000411985 SUPT20HQ8NEM7 779 aa11.75□□□□□ -0.53
BRCC3-207ENST00000411985 POLR2AP24928 1970 aaKnown RBP11.75□□□□□ -0.53
BRCC3-207ENST00000411985 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
BRCC3-207ENST00000411985 PDE8AO60658 829 aa11.74□□□□□ -0.53
BRCC3-207ENST00000411985 FSTL1Q12841 308 aa11.74□□□□□ -0.53
BRCC3-207ENST00000411985 CWF19L2Q2TBE0 894 aaKnown RBP11.74□□□□□ -0.53
BRCC3-207ENST00000411985 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-207ENST00000411985 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
BRCC3-207ENST00000411985 MPNDQ8N594 471 aa11.74□□□□□ -0.53
BRCC3-207ENST00000411985 CELF1Q92879 486 aaKnown RBP11.74□□□□□ -0.53
BRCC3-207ENST00000411985 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
BRCC3-207ENST00000411985 VPS33BQ9H267 617 aa11.74□□□□□ -0.53
BRCC3-207ENST00000411985 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 PPIP5K2O43314 1243 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 AOC3Q16853 763 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 CCDC152Q4G0S7 254 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 GPC2Q8N158 579 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 DNAAF4Q8WXU2 420 aa11.73□□□□□ -0.53
BRCC3-207ENST00000411985 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
BRCC3-207ENST00000411985 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
BRCC3-207ENST00000411985 MYH13Q9UKX3 1938 aa11.72□□□□□ -0.53
BRCC3-207ENST00000411985 E9PSI1 815 aa11.72□□□□□ -0.53
BRCC3-207ENST00000411985 EIF6P56537 245 aaKnown RBP11.72□□□□□ -0.53
BRCC3-207ENST00000411985 NIM1KQ8IY84 436 aa11.72□□□□□ -0.53
BRCC3-207ENST00000411985 APLP1P51693 650 aa11.71□□□□□ -0.53
BRCC3-207ENST00000411985 CTSWP56202 376 aa11.71□□□□□ -0.53
BRCC3-207ENST00000411985 RPS8P62241 208 aaKnown RBP11.71□□□□□ -0.53
BRCC3-207ENST00000411985 GCKRQ14397 625 aa11.71□□□□□ -0.53
BRCC3-207ENST00000411985 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
BRCC3-207ENST00000411985 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
BRCC3-207ENST00000411985 ECM29Q5VYK3 1845 aa11.71□□□□□ -0.54
BRCC3-207ENST00000411985 PCNTO95613 3336 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 H7C1W4 665 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 KIAA2012Q0VF49 1180 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 UBE3BQ7Z3V4 1068 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
BRCC3-207ENST00000411985 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
BRCC3-207ENST00000411985 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
BRCC3-207ENST00000411985 RTL9Q8NET4 1388 aa11.69□□□□□ -0.54
BRCC3-207ENST00000411985 F6X3S4 739 aa11.69□□□□□ -0.54
BRCC3-207ENST00000411985 GPSM2P81274 684 aa11.69□□□□□ -0.54
BRCC3-207ENST00000411985 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
BRCC3-207ENST00000411985 ANKRD18AQ8IVF6 992 aa11.69□□□□□ -0.54
BRCC3-207ENST00000411985 TTLL11Q8NHH1 800 aa11.69□□□□□ -0.54
BRCC3-207ENST00000411985 TAF1DQ9H5J8 278 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-207ENST00000411985 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
BRCC3-207ENST00000411985 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
BRCC3-207ENST00000411985 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
BRCC3-207ENST00000411985 EPHX2P34913 555 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms