RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 TGFB2P61812 414 aa24.21■■□□□ 1.47
PSEN1-203ENST00000394157 FOXO4P98177 505 aa24.21■■□□□ 1.47
PSEN1-203ENST00000394157 CCDC152Q4G0S7 254 aa24.21■■□□□ 1.47
PSEN1-203ENST00000394157 CCDC24Q8N4L8 307 aa24.21■■□□□ 1.47
PSEN1-203ENST00000394157 RTL9Q8NET4 1388 aa24.2■■□□□ 1.46
PSEN1-203ENST00000394157 TTLL11Q8NHH1 800 aa24.2■■□□□ 1.46
PSEN1-203ENST00000394157 TNRC6CQ9HCJ0 1690 aaKnown RBP24.19■■□□□ 1.46
PSEN1-203ENST00000394157 MTX1Q13505 466 aa24.19■■□□□ 1.46
PSEN1-203ENST00000394157 BICC1Q9H694 974 aaKnown RBP24.19■■□□□ 1.46
PSEN1-203ENST00000394157 PPP1R1BQ9UD71 204 aaPredicted RBP24.19■■□□□ 1.46
PSEN1-203ENST00000394157 H0YIN7 160 aa24.18■■□□□ 1.46
PSEN1-203ENST00000394157 EPHA10Q5JZY3 1008 aa24.18■■□□□ 1.46
PSEN1-203ENST00000394157 LMBR1LQ6UX01 489 aa24.18■■□□□ 1.46
PSEN1-203ENST00000394157 ANKRD44Q8N8A2 993 aa24.18■■□□□ 1.46
PSEN1-203ENST00000394157 HOXA10P31260 410 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-203ENST00000394157 RPAP2Q8IXW5 612 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-203ENST00000394157 EXOC6Q8TAG9 804 aa24.17■■□□□ 1.46
PSEN1-203ENST00000394157 RPGRQ92834 1020 aaKnown RBP24.17■■□□□ 1.46
PSEN1-203ENST00000394157 SRGNP10124 158 aa24.16■■□□□ 1.46
PSEN1-203ENST00000394157 NPR1P16066 1061 aa24.16■■□□□ 1.46
PSEN1-203ENST00000394157 IRX6P78412 446 aaPredicted RBP24.16■■□□□ 1.46
PSEN1-203ENST00000394157 C3orf67Q6ZVT6 689 aa24.16■■□□□ 1.46
PSEN1-203ENST00000394157 C2CD5Q86YS7 1000 aa24.16■■□□□ 1.46
PSEN1-203ENST00000394157 MASTLQ96GX5 879 aa24.16■■□□□ 1.46
PSEN1-203ENST00000394157 RBM17Q96I25 401 aaKnown RBP24.16■■□□□ 1.46
PSEN1-203ENST00000394157 STYK1Q6J9G0 422 aa24.15■■□□□ 1.46
PSEN1-203ENST00000394157 DDX46Q7L014 1031 aaKnown RBP24.15■■□□□ 1.46
PSEN1-203ENST00000394157 CRAMP1Q96RY5 1269 aa24.14■■□□□ 1.45
PSEN1-203ENST00000394157 ALDH1B1P30837 517 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 ATP8B2P98198 1209 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 IFIT5Q13325 482 aaKnown RBP24.13■■□□□ 1.45
PSEN1-203ENST00000394157 CCDC57Q2TAC2 916 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 ERICH6BQ5W0A0 696 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 CDC5LQ99459 802 aaKnown RBP24.13■■□□□ 1.45
PSEN1-203ENST00000394157 GREM2Q9H772 168 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 C1orf115Q9H7X2 142 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 CHMP3Q9Y3E7 222 aa24.13■■□□□ 1.45
PSEN1-203ENST00000394157 DLEC1Q9Y238 1755 aa24.12■■□□□ 1.45
PSEN1-203ENST00000394157 ANKRD18BA2A2Z9 1011 aa24.12■■□□□ 1.45
PSEN1-203ENST00000394157 FAM161AQ3B820 660 aa24.12■■□□□ 1.45
PSEN1-203ENST00000394157 CEP85Q6P2H3 762 aa24.12■■□□□ 1.45
PSEN1-203ENST00000394157 CNKSR1Q969H4 720 aa24.12■■□□□ 1.45
PSEN1-203ENST00000394157 COL11A2P13942 1736 aaPredicted RBP24.12■■□□□ 1.45
PSEN1-203ENST00000394157 SRGAP3O43295 1099 aa24.11■■□□□ 1.45
PSEN1-203ENST00000394157 HMMRO75330 724 aa24.11■■□□□ 1.45
PSEN1-203ENST00000394157 ITGA6P23229 1130 aa24.11■■□□□ 1.45
PSEN1-203ENST00000394157 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
PSEN1-203ENST00000394157 FHDC1Q9C0D6 1143 aaPredicted RBP24.11■■□□□ 1.45
PSEN1-203ENST00000394157 KIAA1551Q9HCM1 1747 aa24.1■■□□□ 1.45
PSEN1-203ENST00000394157 DPEP1P16444 411 aa24.1■■□□□ 1.45
PSEN1-203ENST00000394157 GRAPQ13588 217 aa24.1■■□□□ 1.45
PSEN1-203ENST00000394157 TMC4Q7Z404 712 aa24.1■■□□□ 1.45
PSEN1-203ENST00000394157 GRAPLQ8TC17 118 aaPredicted RBP24.1■■□□□ 1.45
PSEN1-203ENST00000394157 SSH3Q8TE77 659 aa24.1■■□□□ 1.45
PSEN1-203ENST00000394157 BBOX1O75936 387 aa24.09■■□□□ 1.45
PSEN1-203ENST00000394157 CHRNA5P30532 468 aa24.09■■□□□ 1.45
PSEN1-203ENST00000394157 POLA2Q14181 598 aa24.09■■□□□ 1.45
PSEN1-203ENST00000394157 CCDC85AQ96PX6 553 aaPredicted RBP24.09■■□□□ 1.45
PSEN1-203ENST00000394157 A0A0G2JLW4 131 aa24.08■■□□□ 1.45
PSEN1-203ENST00000394157 ZNF622Q969S3 477 aaKnown RBP eCLIP24.08■■□□□ 1.45
PSEN1-203ENST00000394157 SYT17Q9BSW7 474 aa24.08■■□□□ 1.45
PSEN1-203ENST00000394157 PIM2Q9P1W9 311 aa24.08■■□□□ 1.45
PSEN1-203ENST00000394157 FBXO3Q9UK99 471 aa24.08■■□□□ 1.45
PSEN1-203ENST00000394157 KCNA3P22001 575 aa24.07■■□□□ 1.44
PSEN1-203ENST00000394157 IGHMBP2P38935 993 aaKnown RBP24.07■■□□□ 1.44
PSEN1-203ENST00000394157 RFX5P48382 616 aaPredicted RBP24.07■■□□□ 1.44
PSEN1-203ENST00000394157 RPS8P62241 208 aaKnown RBP24.07■■□□□ 1.44
PSEN1-203ENST00000394157 TAF7LQ5H9L4 462 aa24.07■■□□□ 1.44
PSEN1-203ENST00000394157 ANKRD18AQ8IVF6 992 aa24.07■■□□□ 1.44
PSEN1-203ENST00000394157 SEC31BQ9NQW1 1179 aa24.07■■□□□ 1.44
PSEN1-203ENST00000394157 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
PSEN1-203ENST00000394157 TTLL6Q8N841 843 aa24.06■■□□□ 1.44
PSEN1-203ENST00000394157 COPRSQ9NQ92 184 aa24.06■■□□□ 1.44
PSEN1-203ENST00000394157 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
PSEN1-203ENST00000394157 PTPN12Q05209 780 aaKnown RBP24.04■■□□□ 1.44
PSEN1-203ENST00000394157 SIRT2Q8IXJ6 389 aa24.04■■□□□ 1.44
PSEN1-203ENST00000394157 CELF1Q92879 486 aaKnown RBP24.04■■□□□ 1.44
PSEN1-203ENST00000394157 MPHOSPH8Q99549 860 aa24.04■■□□□ 1.44
PSEN1-203ENST00000394157 BSDC1Q9NW68 430 aaPredicted RBP24.04■■□□□ 1.44
PSEN1-203ENST00000394157 NLGN2Q8NFZ4 835 aa24.03■■□□□ 1.44
PSEN1-203ENST00000394157 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
PSEN1-203ENST00000394157 HDAC1Q13547 482 aaPredicted RBP24.02■■□□□ 1.44
PSEN1-203ENST00000394157 DALRD3Q5D0E6 543 aaKnown RBP24.02■■□□□ 1.44
PSEN1-203ENST00000394157 PRPF40BQ6NWY9 871 aaKnown RBP24.02■■□□□ 1.44
PSEN1-203ENST00000394157 LDHAL6AQ6ZMR3 332 aa24.02■■□□□ 1.44
PSEN1-203ENST00000394157 PPEF1O14829 653 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-203ENST00000394157 CIAO1O76071 339 aa24.01■■□□□ 1.43
PSEN1-203ENST00000394157 GRIPAP1Q4V328 841 aa24.01■■□□□ 1.43
PSEN1-203ENST00000394157 HSP90AB4PQ58FF6 505 aa24.01■■□□□ 1.43
PSEN1-203ENST00000394157 CC2D2BQ6DHV5 1058 aa24.01■■□□□ 1.43
PSEN1-203ENST00000394157 TMX4Q9H1E5 349 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-203ENST00000394157 RWDD1Q9H446 243 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-203ENST00000394157 NOP58Q9Y2X3 529 aaKnown RBP24.01■■□□□ 1.43
PSEN1-203ENST00000394157 EYA2O00167 538 aa24■■□□□ 1.43
PSEN1-203ENST00000394157 SOGA3Q5TF21 947 aa24■■□□□ 1.43
PSEN1-203ENST00000394157 SP8Q8IXZ3 490 aa24■■□□□ 1.43
PSEN1-203ENST00000394157 ZNF594Q96JF6 807 aaPredicted RBP24■■□□□ 1.43
PSEN1-203ENST00000394157 ATP6V0A2Q9Y487 856 aa24■■□□□ 1.43
PSEN1-203ENST00000394157 CNNM1Q9NRU3 951 aa23.99■■□□□ 1.43
PSEN1-203ENST00000394157 TAF1P21675 1872 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms