RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.27
GABPB1-204ENST00000396464 SCG3Q8WXD2 468 aaKnown RBP7.15□□□□□ -1.27
GABPB1-204ENST00000396464 PPP1R1BQ9UD71 204 aaPredicted RBP7.15□□□□□ -1.27
GABPB1-204ENST00000396464 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-204ENST00000396464 SEC13P55735 322 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 KCNQ4P56696 695 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 LARP1Q6PKG0 1096 aaKnown RBP7.14□□□□□ -1.27
GABPB1-204ENST00000396464 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 CCER1Q8TC90 406 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-204ENST00000396464 UCN2Q96RP3 112 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 MDFIQ99750 246 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 HINFPQ9BQA5 517 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 HIRIP3Q9BW71 556 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-204ENST00000396464 STARD13Q9Y3M8 1113 aa7.14□□□□□ -1.27
GABPB1-204ENST00000396464 RAC1P63000 192 aa7.13□□□□□ -1.27
GABPB1-204ENST00000396464 CDCA8Q53HL2 280 aa7.13□□□□□ -1.27
GABPB1-204ENST00000396464 BTLAQ7Z6A9 289 aa7.13□□□□□ -1.27
GABPB1-204ENST00000396464 GAS2L2Q8NHY3 880 aa7.13□□□□□ -1.27
GABPB1-204ENST00000396464 GRIK4Q16099 956 aa7.12□□□□□ -1.27
GABPB1-204ENST00000396464 PSMD1Q99460 953 aa7.12□□□□□ -1.27
GABPB1-204ENST00000396464 EFCC1Q9HA90 598 aa7.12□□□□□ -1.27
GABPB1-204ENST00000396464 JPH1Q9HDC5 661 aaPredicted RBP7.12□□□□□ -1.27
GABPB1-204ENST00000396464 TPSG1Q9NRR2 321 aa7.12□□□□□ -1.27
GABPB1-204ENST00000396464 C9orf172C9J069 976 aa7.11□□□□□ -1.27
GABPB1-204ENST00000396464 EPB42P16452 691 aa7.11□□□□□ -1.27
GABPB1-204ENST00000396464 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
GABPB1-204ENST00000396464 NAALADL2Q58DX5 795 aa7.11□□□□□ -1.27
GABPB1-204ENST00000396464 GIMAP6Q6P9H5 292 aa7.11□□□□□ -1.27
GABPB1-204ENST00000396464 STAG2Q8N3U4 1231 aa7.11□□□□□ -1.27
GABPB1-204ENST00000396464 TFIP11Q9UBB9 837 aaKnown RBP7.11□□□□□ -1.27
GABPB1-204ENST00000396464 NID1P14543 1247 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 RSPO4Q2I0M5 234 aaPredicted RBP7.1□□□□□ -1.27
GABPB1-204ENST00000396464 NUDT8Q8WV74 236 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 C2orf49Q9BVC5 232 aaPredicted RBP7.1□□□□□ -1.27
GABPB1-204ENST00000396464 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 SLC6A14Q9UN76 642 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 C21orf2O43822 256 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 VAMP1P23763 118 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 POTEAQ6S8J7 498 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 C20orf204Q6ZNR8 217 aa7.1□□□□□ -1.27
GABPB1-204ENST00000396464 NOL8Q76FK4 1167 aaKnown RBP7.1□□□□□ -1.27
GABPB1-204ENST00000396464 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.1□□□□□ -1.27
GABPB1-204ENST00000396464 RGS9O75916 674 aaPredicted RBP7.09□□□□□ -1.28
GABPB1-204ENST00000396464 ELNP15502 786 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.28
GABPB1-204ENST00000396464 CCINQ13939 588 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 COL9A3Q14050 684 aaPredicted RBP7.09□□□□□ -1.28
GABPB1-204ENST00000396464 PCSK7Q16549 785 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 RTN1Q16799 776 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 TAF7LQ5H9L4 462 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 VTI1AQ96AJ9 217 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 DNAJB12Q9NXW2 375 aaKnown RBP7.09□□□□□ -1.28
GABPB1-204ENST00000396464 USP21Q9UK80 565 aa7.09□□□□□ -1.28
GABPB1-204ENST00000396464 TGFBR3LH3BV60 316 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 DYRK3O43781 588 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 RECKO95980 971 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 NFKB1P19838 968 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 IER5Q5VY09 327 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 PHLDB3Q6NSJ2 640 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 PSAPL1Q6NUJ1 521 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 NPAS4Q8IUM7 802 aa7.08□□□□□ -1.28
GABPB1-204ENST00000396464 MAFBQ9Y5Q3 323 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-204ENST00000396464 A0A0A0MRY4 1105 aa7.07□□□□□ -1.28
GABPB1-204ENST00000396464 MARCH6O60337 910 aa7.07□□□□□ -1.28
GABPB1-204ENST00000396464 ITGB7P26010 798 aa7.07□□□□□ -1.28
GABPB1-204ENST00000396464 ZNF662Q6ZS27 426 aa7.07□□□□□ -1.28
GABPB1-204ENST00000396464 DPYDQ12882 1025 aa7.06□□□□□ -1.28
GABPB1-204ENST00000396464 FAM35AQ86V20 835 aa7.06□□□□□ -1.28
GABPB1-204ENST00000396464 TICAM2Q86XR7 235 aa7.06□□□□□ -1.28
GABPB1-204ENST00000396464 GSX2Q9BZM3 304 aa7.06□□□□□ -1.28
GABPB1-204ENST00000396464 SOWAHDA6NJG2 315 aa7.05□□□□□ -1.28
GABPB1-204ENST00000396464 LGR5O75473 907 aa7.05□□□□□ -1.28
GABPB1-204ENST00000396464 DKK1O94907 266 aa7.05□□□□□ -1.28
GABPB1-204ENST00000396464 IGFBP4P22692 258 aa7.05□□□□□ -1.28
GABPB1-204ENST00000396464 ARID4AP29374 1257 aaPredicted RBP7.05□□□□□ -1.28
GABPB1-204ENST00000396464 TXNRD3Q86VQ6 643 aa7.05□□□□□ -1.28
GABPB1-204ENST00000396464 DMRTC2Q8IXT2 367 aaPredicted RBP7.05□□□□□ -1.28
GABPB1-204ENST00000396464 CPB1P15086 417 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 AFF1P51825 1210 aaKnown RBP7.04□□□□□ -1.28
GABPB1-204ENST00000396464 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 ZNF326Q5BKZ1 582 aaKnown RBP7.04□□□□□ -1.28
GABPB1-204ENST00000396464 PRSS36Q5K4E3 855 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 TMEM164Q5U3C3 297 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
GABPB1-204ENST00000396464 DPH6Q7L8W6 267 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
GABPB1-204ENST00000396464 LENG1Q96BZ8 264 aaPredicted RBP7.04□□□□□ -1.28
GABPB1-204ENST00000396464 BCCIPQ9P287 314 aaKnown RBP eCLIP7.04□□□□□ -1.28
GABPB1-204ENST00000396464 ZMIZ1Q9ULJ6 1067 aa7.04□□□□□ -1.28
GABPB1-204ENST00000396464 ANKRD33BA6NCL7 494 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 SELPP16109 830 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 IDH3AP50213 366 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 CRTC2Q53ET0 693 aaPredicted RBP7.03□□□□□ -1.28
GABPB1-204ENST00000396464 ELMSAN1Q6PJG2 1045 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 KRT25Q7Z3Z0 450 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms