RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 TRIM6-TRIM34B2RNG4 842 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 H3BQV1 296 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 GOLIM4O00461 696 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 RGL2O15211 777 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 POLR3GO15318 223 aaPredicted RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 PPP6R2O75170 966 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 RPS6KA5O75582 802 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 SLC4A2P04920 1241 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 IFIT2P09913 472 aaKnown RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 NBPF7P0C2Y1 421 aaPredicted RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 HCLS1P14317 486 aaPredicted RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 EVCP57679 992 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 PIP4K2BP78356 416 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 XPCQ01831 940 aaPredicted RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 APBA1Q02410 837 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ITIH3Q06033 890 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TYRO3Q06418 890 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 BRD3Q15059 726 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TAF7Q15545 349 aaPredicted RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 HSP90B2PQ58FF3 399 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 IFFO2Q5TF58 517 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 HDGFL1Q5TGJ6 251 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 LARP1BQ659C4 914 aaKnown RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 CEP135Q66GS9 1140 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ADALQ6DHV7 355 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 SMYD5Q6GMV2 418 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 CCDC70Q6NSX1 233 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ZSCAN25Q6NSZ9 544 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TMCO3Q6UWJ1 677 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 GBP6Q6ZN66 633 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ZNF662Q6ZS27 426 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 NYAP1Q6ZVC0 841 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 NBPF11Q86T75 865 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TAX1BP1Q86VP1 789 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 NUTM1Q86Y26 1132 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 FMNL3Q8IVF7 1028 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TEX2Q8IWB9 1127 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 CCDC155Q8N6L0 562 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 GPR161Q8N6U8 529 aaKnown RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 CEP112Q8N8E3 955 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 IQUBQ8NA54 791 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 MNS1Q8NEH6 495 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ANKRD20A12PQ8NF67 263 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 RHPN1Q8TCX5 695 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 BICD2Q8TD16 824 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 UBXN4Q92575 508 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 MAP4K1Q92918 833 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 GTF3C6Q969F1 213 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 SMARCE1Q969G3 411 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 EXOC4Q96A65 974 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 NUDT16Q96DE0 195 aaKnown RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ZNF274Q96GC6 653 aaPredicted RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 SPATA32Q96LK8 384 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 AGXT2Q9BYV1 514 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TRIM5Q9C035 493 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 VIPAS39Q9H9C1 493 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 BCL2L12Q9HB09 334 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 HELLSQ9NRZ9 838 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 PDRG1Q9NUG6 133 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 CLIP2Q9UDT6 1046 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 CEP131Q9UPN4 1083 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TBC1D2BQ9UPU7 963 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 MTMR6Q9Y217 621 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 TBX22Q9Y458 520 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 MAP2P11137 1827 aaKnown RBP2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 STK36Q9NRP7 1315 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 NID2Q14112 1375 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 HEG1Q9ULI3 1381 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 ATRNO75882 1429 aa2.32□□□□□ -2.04
TRAJ49-201ENST00000390488 DLG5Q8TDM6 1919 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 FAM237AA0A1B0GTK4 181 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 NUTM2FA1L443 756 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 TMCO5BA8MYB1 307 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 SRGAP3O43295 1099 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 FIBPO43427 364 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 ZEB2O60315 1214 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 STX10O60499 249 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 CIAO1O76071 339 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 IPO7O95373 1038 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 CD2BP2O95400 341 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 TNNT1P13805 278 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 H2AFXP16104 143 aaPredicted RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 XBP1P17861 261 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 CASTP20810 708 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 RPS6KB1P23443 525 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 HMGB2P26583 209 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 ERCC5P28715 1186 aaPredicted RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 GJB2P29033 226 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 PDE6BP35913 854 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 KCNJ4P48050 445 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 ZNF75DP51815 510 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 CDR1P51861 262 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 AK2P54819 239 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 SH3BGRP55822 239 aaPredicted RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 ETF1P62495 437 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 CKAP4Q07065 602 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 ORC2Q13416 577 aaPredicted RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 EIF4A2Q14240 407 aaKnown RBP2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 SLMAPQ14BN4 828 aa2.31□□□□□ -2.04
TRAJ49-201ENST00000390488 NECTIN1Q15223 517 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms