RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
MCF2L-210ENST00000409954 USP50Q70EL3 339 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-210ENST00000409954 CACNA1SQ13698 1873 aa18.75■□□□□ 0.59
MCF2L-210ENST00000409954 SCN4AP35499 1836 aa18.74■□□□□ 0.59
MCF2L-210ENST00000409954 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
MCF2L-210ENST00000409954 KIAA2012Q0VF49 1180 aa18.74■□□□□ 0.59
MCF2L-210ENST00000409954 TNIP1Q15025 636 aa18.74■□□□□ 0.59
MCF2L-210ENST00000409954 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-210ENST00000409954 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
MCF2L-210ENST00000409954 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
MCF2L-210ENST00000409954 IRS4O14654 1257 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-210ENST00000409954 EPS15P42566 896 aa18.73■□□□□ 0.59
MCF2L-210ENST00000409954 SCNN1DP51172 638 aa18.73■□□□□ 0.59
MCF2L-210ENST00000409954 CXCL9Q07325 125 aa18.73■□□□□ 0.59
MCF2L-210ENST00000409954 CCDC191Q8NCU4 936 aa18.73■□□□□ 0.59
MCF2L-210ENST00000409954 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
MCF2L-210ENST00000409954 MAP1SQ66K74 1059 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-210ENST00000409954 CIAPIN1Q6FI81 312 aa18.72■□□□□ 0.59
MCF2L-210ENST00000409954 MKRN1Q9UHC7 482 aaKnown RBP18.72■□□□□ 0.59
MCF2L-210ENST00000409954 ADARB2Q9NS39 739 aaKnown RBP18.71■□□□□ 0.59
MCF2L-210ENST00000409954 GPRC5DQ9NZD1 345 aa18.71■□□□□ 0.59
MCF2L-210ENST00000409954 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
MCF2L-210ENST00000409954 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-210ENST00000409954 HSPA1AP0DMV8 641 aaKnown RBP18.7■□□□□ 0.58
MCF2L-210ENST00000409954 HSPA1BP0DMV9 641 aaKnown RBP18.7■□□□□ 0.58
MCF2L-210ENST00000409954 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
MCF2L-210ENST00000409954 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-210ENST00000409954 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
MCF2L-210ENST00000409954 WWC1Q8IX03 1113 aa18.7■□□□□ 0.58
MCF2L-210ENST00000409954 MYD88Q99836 296 aa18.7■□□□□ 0.58
MCF2L-210ENST00000409954 METTL22Q9BUU2 404 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-210ENST00000409954 DEFB115Q30KQ5 88 aa18.69■□□□□ 0.58
MCF2L-210ENST00000409954 CCDC184Q52MB2 194 aa18.69■□□□□ 0.58
MCF2L-210ENST00000409954 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
MCF2L-210ENST00000409954 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
MCF2L-210ENST00000409954 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-210ENST00000409954 CNTNAP1P78357 1384 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-210ENST00000409954 ANP32CO43423 234 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 PDE8AO60658 829 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 COL13A1Q5TAT6 717 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-210ENST00000409954 KSR2Q6VAB6 950 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 EYA3Q99504 573 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 IL16Q14005 1332 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 CDHR2Q9BYE9 1310 aa18.68■□□□□ 0.58
MCF2L-210ENST00000409954 C6orf229H3BNL8 230 aa18.67■□□□□ 0.58
MCF2L-210ENST00000409954 CCDC152Q4G0S7 254 aa18.67■□□□□ 0.58
MCF2L-210ENST00000409954 TSPYL6Q8N831 410 aa18.67■□□□□ 0.58
MCF2L-210ENST00000409954 ZC3H15Q8WU90 426 aaKnown RBP18.67■□□□□ 0.58
MCF2L-210ENST00000409954 COL4A5P29400 1685 aa18.66■□□□□ 0.58
MCF2L-210ENST00000409954 H7C1D1 291 aa18.66■□□□□ 0.58
MCF2L-210ENST00000409954 RAD17O75943 681 aa18.66■□□□□ 0.58
MCF2L-210ENST00000409954 GMPSP49915 693 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-210ENST00000409954 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
MCF2L-210ENST00000409954 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 VEGFBP49765 207 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 GPSM2P81274 684 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 DPF2Q92785 391 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 ZC3H12CQ9C0D7 883 aaKnown RBP18.65■□□□□ 0.58
MCF2L-210ENST00000409954 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 PODXL2Q9NZ53 605 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 POLLQ9UGP5 575 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
MCF2L-210ENST00000409954 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
MCF2L-210ENST00000409954 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
MCF2L-210ENST00000409954 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-210ENST00000409954 WDR63Q8IWG1 891 aa18.64■□□□□ 0.57
MCF2L-210ENST00000409954 TSR2Q969E8 191 aaKnown RBP18.64■□□□□ 0.57
MCF2L-210ENST00000409954 YDJCA8MPS7 323 aa18.63■□□□□ 0.57
MCF2L-210ENST00000409954 RIMBP2O15034 1052 aa18.63■□□□□ 0.57
MCF2L-210ENST00000409954 TBC1D16Q8TBP0 767 aa18.63■□□□□ 0.57
MCF2L-210ENST00000409954 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
MCF2L-210ENST00000409954 ABT1Q9ULW3 272 aaKnown RBP18.63■□□□□ 0.57
MCF2L-210ENST00000409954 ANKRD36CQ5JPF3 1778 aa18.63■□□□□ 0.57
MCF2L-210ENST00000409954 G3V3G9 751 aa18.62■□□□□ 0.57
MCF2L-210ENST00000409954 DCAF8Q5TAQ9 597 aa18.62■□□□□ 0.57
MCF2L-210ENST00000409954 TNS4Q8IZW8 715 aa18.62■□□□□ 0.57
MCF2L-210ENST00000409954 ANKIB1Q9P2G1 1089 aa18.62■□□□□ 0.57
MCF2L-210ENST00000409954 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
MCF2L-210ENST00000409954 CDC37L1Q7L3B6 337 aa18.61■□□□□ 0.57
MCF2L-210ENST00000409954 ANKRD18AQ8IVF6 992 aa18.61■□□□□ 0.57
MCF2L-210ENST00000409954 AIDAQ96BJ3 306 aa18.61■□□□□ 0.57
MCF2L-210ENST00000409954 WDR33Q9C0J8 1336 aaKnown RBP18.6■□□□□ 0.57
MCF2L-210ENST00000409954 PSMD14O00487 310 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 ECE1P42892 770 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-210ENST00000409954 CST9Q5W186 159 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-210ENST00000409954 CDC5LQ99459 802 aaKnown RBP18.6■□□□□ 0.57
MCF2L-210ENST00000409954 DBNDD1Q9H9R9 158 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 WBP1LQ9NX94 342 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 GGA1Q9UJY5 639 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
MCF2L-210ENST00000409954 ECE2O60344 883 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms