RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 TMEM57Q8N5G2 664 aa21.91■■□□□ 1.1
HDAC11-202ENST00000402259 SLX4Q8IY92 1834 aa21.9■■□□□ 1.1
HDAC11-202ENST00000402259 CSF1RP07333 972 aa21.9■■□□□ 1.1
HDAC11-202ENST00000402259 RLBP1P12271 317 aa21.9■■□□□ 1.1
HDAC11-202ENST00000402259 PDE3AQ14432 1141 aa21.9■■□□□ 1.1
HDAC11-202ENST00000402259 DDX46Q7L014 1031 aaKnown RBP21.9■■□□□ 1.1
HDAC11-202ENST00000402259 TTLL11Q8NHH1 800 aa21.9■■□□□ 1.1
HDAC11-202ENST00000402259 GNAI3P08754 354 aa21.89■■□□□ 1.09
HDAC11-202ENST00000402259 FOXO4P98177 505 aa21.89■■□□□ 1.09
HDAC11-202ENST00000402259 PRPF40BQ6NWY9 871 aaKnown RBP21.89■■□□□ 1.09
HDAC11-202ENST00000402259 BCS1LQ9Y276 419 aa21.89■■□□□ 1.09
HDAC11-202ENST00000402259 DCAF8L1A6NGE4 600 aa21.88■■□□□ 1.09
HDAC11-202ENST00000402259 UBTFL1P0CB47 393 aaPredicted RBP21.88■■□□□ 1.09
HDAC11-202ENST00000402259 PLIN1O60240 522 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 GRIN3BO60391 1043 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 BBOX1O75936 387 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
HDAC11-202ENST00000402259 GRAPQ13588 217 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 GPR162Q16538 588 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 TMC4Q7Z404 712 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 GRAPLQ8TC17 118 aaPredicted RBP21.87■■□□□ 1.09
HDAC11-202ENST00000402259 KAZALD1Q96I82 304 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 SUCLG2Q96I99 432 aa21.87■■□□□ 1.09
HDAC11-202ENST00000402259 RRP1P56182 461 aaKnown RBP21.86■■□□□ 1.09
HDAC11-202ENST00000402259 RABL6Q3YEC7 729 aaPredicted RBP21.86■■□□□ 1.09
HDAC11-202ENST00000402259 SOGA3Q5TF21 947 aa21.86■■□□□ 1.09
HDAC11-202ENST00000402259 PANK1Q8TE04 598 aa21.86■■□□□ 1.09
HDAC11-202ENST00000402259 MEIS3Q99687 375 aa21.86■■□□□ 1.09
HDAC11-202ENST00000402259 TAF1P21675 1872 aa21.86■■□□□ 1.09
HDAC11-202ENST00000402259 EPHA10Q5JZY3 1008 aa21.85■■□□□ 1.09
HDAC11-202ENST00000402259 ITPRIPQ8IWB1 547 aa21.85■■□□□ 1.09
HDAC11-202ENST00000402259 C7orf43Q8WVR3 580 aa21.85■■□□□ 1.09
HDAC11-202ENST00000402259 MVPQ14764 893 aaKnown RBP21.84■■□□□ 1.09
HDAC11-202ENST00000402259 CC2D2BQ6DHV5 1058 aa21.84■■□□□ 1.09
HDAC11-202ENST00000402259 LMBR1LQ6UX01 489 aa21.84■■□□□ 1.09
HDAC11-202ENST00000402259 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
HDAC11-202ENST00000402259 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
HDAC11-202ENST00000402259 GREM2Q9H772 168 aa21.84■■□□□ 1.09
HDAC11-202ENST00000402259 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
HDAC11-202ENST00000402259 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.09
HDAC11-202ENST00000402259 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.09
HDAC11-202ENST00000402259 GRIPAP1Q4V328 841 aa21.83■■□□□ 1.09
HDAC11-202ENST00000402259 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.09
HDAC11-202ENST00000402259 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.09
HDAC11-202ENST00000402259 FER1L6Q2WGJ9 1857 aa21.82■■□□□ 1.08
HDAC11-202ENST00000402259 ZBTB7BO15156 539 aaPredicted RBP21.82■■□□□ 1.08
HDAC11-202ENST00000402259 RPS8P62241 208 aaKnown RBP21.82■■□□□ 1.08
HDAC11-202ENST00000402259 FAM161AQ3B820 660 aa21.82■■□□□ 1.08
HDAC11-202ENST00000402259 ANKRD44Q8N8A2 993 aa21.82■■□□□ 1.08
HDAC11-202ENST00000402259 CELF1Q92879 486 aaKnown RBP21.82■■□□□ 1.08
HDAC11-202ENST00000402259 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
HDAC11-202ENST00000402259 SEC31BQ9NQW1 1179 aa21.82■■□□□ 1.08
HDAC11-202ENST00000402259 COL4A1P02462 1669 aa21.82■■□□□ 1.08
HDAC11-202ENST00000402259 C21orf2O43822 256 aa21.81■■□□□ 1.08
HDAC11-202ENST00000402259 ITGA6P23229 1130 aa21.81■■□□□ 1.08
HDAC11-202ENST00000402259 SP8Q8IXZ3 490 aa21.81■■□□□ 1.08
HDAC11-202ENST00000402259 CCDC85AQ96PX6 553 aaPredicted RBP21.81■■□□□ 1.08
HDAC11-202ENST00000402259 ATP6V0A2Q9Y487 856 aa21.81■■□□□ 1.08
HDAC11-202ENST00000402259 SNED1Q8TER0 1413 aa21.8■■□□□ 1.08
HDAC11-202ENST00000402259 ANKRD18BA2A2Z9 1011 aa21.8■■□□□ 1.08
HDAC11-202ENST00000402259 GNAI2P04899 355 aa21.8■■□□□ 1.08
HDAC11-202ENST00000402259 IFIT5Q13325 482 aaKnown RBP21.8■■□□□ 1.08
HDAC11-202ENST00000402259 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
HDAC11-202ENST00000402259 ANKRD18AQ8IVF6 992 aa21.8■■□□□ 1.08
HDAC11-202ENST00000402259 LRRFIP2Q9Y608 721 aaKnown RBP21.8■■□□□ 1.08
HDAC11-202ENST00000402259 CCDC57Q2TAC2 916 aa21.79■■□□□ 1.08
HDAC11-202ENST00000402259 C20orf194Q5TEA3 1177 aa21.79■■□□□ 1.08
HDAC11-202ENST00000402259 RTKN2Q8IZC4 609 aa21.79■■□□□ 1.08
HDAC11-202ENST00000402259 TMX4Q9H1E5 349 aaPredicted RBP21.79■■□□□ 1.08
HDAC11-202ENST00000402259 COG6Q9Y2V7 657 aa21.79■■□□□ 1.08
HDAC11-202ENST00000402259 MTX1Q13505 466 aa21.78■■□□□ 1.08
HDAC11-202ENST00000402259 BSDC1Q9NW68 430 aaPredicted RBP21.78■■□□□ 1.08
HDAC11-202ENST00000402259 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
HDAC11-202ENST00000402259 SPEF2Q9C093 1822 aa21.78■■□□□ 1.08
HDAC11-202ENST00000402259 LTBP3Q9NS15 1303 aa21.78■■□□□ 1.08
HDAC11-202ENST00000402259 IGHMBP2P38935 993 aaKnown RBP21.77■■□□□ 1.08
HDAC11-202ENST00000402259 ZNF219Q9P2Y4 722 aaPredicted RBP21.76■■□□□ 1.07
HDAC11-202ENST00000402259 ARHGAP27Q6ZUM4 889 aa21.75■■□□□ 1.07
HDAC11-202ENST00000402259 PSMD1Q99460 953 aa21.75■■□□□ 1.07
HDAC11-202ENST00000402259 LTBP1Q14766 1721 aa21.75■■□□□ 1.07
HDAC11-202ENST00000402259 CHD4Q14839 1912 aa21.74■■□□□ 1.07
HDAC11-202ENST00000402259 MPHOSPH8Q99549 860 aa21.74■■□□□ 1.07
HDAC11-202ENST00000402259 ZBTB40Q9NUA8 1239 aa21.74■■□□□ 1.07
HDAC11-202ENST00000402259 SBF1O95248 1867 aa21.74■■□□□ 1.07
HDAC11-202ENST00000402259 NFKBIEO00221 500 aa21.73■■□□□ 1.07
HDAC11-202ENST00000402259 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
HDAC11-202ENST00000402259 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
HDAC11-202ENST00000402259 TAF7LQ5H9L4 462 aa21.73■■□□□ 1.07
HDAC11-202ENST00000402259 OLFM4Q6UX06 510 aa21.73■■□□□ 1.07
HDAC11-202ENST00000402259 TAOK3Q9H2K8 898 aa21.73■■□□□ 1.07
HDAC11-202ENST00000402259 SUPT16HQ9Y5B9 1047 aaKnown RBP21.73■■□□□ 1.07
HDAC11-202ENST00000402259 MPNDQ8N594 471 aa21.72■■□□□ 1.07
HDAC11-202ENST00000402259 RTFDC1Q9BY42 306 aaPredicted RBP21.72■■□□□ 1.07
HDAC11-202ENST00000402259 PODXL2Q9NZ53 605 aa21.72■■□□□ 1.07
HDAC11-202ENST00000402259 LDHAL6AQ6ZMR3 332 aa21.71■■□□□ 1.07
HDAC11-202ENST00000402259 FBXO3Q9UK99 471 aa21.71■■□□□ 1.07
HDAC11-202ENST00000402259 MINPP1Q9UNW1 487 aa21.71■■□□□ 1.07
HDAC11-202ENST00000402259 A0A1B0GUL6 1792 aa21.71■■□□□ 1.07
HDAC11-202ENST00000402259 DUOX1Q9NRD9 1551 aa21.7■■□□□ 1.06
HDAC11-202ENST00000402259 DPP8Q6V1X1 898 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms