RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 PTH1RQ03431 593 aa23.35■■□□□ 1.33
LIMS2-204ENST00000409286 CUL4AQ13619 759 aa23.35■■□□□ 1.33
LIMS2-204ENST00000409286 INTS5Q6P9B9 1019 aaKnown RBP23.35■■□□□ 1.33
LIMS2-204ENST00000409286 FAM227BQ96M60 508 aa23.35■■□□□ 1.33
LIMS2-204ENST00000409286 CEP126Q9P2H0 1117 aa23.35■■□□□ 1.33
LIMS2-204ENST00000409286 SPATA31A6Q5VVP1 1343 aa23.34■■□□□ 1.33
LIMS2-204ENST00000409286 CCDC171Q6TFL3 1326 aa23.34■■□□□ 1.33
LIMS2-204ENST00000409286 ZNF34Q8IZ26 560 aa23.34■■□□□ 1.33
LIMS2-204ENST00000409286 GPTP24298 496 aa23.33■■□□□ 1.33
LIMS2-204ENST00000409286 IFIT5Q13325 482 aaKnown RBP23.33■■□□□ 1.33
LIMS2-204ENST00000409286 CLEC17AQ6ZS10 378 aa23.33■■□□□ 1.33
LIMS2-204ENST00000409286 MAP4K1Q92918 833 aa23.33■■□□□ 1.33
LIMS2-204ENST00000409286 NGLY1Q96IV0 654 aa23.33■■□□□ 1.33
LIMS2-204ENST00000409286 NEUROD6Q96NK8 337 aa23.33■■□□□ 1.33
LIMS2-204ENST00000409286 RASEFQ8IZ41 740 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 INTS4Q96HW7 963 aaKnown RBP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 PUS3Q9BZE2 481 aaKnown RBP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 TBC1D2BQ9UPU7 963 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 AKAP2Q9Y2D5 859 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 ZNF609O15014 1411 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 A0A0G2JS52 829 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 PTMSP20962 102 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 CRKLP46109 303 aaKnown RBP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 TIMM10P62072 90 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 NECTIN1Q15223 517 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 FNBP4Q8N3X1 1017 aaPredicted RBP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 UPF3BQ9BZI7 483 aaKnown RBP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 TM6SF1Q9BZW5 370 aa23.32■■□□□ 1.32
LIMS2-204ENST00000409286 TRMT112Q9UI30 125 aaKnown RBP23.32■■□□□ 1.32
LIMS2-204ENST00000409286 MED23Q9ULK4 1368 aa23.31■■□□□ 1.32
LIMS2-204ENST00000409286 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
LIMS2-204ENST00000409286 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
LIMS2-204ENST00000409286 A0A0D9SFI3 127 aa23.31■■□□□ 1.32
LIMS2-204ENST00000409286 TAF7LQ5H9L4 462 aa23.31■■□□□ 1.32
LIMS2-204ENST00000409286 AK7Q96M32 723 aa23.31■■□□□ 1.32
LIMS2-204ENST00000409286 ANKRD36CQ5JPF3 1778 aa23.3■■□□□ 1.32
LIMS2-204ENST00000409286 IRS4O14654 1257 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-204ENST00000409286 TTLL11Q8NHH1 800 aa23.3■■□□□ 1.32
LIMS2-204ENST00000409286 C8orf37Q96NL8 207 aa23.3■■□□□ 1.32
LIMS2-204ENST00000409286 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
LIMS2-204ENST00000409286 A0A1B0GUL7 405 aa23.29■■□□□ 1.32
LIMS2-204ENST00000409286 CYP2E1P05181 493 aaPredicted RBP23.29■■□□□ 1.32
LIMS2-204ENST00000409286 CTSWP56202 376 aa23.29■■□□□ 1.32
LIMS2-204ENST00000409286 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
LIMS2-204ENST00000409286 PRPF40BQ6NWY9 871 aaKnown RBP23.29■■□□□ 1.32
LIMS2-204ENST00000409286 EDC3Q96F86 508 aaKnown RBP23.29■■□□□ 1.32
LIMS2-204ENST00000409286 TTC14Q96N46 770 aa23.29■■□□□ 1.32
LIMS2-204ENST00000409286 DNAJC2Q99543 621 aaKnown RBP23.29■■□□□ 1.32
LIMS2-204ENST00000409286 RBM8AQ9Y5S9 174 aaKnown RBP23.29■■□□□ 1.32
LIMS2-204ENST00000409286 PDE8AO60658 829 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
LIMS2-204ENST00000409286 SSFA2P28290 1259 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 ITPK1Q13572 414 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
LIMS2-204ENST00000409286 KBTBD3Q8NAB2 608 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 RREB1Q92766 1687 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 SYNE4Q8N205 404 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 NUP98P52948 1817 aa23.28■■□□□ 1.32
LIMS2-204ENST00000409286 ANKRD18BA2A2Z9 1011 aa23.27■■□□□ 1.32
LIMS2-204ENST00000409286 CREB3L3Q68CJ9 461 aa23.27■■□□□ 1.32
LIMS2-204ENST00000409286 UBN2Q6ZU65 1347 aa23.26■■□□□ 1.31
LIMS2-204ENST00000409286 ITGA6P23229 1130 aa23.26■■□□□ 1.31
LIMS2-204ENST00000409286 KCNJ4P48050 445 aa23.26■■□□□ 1.31
LIMS2-204ENST00000409286 RNF20Q5VTR2 975 aa23.26■■□□□ 1.31
LIMS2-204ENST00000409286 ZSWIM6Q9HCJ5 1215 aa23.26■■□□□ 1.31
LIMS2-204ENST00000409286 PAG1Q9NWQ8 432 aa23.26■■□□□ 1.31
LIMS2-204ENST00000409286 KCNQ2O43526 872 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 TAF5LO75529 589 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 PARP10Q53GL7 1025 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 CERKQ8TCT0 537 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 RIPOR2Q9Y4F9 1068 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 TRAK2O60296 914 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 CAMTA2O94983 1202 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 IFIT1P09914 478 aaKnown RBP23.25■■□□□ 1.31
LIMS2-204ENST00000409286 MCMDC2Q4G0Z9 681 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 CCDC158Q5M9N0 1113 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 CCDC85AQ96PX6 553 aaPredicted RBP23.25■■□□□ 1.31
LIMS2-204ENST00000409286 GREM2Q9H772 168 aa23.25■■□□□ 1.31
LIMS2-204ENST00000409286 SLC27A2O14975 620 aa23.24■■□□□ 1.31
LIMS2-204ENST00000409286 CASTP20810 708 aaKnown RBP23.24■■□□□ 1.31
LIMS2-204ENST00000409286 PSMA5P28066 241 aa23.24■■□□□ 1.31
LIMS2-204ENST00000409286 VPS53Q5VIR6 699 aa23.24■■□□□ 1.31
LIMS2-204ENST00000409286 DDX46Q7L014 1031 aaKnown RBP23.24■■□□□ 1.31
LIMS2-204ENST00000409286 JAKMIP1Q96N16 626 aaKnown RBP23.24■■□□□ 1.31
LIMS2-204ENST00000409286 HMG20BQ9P0W2 317 aa23.24■■□□□ 1.31
LIMS2-204ENST00000409286 CYP46A1Q9Y6A2 500 aa23.24■■□□□ 1.31
LIMS2-204ENST00000409286 TSGA10IPQ3SY00 556 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 USPL1Q5W0Q7 1092 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 ZNF589Q86UQ0 364 aaPredicted RBP23.23■■□□□ 1.31
LIMS2-204ENST00000409286 HELLSQ9NRZ9 838 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 LIMCH1Q9UPQ0 1083 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 NDUFB9Q9Y6M9 179 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 SH3TC1Q8TE82 1336 aa23.23■■□□□ 1.31
LIMS2-204ENST00000409286 GOLGA6L22H0YM25 854 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 GOLIM4O00461 696 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 HSP90B1P14625 803 aaKnown RBP23.22■■□□□ 1.31
LIMS2-204ENST00000409286 AK2P54819 239 aa23.22■■□□□ 1.31
LIMS2-204ENST00000409286 SKOR2Q2VWA4 1001 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms