RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
TSPAN4-208ENST00000409531 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-208ENST00000409531 PCCAP05165 728 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 HOXA10P31260 410 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 AAMPQ13685 434 aa20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 RPGRQ92834 1020 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 CRBNQ96SW2 442 aa20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 USP44Q9H0E7 712 aa20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-208ENST00000409531 UTYO14607 1347 aa20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 ZBTB7BO15156 539 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 UBTFL1P0CB47 393 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 IRX6P78412 446 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 C7orf43Q8WVR3 580 aa20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
TSPAN4-208ENST00000409531 MYH3P11055 1940 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 COL11A2P13942 1736 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 H7C1W4 665 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 SOGA3Q5TF21 947 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 C3orf67Q6ZVT6 689 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 UBE3BQ7Z3V4 1068 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 RBM17Q96I25 401 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 MEIS3Q99687 375 aa20.72■□□□□ 0.91
TSPAN4-208ENST00000409531 CEP350Q5VT06 3117 aa20.71■□□□□ 0.91
TSPAN4-208ENST00000409531 LAMB2P55268 1798 aa20.71■□□□□ 0.91
TSPAN4-208ENST00000409531 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
TSPAN4-208ENST00000409531 CDHR2Q9BYE9 1310 aa20.7■□□□□ 0.9
TSPAN4-208ENST00000409531 NBPF7P0C2Y1 421 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-208ENST00000409531 NFKBIEO00221 500 aa20.69■□□□□ 0.9
TSPAN4-208ENST00000409531 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-208ENST00000409531 ZBTB40Q9NUA8 1239 aa20.69■□□□□ 0.9
TSPAN4-208ENST00000409531 SLX4Q8IY92 1834 aa20.69■□□□□ 0.9
TSPAN4-208ENST00000409531 GNAI2P04899 355 aa20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 LMNB1P20700 586 aa20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 CASP7P55210 303 aa20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 RASSF7Q02833 373 aa20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 DDX60Q8IY21 1712 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-208ENST00000409531 TNRC6CQ9HCJ0 1690 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-208ENST00000409531 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-208ENST00000409531 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
TSPAN4-208ENST00000409531 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-208ENST00000409531 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
TSPAN4-208ENST00000409531 RTKN2Q8IZC4 609 aa20.66■□□□□ 0.9
TSPAN4-208ENST00000409531 PLA2G12BQ9BX93 195 aa20.66■□□□□ 0.9
TSPAN4-208ENST00000409531 TAOK3Q9H2K8 898 aa20.66■□□□□ 0.9
TSPAN4-208ENST00000409531 LTBP3Q9NS15 1303 aa20.66■□□□□ 0.9
TSPAN4-208ENST00000409531 PDE8AO60658 829 aa20.65■□□□□ 0.9
TSPAN4-208ENST00000409531 BBOX1O75936 387 aa20.65■□□□□ 0.9
TSPAN4-208ENST00000409531 PRELPP51888 382 aa20.65■□□□□ 0.9
TSPAN4-208ENST00000409531 ERICH6BQ5W0A0 696 aa20.65■□□□□ 0.9
TSPAN4-208ENST00000409531 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-208ENST00000409531 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-208ENST00000409531 OLFM4Q6UX06 510 aa20.64■□□□□ 0.89
TSPAN4-208ENST00000409531 SUCLG2Q96I99 432 aa20.64■□□□□ 0.89
TSPAN4-208ENST00000409531 LRRFIP2Q9Y608 721 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-208ENST00000409531 GRIPAP1Q4V328 841 aa20.63■□□□□ 0.89
TSPAN4-208ENST00000409531 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-208ENST00000409531 FKBP4Q02790 459 aaKnown RBP eCLIP20.62■□□□□ 0.893e-6■■■■■ 29.8
TSPAN4-208ENST00000409531 TMX4Q9H1E5 349 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-208ENST00000409531 GPBP1L1Q9HC44 474 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-208ENST00000409531 SBF1O95248 1867 aa20.61■□□□□ 0.89
TSPAN4-208ENST00000409531 GRAPQ13588 217 aa20.61■□□□□ 0.89
TSPAN4-208ENST00000409531 GRAPLQ8TC17 118 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-208ENST00000409531 ZNF526Q8TF50 670 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-208ENST00000409531 BICC1Q9H694 974 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-208ENST00000409531 ATP6V0A2Q9Y487 856 aa20.61■□□□□ 0.89
TSPAN4-208ENST00000409531 ZC3H4Q9UPT8 1303 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 CTSWP56202 376 aa20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 RPAP2Q8IXW5 612 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 C1orf115Q9H7X2 142 aa20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 CACNA1SQ13698 1873 aa20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 FER1L6Q2WGJ9 1857 aa20.6■□□□□ 0.89
TSPAN4-208ENST00000409531 FOXO4P98177 505 aa20.59■□□□□ 0.89
TSPAN4-208ENST00000409531 RABL6Q3YEC7 729 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-208ENST00000409531 SP8Q8IXZ3 490 aa20.59■□□□□ 0.89
TSPAN4-208ENST00000409531 PSMD1Q99460 953 aa20.59■□□□□ 0.89
TSPAN4-208ENST00000409531 MTX1Q13505 466 aa20.58■□□□□ 0.89
TSPAN4-208ENST00000409531 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
TSPAN4-208ENST00000409531 LMBR1LQ6UX01 489 aa20.58■□□□□ 0.89
TSPAN4-208ENST00000409531 TMC4Q7Z404 712 aa20.58■□□□□ 0.89
TSPAN4-208ENST00000409531 HMMRO75330 724 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 CSF1RP07333 972 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 ATP8B2P98198 1209 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 EPHA10Q5JZY3 1008 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 CEP85Q6P2H3 762 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 ANKRD44Q8N8A2 993 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
TSPAN4-208ENST00000409531 HSPA6P17066 643 aa20.56■□□□□ 0.88
TSPAN4-208ENST00000409531 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-208ENST00000409531 CELF1Q92879 486 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-208ENST00000409531 ZNF277Q9NRM2 450 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-208ENST00000409531 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
TSPAN4-208ENST00000409531 RTL9Q8NET4 1388 aa20.56■□□□□ 0.88
TSPAN4-208ENST00000409531 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms