RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 TCERG1O14776 1098 aaKnown RBP11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 PCCAP05165 728 aaPredicted RBP11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 CCDC152Q4G0S7 254 aa11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 KSR2Q6VAB6 950 aa11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 METTL22Q9BUU2 404 aaPredicted RBP11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
SNORD88A-201ENST00000408314 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
SNORD88A-201ENST00000408314 FANCIQ9NVI1 1328 aa11.63□□□□□ -0.55
SNORD88A-201ENST00000408314 POTECB2RU33 542 aa11.63□□□□□ -0.55
SNORD88A-201ENST00000408314 TAF1DQ9H5J8 278 aaPredicted RBP11.63□□□□□ -0.55
SNORD88A-201ENST00000408314 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
SNORD88A-201ENST00000408314 LRRC37AA6NMS7 1700 aa11.63□□□□□ -0.55
SNORD88A-201ENST00000408314 CDHR2Q9BYE9 1310 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 PDE8AO60658 829 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 KIAA2012Q0VF49 1180 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 TSPYL6Q8N831 410 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 EYA3Q99504 573 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 ZNRF3Q9ULT6 936 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 GJA3Q9Y6H8 435 aa11.62□□□□□ -0.55
SNORD88A-201ENST00000408314 PI4KAP2A4QPH2 592 aa11.61□□□□□ -0.55
SNORD88A-201ENST00000408314 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
SNORD88A-201ENST00000408314 EPHX2P34913 555 aa11.61□□□□□ -0.55
SNORD88A-201ENST00000408314 TNIP1Q15025 636 aa11.61□□□□□ -0.55
SNORD88A-201ENST00000408314 PI4KAP1Q8N8J0 262 aa11.61□□□□□ -0.55
SNORD88A-201ENST00000408314 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
SNORD88A-201ENST00000408314 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 FLIIQ13045 1269 aa11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 AOC3Q16853 763 aa11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 EAPPQ56P03 285 aaPredicted RBP11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
SNORD88A-201ENST00000408314 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 CIAPIN1Q6FI81 312 aa11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 USP50Q70EL3 339 aaPredicted RBP11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 CELF1Q92879 486 aaKnown RBP11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
SNORD88A-201ENST00000408314 C6orf229H3BNL8 230 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 CTSWP56202 376 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 DNAJC5GQ8N7S2 189 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 DNAAF4Q8WXU2 420 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 COL4A5P29400 1685 aa11.58□□□□□ -0.56
SNORD88A-201ENST00000408314 RTL9Q8NET4 1388 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 G3V3G9 751 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 VAMP4O75379 141 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 DCAF8Q5TAQ9 597 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 LINS1Q8NG48 757 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 ANKIB1Q9P2G1 1089 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 DUOX1Q9NRD9 1551 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 XDHP47989 1333 aa11.57□□□□□ -0.56
SNORD88A-201ENST00000408314 ADAMTSL1Q8N6G6 1762 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 MYH3P11055 1940 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 IGKV5-2P06315 115 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 SCNN1DP51172 638 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 CXCL9Q07325 125 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 JMYQ8N9B5 988 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 GGA1Q9UJY5 639 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 PASKQ96RG2 1323 aa11.56□□□□□ -0.56
SNORD88A-201ENST00000408314 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 H7C1D1 291 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 UFL1O94874 794 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 POTEJP0CG39 1038 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 RPS12P25398 132 aaKnown RBP11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 IGHMBP2P38935 993 aaKnown RBP11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 GPSM2P81274 684 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 GCKRQ14397 625 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 UBE3BQ7Z3V4 1068 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 CNTROBQ8N137 903 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 TBC1D16Q8TBP0 767 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 PLA2G12BQ9BX93 195 aa11.55□□□□□ -0.56
SNORD88A-201ENST00000408314 E9PSI1 815 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 H7C1W4 665 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 ATP2B4P23634 1241 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 G2E3Q7L622 706 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 TTLL11Q8NHH1 800 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 DPF2Q92785 391 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 SEC31BQ9NQW1 1179 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 TAF1P21675 1872 aa11.54□□□□□ -0.56
SNORD88A-201ENST00000408314 LTBP1Q14766 1721 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms