RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 SOS2Q07890 1332 aaPredicted RBP20.13■□□□□ 0.81
NUP50-203ENST00000407019 PHF14O94880 888 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 FOXO4P98177 505 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 ST3GAL1Q11201 340 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 NKX1-1Q15270 411 aaPredicted RBP20.13■□□□□ 0.81
NUP50-203ENST00000407019 TTLL7Q6ZT98 887 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 DBNDD2Q9BQY9 259 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 CNPY2Q9Y2B0 182 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 NUP188Q5SRE5 1749 aa20.13■□□□□ 0.81
NUP50-203ENST00000407019 TAF5LO75529 589 aa20.12■□□□□ 0.81
NUP50-203ENST00000407019 ANKRD1Q15327 319 aa20.12■□□□□ 0.81
NUP50-203ENST00000407019 TPCN1Q9ULQ1 816 aa20.12■□□□□ 0.81
NUP50-203ENST00000407019 IL2RBP14784 551 aa20.12■□□□□ 0.81
NUP50-203ENST00000407019 HAUS7Q99871 368 aa20.12■□□□□ 0.81
NUP50-203ENST00000407019 CHMP3Q9Y3E7 222 aa20.12■□□□□ 0.81
NUP50-203ENST00000407019 RPS6KB1P23443 525 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 TSGA10IPQ3SY00 556 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
NUP50-203ENST00000407019 CARD10Q9BWT7 1032 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
NUP50-203ENST00000407019 MTMR6Q9Y217 621 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 A1BGP04217 495 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 USPL1Q5W0Q7 1092 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 TSPY26PQ9H489 355 aa20.11■□□□□ 0.81
NUP50-203ENST00000407019 TJP1Q07157 1748 aa20.1■□□□□ 0.81
NUP50-203ENST00000407019 NECAB1Q8N987 351 aa20.1■□□□□ 0.81
NUP50-203ENST00000407019 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
NUP50-203ENST00000407019 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 CSPP1Q1MSJ5 1256 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 PDLIM2Q96JY6 352 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 ZNF609O15014 1411 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 UBE2HP62256 183 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 KRT32Q14532 448 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 CCDC191Q8NCU4 936 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
NUP50-203ENST00000407019 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 NDUFB9Q9Y6M9 179 aa20.09■□□□□ 0.81
NUP50-203ENST00000407019 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
NUP50-203ENST00000407019 ZBTB3Q9H5J0 574 aa20.08■□□□□ 0.81
NUP50-203ENST00000407019 SLAIN2Q9P270 581 aa20.08■□□□□ 0.81
NUP50-203ENST00000407019 SHANK3Q9BYB0 1731 aa20.08■□□□□ 0.8
NUP50-203ENST00000407019 PDIA4P13667 645 aaKnown RBP20.07■□□□□ 0.8
NUP50-203ENST00000407019 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
NUP50-203ENST00000407019 ATG9AQ7Z3C6 839 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 GPR108Q9NPR9 543 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
NUP50-203ENST00000407019 VPS37CA5D8V6 355 aaPredicted RBP20.07■□□□□ 0.8
NUP50-203ENST00000407019 FIBPO43427 364 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 HS1BP3Q53T59 392 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 CCDC183Q5T5S1 534 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 ZSCAN30Q86W11 494 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 TCEANC2Q96MN5 208 aa20.07■□□□□ 0.8
NUP50-203ENST00000407019 IL15P40933 162 aaPredicted RBP20.06■□□□□ 0.8
NUP50-203ENST00000407019 TOB2Q14106 344 aaPredicted RBP20.06■□□□□ 0.8
NUP50-203ENST00000407019 MCMDC2Q4G0Z9 681 aa20.06■□□□□ 0.8
NUP50-203ENST00000407019 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
NUP50-203ENST00000407019 KBTBD3Q8NAB2 608 aa20.06■□□□□ 0.8
NUP50-203ENST00000407019 TCHHQ07283 1943 aa20.06■□□□□ 0.8
NUP50-203ENST00000407019 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
NUP50-203ENST00000407019 STRN4Q9NRL3 753 aa20.06■□□□□ 0.8
NUP50-203ENST00000407019 SH3TC1Q8TE82 1336 aa20.05■□□□□ 0.8
NUP50-203ENST00000407019 DTNBO60941 627 aa20.05■□□□□ 0.8
NUP50-203ENST00000407019 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
NUP50-203ENST00000407019 RNF214Q8ND24 703 aa20.05■□□□□ 0.8
NUP50-203ENST00000407019 NEUROD6Q96NK8 337 aa20.05■□□□□ 0.8
NUP50-203ENST00000407019 PDCP20941 246 aa20.04■□□□□ 0.8
NUP50-203ENST00000407019 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
NUP50-203ENST00000407019 LARP1BQ659C4 914 aaKnown RBP20.04■□□□□ 0.8
NUP50-203ENST00000407019 EYA2O00167 538 aa20.04■□□□□ 0.8
NUP50-203ENST00000407019 LETM1O95202 739 aaPredicted RBP20.04■□□□□ 0.8
NUP50-203ENST00000407019 EVA1CP58658 441 aa20.04■□□□□ 0.8
NUP50-203ENST00000407019 NEK1Q96PY6 1258 aa20.04■□□□□ 0.8
NUP50-203ENST00000407019 SEC62Q99442 399 aaKnown RBP20.04■□□□□ 0.8
NUP50-203ENST00000407019 ATG3Q9NT62 314 aa20.04■□□□□ 0.8
NUP50-203ENST00000407019 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
NUP50-203ENST00000407019 PAG1Q9NWQ8 432 aa20.03■□□□□ 0.8
NUP50-203ENST00000407019 CIAO1O76071 339 aa20.03■□□□□ 0.8
NUP50-203ENST00000407019 CHGBP05060 677 aa20.03■□□□□ 0.8
NUP50-203ENST00000407019 TICAM2Q86XR7 235 aa20.03■□□□□ 0.8
NUP50-203ENST00000407019 GOLIM4O00461 696 aa20.02■□□□□ 0.8
NUP50-203ENST00000407019 MSNP26038 577 aaKnown RBP20.02■□□□□ 0.8
NUP50-203ENST00000407019 ISCA1Q9BUE6 129 aa20.02■□□□□ 0.8
NUP50-203ENST00000407019 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
NUP50-203ENST00000407019 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.79
NUP50-203ENST00000407019 TIMM10P62072 90 aa20.01■□□□□ 0.79
NUP50-203ENST00000407019 LRRC24Q50LG9 513 aa20.01■□□□□ 0.79
NUP50-203ENST00000407019 HELLSQ9NRZ9 838 aa20.01■□□□□ 0.79
NUP50-203ENST00000407019 CYP21A2P08686 494 aa20.01■□□□□ 0.79
NUP50-203ENST00000407019 CDC37L1Q7L3B6 337 aa20.01■□□□□ 0.79
NUP50-203ENST00000407019 FAM184AQ8NB25 1140 aa20.01■□□□□ 0.79
NUP50-203ENST00000407019 ZNF594Q96JF6 807 aaPredicted RBP20.01■□□□□ 0.79
NUP50-203ENST00000407019 ZNF335Q9H4Z2 1342 aaPredicted RBP20■□□□□ 0.79
NUP50-203ENST00000407019 STK3Q13188 491 aa20■□□□□ 0.79
NUP50-203ENST00000407019 TCIRG1Q13488 830 aa20■□□□□ 0.79
NUP50-203ENST00000407019 NAP1L5Q96NT1 182 aaPredicted RBP20■□□□□ 0.79
NUP50-203ENST00000407019 STRCQ7RTU9 1775 aa20■□□□□ 0.79
NUP50-203ENST00000407019 TPRNQ4KMQ1 711 aa19.99■□□□□ 0.79
NUP50-203ENST00000407019 A0A1B0GUL7 405 aa19.99■□□□□ 0.79
NUP50-203ENST00000407019 KRT85P78386 507 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms