RNA–Protein interactions for RNA: ENST00000394738.7

RFT1-202, Transcript of RFT1 homolog, humanhuman

TSL 5 BASIC

Gene RFT1, Length 1,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-202ENST00000394738 AAMPQ13685 434 aa25.51■■□□□ 1.67
RFT1-202ENST00000394738 PNMA6EA0A0J9YXQ4 647 aa25.51■■□□□ 1.67
RFT1-202ENST00000394738 SF3B3Q15393 1217 aaKnown RBP25.51■■□□□ 1.67
RFT1-202ENST00000394738 FAM161AQ3B820 660 aa25.51■■□□□ 1.67
RFT1-202ENST00000394738 GREM2Q9H772 168 aa25.51■■□□□ 1.67
RFT1-202ENST00000394738 PPP1R1BQ9UD71 204 aaPredicted RBP25.51■■□□□ 1.67
RFT1-202ENST00000394738 PDE6BP35913 854 aa25.5■■□□□ 1.67
RFT1-202ENST00000394738 KLHL34Q8N239 644 aa25.5■■□□□ 1.67
RFT1-202ENST00000394738 ATP8B2P98198 1209 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 CACNA1SQ13698 1873 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 SRCAPQ6ZRS2 3230 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 SPEF2Q9C093 1822 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 KLRG2A4D1S0 409 aaPredicted RBP25.49■■□□□ 1.67
RFT1-202ENST00000394738 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 SEC31BQ9NQW1 1179 aa25.49■■□□□ 1.67
RFT1-202ENST00000394738 MTX1Q13505 466 aa25.48■■□□□ 1.67
RFT1-202ENST00000394738 CRY2Q49AN0 593 aa25.48■■□□□ 1.67
RFT1-202ENST00000394738 RPAP2Q8IXW5 612 aaPredicted RBP25.48■■□□□ 1.67
RFT1-202ENST00000394738 COL4A1P02462 1669 aa25.47■■□□□ 1.67
RFT1-202ENST00000394738 CHRNA5P30532 468 aa25.47■■□□□ 1.67
RFT1-202ENST00000394738 C2CD5Q86YS7 1000 aa25.47■■□□□ 1.67
RFT1-202ENST00000394738 ITGA6P23229 1130 aa25.47■■□□□ 1.67
RFT1-202ENST00000394738 KIAA1551Q9HCM1 1747 aa25.46■■□□□ 1.67
RFT1-202ENST00000394738 RPGRQ92834 1020 aaKnown RBP25.46■■□□□ 1.67
RFT1-202ENST00000394738 SRGNP10124 158 aa25.45■■□□□ 1.66
RFT1-202ENST00000394738 IFIT5Q13325 482 aaKnown RBP25.45■■□□□ 1.66
RFT1-202ENST00000394738 CCDC57Q2TAC2 916 aa25.45■■□□□ 1.66
RFT1-202ENST00000394738 KLHDC4Q8TBB5 520 aa25.45■■□□□ 1.66
RFT1-202ENST00000394738 ZNF594Q96JF6 807 aaPredicted RBP25.45■■□□□ 1.66
RFT1-202ENST00000394738 DLEC1Q9Y238 1755 aa25.45■■□□□ 1.66
RFT1-202ENST00000394738 H0YIN7 160 aa25.44■■□□□ 1.66
RFT1-202ENST00000394738 ANKRD18BA2A2Z9 1011 aa25.44■■□□□ 1.66
RFT1-202ENST00000394738 RFX5P48382 616 aaPredicted RBP25.44■■□□□ 1.66
RFT1-202ENST00000394738 DDX46Q7L014 1031 aaKnown RBP25.44■■□□□ 1.66
RFT1-202ENST00000394738 SSH3Q8TE77 659 aa25.44■■□□□ 1.66
RFT1-202ENST00000394738 RTL9Q8NET4 1388 aa25.43■■□□□ 1.66
RFT1-202ENST00000394738 POLA2Q14181 598 aa25.43■■□□□ 1.66
RFT1-202ENST00000394738 PA2G4Q9UQ80 394 aaKnown RBP25.43■■□□□ 1.66
RFT1-202ENST00000394738 CD2APQ9Y5K6 639 aa25.43■■□□□ 1.66
RFT1-202ENST00000394738 A0A0G2JLW4 131 aa25.42■■□□□ 1.66
RFT1-202ENST00000394738 NPR1P16066 1061 aa25.42■■□□□ 1.66
RFT1-202ENST00000394738 ZNF622Q969S3 477 aaKnown RBP eCLIP25.42■■□□□ 1.66
RFT1-202ENST00000394738 RBM17Q96I25 401 aaKnown RBP25.42■■□□□ 1.66
RFT1-202ENST00000394738 DPEP1P16444 411 aa25.42■■□□□ 1.66
RFT1-202ENST00000394738 CELF1Q92879 486 aaKnown RBP25.42■■□□□ 1.66
RFT1-202ENST00000394738 MASTLQ96GX5 879 aa25.42■■□□□ 1.66
RFT1-202ENST00000394738 HOXA10P31260 410 aaPredicted RBP25.41■■□□□ 1.66
RFT1-202ENST00000394738 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
RFT1-202ENST00000394738 ERICH6BQ5W0A0 696 aa25.41■■□□□ 1.66
RFT1-202ENST00000394738 TGFB2P61812 414 aa25.4■■□□□ 1.66
RFT1-202ENST00000394738 TAF7LQ5H9L4 462 aa25.4■■□□□ 1.66
RFT1-202ENST00000394738 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
RFT1-202ENST00000394738 GOLGB1Q14789 3259 aaKnown RBP25.4■■□□□ 1.66
RFT1-202ENST00000394738 HMMRO75330 724 aa25.4■■□□□ 1.66
RFT1-202ENST00000394738 FHDC1Q9C0D6 1143 aaPredicted RBP25.4■■□□□ 1.66
RFT1-202ENST00000394738 KCNA3P22001 575 aa25.39■■□□□ 1.65
RFT1-202ENST00000394738 CDC5LQ99459 802 aaKnown RBP25.39■■□□□ 1.65
RFT1-202ENST00000394738 SIL1Q9H173 461 aa25.39■■□□□ 1.65
RFT1-202ENST00000394738 BRCA1P38398 1863 aaKnown RBP25.38■■□□□ 1.65
RFT1-202ENST00000394738 IGHDP01880 384 aa25.38■■□□□ 1.65
RFT1-202ENST00000394738 GRAPQ13588 217 aa25.38■■□□□ 1.65
RFT1-202ENST00000394738 STYK1Q6J9G0 422 aa25.38■■□□□ 1.65
RFT1-202ENST00000394738 NLGN2Q8NFZ4 835 aa25.38■■□□□ 1.65
RFT1-202ENST00000394738 GRAPLQ8TC17 118 aaPredicted RBP25.38■■□□□ 1.65
RFT1-202ENST00000394738 CRAMP1Q96RY5 1269 aa25.38■■□□□ 1.65
RFT1-202ENST00000394738 SLX4Q8IY92 1834 aa25.38■■□□□ 1.65
RFT1-202ENST00000394738 RPS8P62241 208 aaKnown RBP25.37■■□□□ 1.65
RFT1-202ENST00000394738 ANKRD18AQ8IVF6 992 aa25.37■■□□□ 1.65
RFT1-202ENST00000394738 COPRSQ9NQ92 184 aa25.37■■□□□ 1.65
RFT1-202ENST00000394738 LRP5O75197 1615 aa25.37■■□□□ 1.65
RFT1-202ENST00000394738 HDAC1Q13547 482 aaPredicted RBP25.37■■□□□ 1.65
RFT1-202ENST00000394738 PUS3Q9BZE2 481 aaKnown RBP25.37■■□□□ 1.65
RFT1-202ENST00000394738 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
RFT1-202ENST00000394738 SURF6O75683 361 aaKnown RBP25.36■■□□□ 1.65
RFT1-202ENST00000394738 ALDH1B1P30837 517 aa25.36■■□□□ 1.65
RFT1-202ENST00000394738 IGHMBP2P38935 993 aaKnown RBP25.36■■□□□ 1.65
RFT1-202ENST00000394738 WWC3Q9ULE0 1092 aa25.36■■□□□ 1.65
RFT1-202ENST00000394738 LRRC24Q50LG9 513 aa25.35■■□□□ 1.65
RFT1-202ENST00000394738 SLC51AQ86UW1 340 aa25.35■■□□□ 1.65
RFT1-202ENST00000394738 MPHOSPH8Q99549 860 aa25.35■■□□□ 1.65
RFT1-202ENST00000394738 RWDD1Q9H446 243 aaPredicted RBP25.35■■□□□ 1.65
RFT1-202ENST00000394738 EXOC6BQ9Y2D4 811 aa25.35■■□□□ 1.65
RFT1-202ENST00000394738 LDHAL6AQ6ZMR3 332 aa25.35■■□□□ 1.65
RFT1-202ENST00000394738 PPP4R2Q9NY27 417 aa25.35■■□□□ 1.65
RFT1-202ENST00000394738 B4GALNT3Q6L9W6 998 aa25.34■■□□□ 1.65
RFT1-202ENST00000394738 CNKSR1Q969H4 720 aa25.33■■□□□ 1.65
RFT1-202ENST00000394738 CCDC136Q96JN2 1154 aa25.33■■□□□ 1.65
RFT1-202ENST00000394738 SYT17Q9BSW7 474 aa25.33■■□□□ 1.65
RFT1-202ENST00000394738 CNNM1Q9NRU3 951 aa25.33■■□□□ 1.65
RFT1-202ENST00000394738 EYA2O00167 538 aa25.32■■□□□ 1.64
RFT1-202ENST00000394738 BBOX1O75936 387 aa25.32■■□□□ 1.64
RFT1-202ENST00000394738 PRPF40BQ6NWY9 871 aaKnown RBP25.32■■□□□ 1.64
RFT1-202ENST00000394738 DCTPP1Q9H773 170 aa25.32■■□□□ 1.64
RFT1-202ENST00000394738 BSDC1Q9NW68 430 aaPredicted RBP25.32■■□□□ 1.64
RFT1-202ENST00000394738 NOP58Q9Y2X3 529 aaKnown RBP25.32■■□□□ 1.64
RFT1-202ENST00000394738 A0A1B0GUL6 1792 aa25.32■■□□□ 1.64
RFT1-202ENST00000394738 APBB1O00213 710 aa25.31■■□□□ 1.64
RFT1-202ENST00000394738 PPEF1O14829 653 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms