RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 RABEP1Q15276 862 aa21.78■■□□□ 1.08
CLDND1-204ENST00000394185 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
CLDND1-204ENST00000394185 COL5A3P25940 1745 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-204ENST00000394185 SUSD4Q5VX71 490 aa21.78■■□□□ 1.08
CLDND1-204ENST00000394185 NEUROD6Q96NK8 337 aa21.77■■□□□ 1.08
CLDND1-204ENST00000394185 DIAPH3Q9NSV4 1193 aa21.77■■□□□ 1.08
CLDND1-204ENST00000394185 CTSWP56202 376 aa21.77■■□□□ 1.07
CLDND1-204ENST00000394185 IFIT5Q13325 482 aaKnown RBP21.76■■□□□ 1.07
CLDND1-204ENST00000394185 NFKBIBQ15653 356 aa21.76■■□□□ 1.07
CLDND1-204ENST00000394185 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
CLDND1-204ENST00000394185 K7ELQ4 463 aaPredicted RBP21.75■■□□□ 1.07
CLDND1-204ENST00000394185 CIAO1O76071 339 aa21.75■■□□□ 1.07
CLDND1-204ENST00000394185 ATP5JP18859 108 aa21.75■■□□□ 1.07
CLDND1-204ENST00000394185 ITGA6P23229 1130 aa21.75■■□□□ 1.07
CLDND1-204ENST00000394185 LSG1Q9H089 658 aaKnown RBP21.75■■□□□ 1.07
CLDND1-204ENST00000394185 FOXD4L1Q9NU39 408 aa21.75■■□□□ 1.07
CLDND1-204ENST00000394185 CHGBP05060 677 aa21.75■■□□□ 1.07
CLDND1-204ENST00000394185 BTAF1O14981 1849 aa21.75■■□□□ 1.07
CLDND1-204ENST00000394185 HCLS1P14317 486 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-204ENST00000394185 ZNF609O15014 1411 aa21.74■■□□□ 1.07
CLDND1-204ENST00000394185 ATRNO75882 1429 aa21.74■■□□□ 1.07
CLDND1-204ENST00000394185 TAF7LQ5H9L4 462 aa21.74■■□□□ 1.07
CLDND1-204ENST00000394185 SEPT12Q8IYM1 358 aa21.74■■□□□ 1.07
CLDND1-204ENST00000394185 DNAJC2Q99543 621 aaKnown RBP21.74■■□□□ 1.07
CLDND1-204ENST00000394185 FSD1Q9BTV5 496 aa21.74■■□□□ 1.07
CLDND1-204ENST00000394185 A0A1B0GUL7 405 aa21.73■■□□□ 1.07
CLDND1-204ENST00000394185 NMIQ13287 307 aaPredicted RBP21.73■■□□□ 1.07
CLDND1-204ENST00000394185 RAD50Q92878 1312 aa21.73■■□□□ 1.07
CLDND1-204ENST00000394185 TRPC5Q9UL62 973 aaPredicted RBP21.72■■□□□ 1.07
CLDND1-204ENST00000394185 NIP7Q9Y221 180 aaKnown RBP eCLIP21.72■■□□□ 1.07
CLDND1-204ENST00000394185 A0A0D9SFI3 127 aa21.72■■□□□ 1.07
CLDND1-204ENST00000394185 PDE8AO60658 829 aa21.72■■□□□ 1.07
CLDND1-204ENST00000394185 PTH1RQ03431 593 aa21.72■■□□□ 1.07
CLDND1-204ENST00000394185 GPR108Q9NPR9 543 aa21.72■■□□□ 1.07
CLDND1-204ENST00000394185 NHSQ6T4R5 1651 aa21.72■■□□□ 1.07
CLDND1-204ENST00000394185 ONECUT3O60422 494 aaPredicted RBP21.71■■□□□ 1.07
CLDND1-204ENST00000394185 FRAT2O75474 233 aaPredicted RBP21.71■■□□□ 1.07
CLDND1-204ENST00000394185 HSPA4P34932 840 aa21.71■■□□□ 1.07
CLDND1-204ENST00000394185 CEP126Q9P2H0 1117 aa21.71■■□□□ 1.07
CLDND1-204ENST00000394185 DDX46Q7L014 1031 aaKnown RBP21.71■■□□□ 1.07
CLDND1-204ENST00000394185 AMIGO3Q86WK7 504 aa21.71■■□□□ 1.07
CLDND1-204ENST00000394185 ZNF831Q5JPB2 1677 aa21.7■■□□□ 1.07
CLDND1-204ENST00000394185 RIC1Q4ADV7 1423 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 MCCP23508 829 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 ADORA1P30542 326 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 HAUS7Q99871 368 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 UTP14AQ9BVJ6 771 aaKnown RBP21.7■■□□□ 1.06
CLDND1-204ENST00000394185 SH3TC1Q8TE82 1336 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 MYH3P11055 1940 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 DDIT3P35638 169 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 LDHAL6AQ6ZMR3 332 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 QTRT2Q9H974 415 aaKnown RBP21.7■■□□□ 1.06
CLDND1-204ENST00000394185 RIPOR2Q9Y4F9 1068 aa21.7■■□□□ 1.06
CLDND1-204ENST00000394185 ANKRD18BA2A2Z9 1011 aa21.69■■□□□ 1.06
CLDND1-204ENST00000394185 NTSR2O95665 410 aa21.69■■□□□ 1.06
CLDND1-204ENST00000394185 NEK4P51957 841 aa21.69■■□□□ 1.06
CLDND1-204ENST00000394185 RASEFQ8IZ41 740 aa21.69■■□□□ 1.06
CLDND1-204ENST00000394185 RUFY2Q8WXA3 655 aa21.69■■□□□ 1.06
CLDND1-204ENST00000394185 CCNL1Q9UK58 526 aaPredicted RBP21.69■■□□□ 1.06
CLDND1-204ENST00000394185 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
CLDND1-204ENST00000394185 KIAA1211Q6ZU35 1233 aa21.68■■□□□ 1.06
CLDND1-204ENST00000394185 UPF3BQ9BZI7 483 aaKnown RBP21.68■■□□□ 1.06
CLDND1-204ENST00000394185 ST18O60284 1047 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 ANAPC15P60006 121 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 ZNF589Q86UQ0 364 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-204ENST00000394185 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 HSP90AA1P07900 732 aaKnown RBP21.67■■□□□ 1.06
CLDND1-204ENST00000394185 SLFNL1Q499Z3 407 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 PARP10Q53GL7 1025 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 XAGE2Q96GT9 111 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 SEC31BQ9NQW1 1179 aa21.67■■□□□ 1.06
CLDND1-204ENST00000394185 GOLIM4O00461 696 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 GNPATO15228 680 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 METTL24Q5JXM2 366 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 BCL2L12Q9HB09 334 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 CNNM1Q9NRU3 951 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
CLDND1-204ENST00000394185 SNX14Q9Y5W7 946 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
CLDND1-204ENST00000394185 EPB41L2O43491 1005 aaKnown RBP21.65■■□□□ 1.06
CLDND1-204ENST00000394185 BICDL1Q6ZP65 573 aa21.65■■□□□ 1.06
CLDND1-204ENST00000394185 IL17RAQ96F46 866 aa21.65■■□□□ 1.06
CLDND1-204ENST00000394185 HIP1O00291 1037 aa21.65■■□□□ 1.06
CLDND1-204ENST00000394185 SBF2Q86WG5 1849 aa21.65■■□□□ 1.06
CLDND1-204ENST00000394185 CCDC171Q6TFL3 1326 aa21.64■■□□□ 1.06
CLDND1-204ENST00000394185 VGLL2Q8N8G2 317 aa21.64■■□□□ 1.06
CLDND1-204ENST00000394185 SEC62Q99442 399 aaKnown RBP21.64■■□□□ 1.06
CLDND1-204ENST00000394185 CHMP5Q9NZZ3 219 aa21.64■■□□□ 1.06
CLDND1-204ENST00000394185 ZNF652Q9Y2D9 606 aa21.64■■□□□ 1.06
CLDND1-204ENST00000394185 DDX60Q8IY21 1712 aaKnown RBP21.64■■□□□ 1.06
CLDND1-204ENST00000394185 MED23Q9ULK4 1368 aa21.64■■□□□ 1.05
CLDND1-204ENST00000394185 USPL1Q5W0Q7 1092 aa21.64■■□□□ 1.05
CLDND1-204ENST00000394185 NOL8Q76FK4 1167 aaKnown RBP21.64■■□□□ 1.05
CLDND1-204ENST00000394185 PAG1Q9NWQ8 432 aa21.64■■□□□ 1.05
CLDND1-204ENST00000394185 IFIT1P09914 478 aaKnown RBP21.63■■□□□ 1.05
CLDND1-204ENST00000394185 SCARF1Q14162 830 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 TBC1D9BQ66K14 1250 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 PRPF40BQ6NWY9 871 aaKnown RBP21.63■■□□□ 1.05
CLDND1-204ENST00000394185 CLEC4GQ6UXB4 293 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 HELBQ8NG08 1087 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1003.5 ms