RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 ERCC5P28715 1186 aaPredicted RBP6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 FANCCQ00597 558 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 FIGNL1Q6PIW4 674 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 NLRP13Q86W25 1043 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 SRCIN1Q9C0H9 1055 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 USPL1Q5W0Q7 1092 aa6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 METTL16Q86W50 562 aaKnown RBP6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 RNF34Q969K3 372 aa6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 PMEPA1Q969W9 287 aa6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 ABI2Q9NYB9 513 aaPredicted RBP6.48□□□□□ -1.37
RNU2-28P-201ENST00000410457 EFSO43281 561 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 MAN1A2O60476 641 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 CTSHP09668 335 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 ZNF76P36508 570 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 VEGFBP49765 207 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 NFX1Q12986 1120 aaKnown RBP6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 LAMC2Q13753 1193 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 GAS2L1Q99501 681 aaPredicted RBP6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 CHRDQ9H2X0 955 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 KCNH4Q9UQ05 1017 aa6.47□□□□□ -1.37
RNU2-28P-201ENST00000410457 RAD51AP2Q09MP3 1159 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 NT5DC4Q86YG4 428 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 GALNT12Q8IXK2 581 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 ZCCHC2Q9C0B9 1178 aaKnown RBP6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 ATP13A2Q9NQ11 1180 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 PCDHGC4Q9Y5F7 938 aa6.46□□□□□ -1.38
RNU2-28P-201ENST00000410457 ATXN7O15265 892 aaPredicted RBP6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 IRS1P35568 1242 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 UBAP2LQ14157 1087 aaKnown RBP6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 NAALADL2Q58DX5 795 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 C1orf127Q8N9H9 656 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 SREK1Q8WXA9 508 aaKnown RBP6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 OSBPL7Q9BZF2 842 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 TGIF2Q9GZN2 237 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 NPHS2Q9NP85 383 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 CNTN3Q9P232 1028 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 USP35Q9P2H5 1018 aa6.45□□□□□ -1.38
RNU2-28P-201ENST00000410457 SLC35F4A4IF30 521 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 H7C1W4 665 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 EREGO14944 169 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 THBS1P07996 1170 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 CES1P23141 567 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 CCINQ13939 588 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 TTC39BQ5VTQ0 682 aaPredicted RBP6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 C9orf131Q5VYM1 1079 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 GMCL1Q96IK5 515 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 NUCKS1Q9H1E3 243 aaKnown RBP6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 AAASQ9NRG9 546 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 USP31Q70CQ4 1352 aa6.44□□□□□ -1.38
RNU2-28P-201ENST00000410457 EDN3P14138 238 aa6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 PTSQ03393 145 aa6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 PTPN12Q05209 780 aaKnown RBP6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 TNP2Q05952 138 aa6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 OR13H1Q8NG92 308 aa6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 SUV39H2Q9H5I1 410 aa6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 NDFIP2Q9NV92 336 aa6.43□□□□□ -1.38
RNU2-28P-201ENST00000410457 SASH3O75995 380 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 POLR3DP05423 398 aaPredicted RBP6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 HOXD8P13378 290 aaPredicted RBP6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 SOX18P35713 384 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 SFSWAPQ12872 951 aaKnown RBP6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 TAF1CQ15572 869 aaPredicted RBP6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 KIAA0319Q5VV43 1072 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 RIPOR1Q6ZS17 1223 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 TRIM22Q8IYM9 498 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 KIFC2Q96AC6 838 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 DRC1Q96MC2 740 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 BCO2Q9BYV7 579 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 TRAK1Q9UPV9 953 aa6.42□□□□□ -1.38
RNU2-28P-201ENST00000410457 DCDC2BA2VCK2 349 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 PHF20L1A8MW92 1017 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 KHNYNO15037 678 aaKnown RBP6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 MMP20O60882 483 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 MAP3K6O95382 1288 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 USP17L7P0C7H9 530 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 RARAP10276 462 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 MAPTP10636 758 aaKnown RBP6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 GSTT1P30711 240 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 GRM2Q14416 872 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 NXPE4Q6UWF7 544 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 CCSER2Q9H7U1 834 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 SENP2Q9HC62 589 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 MARK1Q9P0L2 795 aa6.41□□□□□ -1.38
RNU2-28P-201ENST00000410457 ST8SIA5O15466 376 aa6.4□□□□□ -1.38
RNU2-28P-201ENST00000410457 BNIP3LO60238 219 aa6.4□□□□□ -1.38
RNU2-28P-201ENST00000410457 TARSP26639 723 aaKnown RBP6.4□□□□□ -1.38
RNU2-28P-201ENST00000410457 DBN1Q16643 649 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms