RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TTLL11Q8NHH1 800 aa25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 CCDC85AQ96PX6 553 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 MSH5O43196 834 aa25.22■■□□□ 1.63
VCPKMT-202ENST00000395860 FAM161AQ3B820 660 aa25.22■■□□□ 1.63
VCPKMT-202ENST00000395860 NFIXQ14938 502 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 ERFEQ4G0M1 354 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 COL23A1Q86Y22 540 aaPredicted RBP25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 CCDC125Q86Z20 511 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 C16orf71Q8IYS4 520 aaPredicted RBP25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 CARMIL3Q8ND23 1372 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 QSER1Q2KHR3 1735 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 IFIT5Q13325 482 aaKnown RBP25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 TPTE2Q6XPS3 522 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 IL1RAPL2Q9NP60 686 aa25.21■■□□□ 1.63
VCPKMT-202ENST00000395860 STK32BQ9NY57 414 aa25.2■■□□□ 1.62
VCPKMT-202ENST00000395860 GREM2Q9H772 168 aa25.19■■□□□ 1.62
VCPKMT-202ENST00000395860 SLC15A2Q16348 729 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 PNPLA7Q6ZV29 1317 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 ANKRD18BA2A2Z9 1011 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 NPHP1O15259 732 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 ITGA6P23229 1130 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 TAF7LQ5H9L4 462 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 PLEKHM2Q8IWE5 1019 aa25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 ZNF594Q96JF6 807 aaPredicted RBP25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 ANO8Q9HCE9 1232 aaPredicted RBP25.18■■□□□ 1.62
VCPKMT-202ENST00000395860 SASH1O94885 1247 aa25.17■■□□□ 1.62
VCPKMT-202ENST00000395860 OTUD7AQ8TE49 926 aaPredicted RBP25.17■■□□□ 1.62
VCPKMT-202ENST00000395860 SLC10A5Q5PT55 438 aa25.16■■□□□ 1.62
VCPKMT-202ENST00000395860 CCDC152Q4G0S7 254 aa25.16■■□□□ 1.62
VCPKMT-202ENST00000395860 CLASRPQ8N2M8 674 aaKnown RBP25.16■■□□□ 1.62
VCPKMT-202ENST00000395860 ABCC12Q96J65 1359 aa25.15■■□□□ 1.62
VCPKMT-202ENST00000395860 TM4SF1P30408 202 aa25.15■■□□□ 1.62
VCPKMT-202ENST00000395860 EYA2O00167 538 aa25.14■■□□□ 1.62
VCPKMT-202ENST00000395860 CIAO1O76071 339 aa25.13■■□□□ 1.61
VCPKMT-202ENST00000395860 NLGN1Q8N2Q7 840 aa25.13■■□□□ 1.61
VCPKMT-202ENST00000395860 CNBD1Q8NA66 436 aa25.13■■□□□ 1.61
VCPKMT-202ENST00000395860 FBXO3Q9UK99 471 aa25.13■■□□□ 1.61
VCPKMT-202ENST00000395860 SPEF2Q9C093 1822 aa25.13■■□□□ 1.61
VCPKMT-202ENST00000395860 IL15P40933 162 aaPredicted RBP25.13■■□□□ 1.61
VCPKMT-202ENST00000395860 RTL9Q8NET4 1388 aa25.12■■□□□ 1.61
VCPKMT-202ENST00000395860 SERPINB2P05120 415 aa25.12■■□□□ 1.61
VCPKMT-202ENST00000395860 MX1P20591 662 aa25.12■■□□□ 1.61
VCPKMT-202ENST00000395860 LRRC24Q50LG9 513 aa25.12■■□□□ 1.61
VCPKMT-202ENST00000395860 ATG9AQ7Z3C6 839 aa25.12■■□□□ 1.61
VCPKMT-202ENST00000395860 NLRP3Q96P20 1036 aa25.12■■□□□ 1.61
VCPKMT-202ENST00000395860 TFCP2Q12800 502 aa25.11■■□□□ 1.61
VCPKMT-202ENST00000395860 CCDC24Q8N4L8 307 aa25.11■■□□□ 1.61
VCPKMT-202ENST00000395860 PUS3Q9BZE2 481 aaKnown RBP25.11■■□□□ 1.61
VCPKMT-202ENST00000395860 SALL3Q9BXA9 1300 aa25.11■■□□□ 1.61
VCPKMT-202ENST00000395860 PDE1AP54750 535 aa25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 SF3B3Q15393 1217 aaKnown RBP25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 IFIT2P09913 472 aaKnown RBP25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 LDHAL6AQ6ZMR3 332 aa25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 AACSQ86V21 672 aa25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 OSBPL3Q9H4L5 887 aa25.1■■□□□ 1.61
VCPKMT-202ENST00000395860 POLRMTO00411 1230 aaKnown RBP25.09■■□□□ 1.61
VCPKMT-202ENST00000395860 DDR1Q08345 913 aa25.09■■□□□ 1.61
VCPKMT-202ENST00000395860 PRR5LQ6MZQ0 368 aa25.09■■□□□ 1.61
VCPKMT-202ENST00000395860 C3orf67Q6ZVT6 689 aa25.09■■□□□ 1.61
VCPKMT-202ENST00000395860 SEC31BQ9NQW1 1179 aa25.09■■□□□ 1.61
VCPKMT-202ENST00000395860 LRP5O75197 1615 aa25.09■■□□□ 1.61
VCPKMT-202ENST00000395860 ST5P78524 1137 aa25.08■■□□□ 1.61
VCPKMT-202ENST00000395860 BMP2KLQ5H9B9 411 aa25.08■■□□□ 1.61
VCPKMT-202ENST00000395860 TTC22Q5TAA0 569 aa25.08■■□□□ 1.61
VCPKMT-202ENST00000395860 CNNM1Q9NRU3 951 aa25.08■■□□□ 1.61
VCPKMT-202ENST00000395860 TAF1P21675 1872 aa25.08■■□□□ 1.6
VCPKMT-202ENST00000395860 EAF2Q96CJ1 260 aaPredicted RBP25.08■■□□□ 1.6
VCPKMT-202ENST00000395860 STAP2Q9UGK3 403 aa25.07■■□□□ 1.6
VCPKMT-202ENST00000395860 NRXN2Q9P2S2 1712 aa25.07■■□□□ 1.6
VCPKMT-202ENST00000395860 TNNI3KQ59H18 835 aa25.06■■□□□ 1.6
VCPKMT-202ENST00000395860 CDC5LQ99459 802 aaKnown RBP25.06■■□□□ 1.6
VCPKMT-202ENST00000395860 CEP126Q9P2H0 1117 aa25.06■■□□□ 1.6
VCPKMT-202ENST00000395860 FPGT-TNNI3KV9GXZ4 949 aa25.06■■□□□ 1.6
VCPKMT-202ENST00000395860 RIC1Q4ADV7 1423 aa25.06■■□□□ 1.6
VCPKMT-202ENST00000395860 IGHMBP2P38935 993 aaKnown RBP25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 TSHZ3Q63HK5 1081 aa25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 MPHOSPH8Q99549 860 aa25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 CCDC8Q9H0W5 538 aaPredicted RBP25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 RIPOR2Q9Y4F9 1068 aa25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 AOX1Q06278 1338 aa25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 MSL1Q68DK7 614 aa25.05■■□□□ 1.6
VCPKMT-202ENST00000395860 GSPT1P15170 499 aaKnown RBP25.04■■□□□ 1.6
VCPKMT-202ENST00000395860 C8orf34Q49A92 452 aa25.04■■□□□ 1.6
VCPKMT-202ENST00000395860 GPATCH3Q96I76 525 aa25.04■■□□□ 1.6
VCPKMT-202ENST00000395860 GPR108Q9NPR9 543 aa25.04■■□□□ 1.6
VCPKMT-202ENST00000395860 TTC41PQ6P2S7 1318 aa25.04■■□□□ 1.6
VCPKMT-202ENST00000395860 METTL24Q5JXM2 366 aa25.03■■□□□ 1.6
VCPKMT-202ENST00000395860 BACH2Q9BYV9 841 aa25.03■■□□□ 1.6
VCPKMT-202ENST00000395860 PARP3Q9Y6F1 533 aa25.03■■□□□ 1.6
VCPKMT-202ENST00000395860 MMP10P09238 476 aa25.03■■□□□ 1.6
VCPKMT-202ENST00000395860 COL4A1P02462 1669 aa25.02■■□□□ 1.6
VCPKMT-202ENST00000395860 ANKRD18AQ8IVF6 992 aa25.02■■□□□ 1.6
VCPKMT-202ENST00000395860 ZNF609O15014 1411 aa25.01■■□□□ 1.59
VCPKMT-202ENST00000395860 UPF1Q92900 1129 aaKnown RBP eCLIP25.01■■□□□ 1.59
VCPKMT-202ENST00000395860 TSHZ2Q9NRE2 1034 aa25.01■■□□□ 1.59
VCPKMT-202ENST00000395860 ECHDC1Q9NTX5 307 aa25.01■■□□□ 1.59
VCPKMT-202ENST00000395860 TLR7Q9NYK1 1049 aaKnown RBP25.01■■□□□ 1.59
VCPKMT-202ENST00000395860 AKAP2Q9Y2D5 859 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms