RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 AOPEPQ8N6M6 819 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 NLRP2Q9NX02 1062 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 IGSF1Q8N6C5 1336 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 PSMA5P28066 241 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 POLA2Q14181 598 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 DBNDD2Q9BQY9 259 aa19.73■□□□□ 0.75
SIPA1-201ENST00000394224 FUCA2Q9BTY2 467 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 SH2B1Q9NRF2 756 aaPredicted RBP19.72■□□□□ 0.75
SIPA1-201ENST00000394224 DBF4Q9UBU7 674 aaPredicted RBP19.72■□□□□ 0.75
SIPA1-201ENST00000394224 GRM8O00222 908 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 CSB-PGBD3P0DP91 1061 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 FKBP4Q02790 459 aaKnown RBP eCLIP19.72■□□□□ 0.75
SIPA1-201ENST00000394224 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
SIPA1-201ENST00000394224 TTLL5Q6EMB2 1281 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 ZNF75DP51815 510 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 SMAP1Q8IYB5 467 aaPredicted RBP19.72■□□□□ 0.75
SIPA1-201ENST00000394224 XAGE3Q8WTP9 111 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 ZSCAN31Q96LW9 406 aaPredicted RBP19.72■□□□□ 0.75
SIPA1-201ENST00000394224 USP6P35125 1406 aa19.72■□□□□ 0.75
SIPA1-201ENST00000394224 NCBP1Q09161 790 aaKnown RBP19.71■□□□□ 0.75
SIPA1-201ENST00000394224 DDX17Q92841 729 aaKnown RBP19.71■□□□□ 0.75
SIPA1-201ENST00000394224 CHMP4CQ96CF2 233 aa19.71■□□□□ 0.75
SIPA1-201ENST00000394224 NEK1Q96PY6 1258 aa19.71■□□□□ 0.75
SIPA1-201ENST00000394224 ZNF215Q9UL58 517 aaPredicted RBP19.71■□□□□ 0.75
SIPA1-201ENST00000394224 ATP2B1P20020 1258 aa19.71■□□□□ 0.75
SIPA1-201ENST00000394224 CEP135Q66GS9 1140 aa19.71■□□□□ 0.75
SIPA1-201ENST00000394224 HOMER1Q86YM7 354 aa19.71■□□□□ 0.75
SIPA1-201ENST00000394224 CCAR2Q8N163 923 aaKnown RBP19.71■□□□□ 0.75
SIPA1-201ENST00000394224 PODXL2Q9NZ53 605 aa19.71■□□□□ 0.75
SIPA1-201ENST00000394224 PLEKHG3A1L390 1219 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 RPS6KB1P23443 525 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 ELF2Q15723 593 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 KINO60870 393 aaKnown RBP19.7■□□□□ 0.74
SIPA1-201ENST00000394224 CCDC73Q6ZRK6 1079 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 CCDC82Q8N4S0 544 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 NFATC2IPQ8NCF5 419 aa19.7■□□□□ 0.74
SIPA1-201ENST00000394224 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
SIPA1-201ENST00000394224 DIP2CQ9Y2E4 1556 aa19.69■□□□□ 0.74
SIPA1-201ENST00000394224 PDCP20941 246 aa19.69■□□□□ 0.74
SIPA1-201ENST00000394224 SCAND2PQ9GZW5 306 aaPredicted RBP19.69■□□□□ 0.74
SIPA1-201ENST00000394224 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
SIPA1-201ENST00000394224 SBNO1A3KN83 1393 aa19.69■□□□□ 0.74
SIPA1-201ENST00000394224 MARCKSP29966 332 aaPredicted RBP19.69■□□□□ 0.74
SIPA1-201ENST00000394224 NEXNQ0ZGT2 675 aa19.69■□□□□ 0.74
SIPA1-201ENST00000394224 WASHC4Q2M389 1173 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 USP28Q96RU2 1077 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 PTPN14Q15678 1187 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 CREBRFQ8IUR6 639 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 MAP4K1Q92918 833 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 KIF20BQ96Q89 1820 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 CCDC69A6NI79 296 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 GTF3C6Q969F1 213 aa19.68■□□□□ 0.74
SIPA1-201ENST00000394224 TSPOAP1O95153 1857 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 LMOD1P29536 600 aaPredicted RBP19.67■□□□□ 0.74
SIPA1-201ENST00000394224 SCRN1Q12765 414 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 KSR2Q6VAB6 950 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 ADCY9O60503 1353 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 CYP21A2P08686 494 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 CABLES1Q8TDN4 633 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 KAZALD1Q96I82 304 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 EPC1Q9H2F5 836 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 GOLPH3LQ9H4A5 285 aa19.67■□□□□ 0.74
SIPA1-201ENST00000394224 DMTNQ08495 405 aa19.66■□□□□ 0.74
SIPA1-201ENST00000394224 TMEM87AQ8NBN3 555 aa19.66■□□□□ 0.74
SIPA1-201ENST00000394224 DBNLQ9UJU6 430 aaKnown RBP19.66■□□□□ 0.74
SIPA1-201ENST00000394224 TMC6Q7Z403 805 aa19.66■□□□□ 0.74
SIPA1-201ENST00000394224 SPTLC3Q9NUV7 552 aa19.66■□□□□ 0.74
SIPA1-201ENST00000394224 A0A087WZG4 1122 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 ZSWIM4Q9H7M6 989 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 DLC1Q96QB1 1528 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 NEURL4Q96JN8 1562 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 VGLL3A8MV65 326 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 POLR3GO15318 223 aaPredicted RBP19.65■□□□□ 0.74
SIPA1-201ENST00000394224 ARHGAP31Q2M1Z3 1444 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 SPECC1Q5M775 1068 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 NPHP3Q7Z494 1330 aa19.65■□□□□ 0.74
SIPA1-201ENST00000394224 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.74
SIPA1-201ENST00000394224 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.74
SIPA1-201ENST00000394224 CHRNA2Q15822 529 aa19.64■□□□□ 0.74
SIPA1-201ENST00000394224 LRRN4CLQ8ND94 238 aa19.64■□□□□ 0.74
SIPA1-201ENST00000394224 CLSTN2Q9H4D0 955 aa19.64■□□□□ 0.74
SIPA1-201ENST00000394224 TTC41PQ6P2S7 1318 aa19.64■□□□□ 0.73
SIPA1-201ENST00000394224 ARHGEF10O15013 1369 aa19.64■□□□□ 0.73
SIPA1-201ENST00000394224 TAF5LO75529 589 aa19.64■□□□□ 0.73
SIPA1-201ENST00000394224 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.73
SIPA1-201ENST00000394224 SYT10Q6XYQ8 523 aa19.64■□□□□ 0.73
SIPA1-201ENST00000394224 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
SIPA1-201ENST00000394224 GNL2Q13823 731 aaKnown RBP19.63■□□□□ 0.73
SIPA1-201ENST00000394224 LMBR1LQ6UX01 489 aa19.63■□□□□ 0.73
SIPA1-201ENST00000394224 ZBTB3Q9H5J0 574 aa19.63■□□□□ 0.73
SIPA1-201ENST00000394224 GOLGB1Q14789 3259 aaKnown RBP19.63■□□□□ 0.73
SIPA1-201ENST00000394224 SKIDA1Q1XH10 827 aa19.63■□□□□ 0.73
SIPA1-201ENST00000394224 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
SIPA1-201ENST00000394224 APPP05067 770 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 ERCC6LQ2NKX8 1250 aa19.62■□□□□ 0.73
SIPA1-201ENST00000394224 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
SIPA1-201ENST00000394224 IFNKQ9P0W0 207 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms