RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PTH1RQ03431 593 aa19.36■□□□□ 0.69
SNX6-202ENST00000396526 ATG9AQ7Z3C6 839 aa19.36■□□□□ 0.69
SNX6-202ENST00000396526 DZIP3Q86Y13 1208 aaKnown RBP19.36■□□□□ 0.69
SNX6-202ENST00000396526 PDRG1Q9NUG6 133 aa19.36■□□□□ 0.69
SNX6-202ENST00000396526 HSP90B1P14625 803 aaKnown RBP19.35■□□□□ 0.69
SNX6-202ENST00000396526 GPTP24298 496 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 RASEFQ8IZ41 740 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 SNRKQ9NRH2 765 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 TRMT112Q9UI30 125 aaKnown RBP19.35■□□□□ 0.69
SNX6-202ENST00000396526 ZBTB1Q9Y2K1 713 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 CDHR2Q9BYE9 1310 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 KRT32Q14532 448 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
SNX6-202ENST00000396526 GOLGA6L3A6NEY3 463 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
SNX6-202ENST00000396526 NECTIN1Q15223 517 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 CREB3L3Q68CJ9 461 aa19.35■□□□□ 0.69
SNX6-202ENST00000396526 TIMM10P62072 90 aa19.34■□□□□ 0.69
SNX6-202ENST00000396526 KBTBD3Q8NAB2 608 aa19.34■□□□□ 0.69
SNX6-202ENST00000396526 ISY1Q9ULR0 285 aaKnown RBP19.34■□□□□ 0.69
SNX6-202ENST00000396526 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
SNX6-202ENST00000396526 NLRP10Q86W26 655 aa19.34■□□□□ 0.69
SNX6-202ENST00000396526 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
SNX6-202ENST00000396526 SH2B1Q9NRF2 756 aaPredicted RBP19.34■□□□□ 0.69
SNX6-202ENST00000396526 LRP6O75581 1613 aa19.34■□□□□ 0.69
SNX6-202ENST00000396526 A0A0D9SFI3 127 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 A0A1B0GUL7 405 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 ANKRD18BA2A2Z9 1011 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 KCNB2Q92953 911 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 DDX49Q9Y6V7 483 aaKnown RBP19.33■□□□□ 0.69
SNX6-202ENST00000396526 CYP2E1P05181 493 aaPredicted RBP19.33■□□□□ 0.69
SNX6-202ENST00000396526 MCMDC2Q4G0Z9 681 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 LRRC24Q50LG9 513 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 MCTP1Q6DN14 999 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 BARGINQ6ZT62 677 aa19.33■□□□□ 0.69
SNX6-202ENST00000396526 ATP6V1AP38606 617 aa19.33■□□□□ 0.68
SNX6-202ENST00000396526 PAG1Q9NWQ8 432 aa19.33■□□□□ 0.68
SNX6-202ENST00000396526 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
SNX6-202ENST00000396526 SPATA31A5Q5VU36 1347 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 SPATA31A7Q8IWB4 1347 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 CSF1RP07333 972 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 AK2P54819 239 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 BLOC1S2Q6QNY1 142 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 ZSWIM6Q9HCJ5 1215 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 TTC39AQ5SRH9 613 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 CCDC87Q9NVE4 849 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 IRS4O14654 1257 aaPredicted RBP19.32■□□□□ 0.68
SNX6-202ENST00000396526 DDX46Q7L014 1031 aaKnown RBP19.32■□□□□ 0.68
SNX6-202ENST00000396526 RUFY3Q7L099 469 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 TBC1D2BQ9UPU7 963 aa19.32■□□□□ 0.68
SNX6-202ENST00000396526 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 WDR33Q9C0J8 1336 aaKnown RBP19.31■□□□□ 0.68
SNX6-202ENST00000396526 HLFQ16534 295 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 LDHAL6AQ6ZMR3 332 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNX6-202ENST00000396526 TTC14Q96N46 770 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 SMC3Q9UQE7 1217 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 GOLIM4O00461 696 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 EDC3Q96F86 508 aaKnown RBP19.31■□□□□ 0.68
SNX6-202ENST00000396526 ACSBG1Q96GR2 724 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 CNNM1Q9NRU3 951 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 LTBP4Q8N2S1 1624 aa19.31■□□□□ 0.68
SNX6-202ENST00000396526 SLC27A2O14975 620 aa19.3■□□□□ 0.68
SNX6-202ENST00000396526 PDE8AO60658 829 aa19.3■□□□□ 0.68
SNX6-202ENST00000396526 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
SNX6-202ENST00000396526 SLC4A9Q96Q91 983 aa19.3■□□□□ 0.68
SNX6-202ENST00000396526 METTL24Q5JXM2 366 aa19.3■□□□□ 0.68
SNX6-202ENST00000396526 HELLSQ9NRZ9 838 aa19.3■□□□□ 0.68
SNX6-202ENST00000396526 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 TAF5LO75529 589 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 PDIA4P13667 645 aaKnown RBP19.29■□□□□ 0.68
SNX6-202ENST00000396526 SIK1P57059 783 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 NGLY1Q96IV0 654 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 AK7Q96M32 723 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 MED23Q9ULK4 1368 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 CTSWP56202 376 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 PUS3Q9BZE2 481 aaKnown RBP19.29■□□□□ 0.68
SNX6-202ENST00000396526 NUP188Q5SRE5 1749 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 PHLPP1O60346 1717 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 UBAP1LF5GYI3 381 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 KLHL40Q2TBA0 621 aa19.29■□□□□ 0.68
SNX6-202ENST00000396526 COL16A1Q07092 1604 aaPredicted RBP19.28■□□□□ 0.68
SNX6-202ENST00000396526 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
SNX6-202ENST00000396526 ITGA6P23229 1130 aa19.28■□□□□ 0.68
SNX6-202ENST00000396526 ATP6V1DQ9Y5K8 247 aa19.28■□□□□ 0.68
SNX6-202ENST00000396526 PLCH1Q4KWH8 1693 aa19.28■□□□□ 0.68
SNX6-202ENST00000396526 BRD1O95696 1058 aa19.28■□□□□ 0.68
SNX6-202ENST00000396526 MARCH10Q8NA82 808 aaPredicted RBP19.28■□□□□ 0.68
SNX6-202ENST00000396526 TTLL11Q8NHH1 800 aa19.28■□□□□ 0.68
SNX6-202ENST00000396526 EIF5P55010 431 aaKnown RBP19.27■□□□□ 0.68
SNX6-202ENST00000396526 PARP10Q53GL7 1025 aa19.27■□□□□ 0.68
SNX6-202ENST00000396526 ITGB4P16144 1822 aa19.27■□□□□ 0.68
SNX6-202ENST00000396526 ZFYP08048 801 aaPredicted RBP19.27■□□□□ 0.68
SNX6-202ENST00000396526 ZNF652Q9Y2D9 606 aa19.27■□□□□ 0.68
SNX6-202ENST00000396526 FKBP4Q02790 459 aaKnown RBP eCLIP19.27■□□□□ 0.67
SNX6-202ENST00000396526 PKP1Q13835 747 aa19.27■□□□□ 0.67
SNX6-202ENST00000396526 ATP2B3Q16720 1220 aa19.27■□□□□ 0.67
SNX6-202ENST00000396526 TSGA10IPQ3SY00 556 aa19.27■□□□□ 0.67
SNX6-202ENST00000396526 SH3TC1Q8TE82 1336 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms