RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 NCOA7Q8NI08 942 aa9.94□□□□□ -0.82
PKP4-202ENST00000389759 CCDC113Q9H0I3 377 aa9.94□□□□□ -0.82
PKP4-202ENST00000389759 SEPT11Q9NVA2 429 aaKnown RBP9.94□□□□□ -0.82
PKP4-202ENST00000389759 VPS18Q9P253 973 aa9.94□□□□□ -0.82
PKP4-202ENST00000389759 BCCIPQ9P287 314 aaKnown RBP eCLIP9.94□□□□□ -0.82
PKP4-202ENST00000389759 PHACTR2O75167 634 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 GADD45BO75293 160 aaPredicted RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 ANXA1P04083 346 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 MTIF2P46199 727 aaKnown RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 EVCP57679 992 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 CREB3L3Q68CJ9 461 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 MPRIPQ6WCQ1 1025 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 DDX46Q7L014 1031 aaKnown RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 POLKQ9UBT6 870 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 TTC41PQ6P2S7 1318 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 CTAGE9A4FU28 777 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 MINDY4BA8MYZ0 360 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 MATR3P43243 847 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■□ 23.3
PKP4-202ENST00000389759 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 CTAGE1Q96RT6 745 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 ABCF2Q9UG63 623 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 EBAG9O00559 213 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 PIP4K2BP78356 416 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 SPAG1Q07617 926 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 ELF2Q15723 593 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 PUS7Q96PZ0 661 aaKnown RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 SOS1Q07889 1333 aaPredicted RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 FGFR1OPO95684 399 aaKnown RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 CPA1P15085 419 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 MARCKSP29966 332 aaPredicted RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 ZNF75DP51815 510 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 IRX3P78415 501 aaPredicted RBP9.93□□□□□ -0.82
PKP4-202ENST00000389759 KRT24Q2M2I5 525 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 MICALL1Q8N3F8 863 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 PHACTR3Q96KR7 559 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■■□□□ 14.1
PKP4-202ENST00000389759 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
PKP4-202ENST00000389759 TTC31Q49AM3 519 aaPredicted RBP9.92□□□□□ -0.82
PKP4-202ENST00000389759 TMEM67Q5HYA8 995 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 MAATS1Q7Z4T9 603 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 KCNH5Q8NCM2 988 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 UTP14AQ9BVJ6 771 aaKnown RBP9.92□□□□□ -0.82
PKP4-202ENST00000389759 CBX8Q9HC52 389 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 HSF2BPO75031 334 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 NMIQ13287 307 aaPredicted RBP9.92□□□□□ -0.82
PKP4-202ENST00000389759 CCDC178Q5BJE1 867 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 VPS36Q86VN1 386 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 IQCA1Q86XH1 822 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 CCDC144CPQ8IYA2 1237 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 AKR1B10O60218 316 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 MAP3K12Q12852 859 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 ALG1Q9BT22 464 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 SLC26A6Q9BXS9 759 aa9.92□□□□□ -0.82
PKP4-202ENST00000389759 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
PKP4-202ENST00000389759 CYLC1P35663 651 aaPredicted RBP9.91□□□□□ -0.82
PKP4-202ENST00000389759 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
PKP4-202ENST00000389759 MCMDC2Q4G0Z9 681 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 FAM173BQ6P4H8 233 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 UBE3BQ7Z3V4 1068 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 NBPF11Q86T75 865 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 PYM1Q9BRP8 204 aaKnown RBP9.91□□□□□ -0.82
PKP4-202ENST00000389759 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
PKP4-202ENST00000389759 FAM160A1Q05DH4 1040 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 PPP2R3AQ06190 1150 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 KRBA2Q6ZNG9 492 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 TICAM2Q86XR7 235 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 TSG101Q99816 390 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 CLSTN2Q9H4D0 955 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 LZTFL1Q9NQ48 299 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 PUF60Q9UHX1 559 aaKnown RBP9.91□□□□□ -0.82
PKP4-202ENST00000389759 PZPP20742 1482 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 ANKRD62A6NC57 917 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 IFIT5Q13325 482 aaKnown RBP9.91□□□□□ -0.82
PKP4-202ENST00000389759 ATL3Q6DD88 541 aa9.91□□□□□ -0.82
PKP4-202ENST00000389759 CCDC194A0A1B0GVG4 234 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 PTPDC1A2A3K4 754 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 UBA7P41226 1012 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 SMC1AQ14683 1233 aaKnown RBP9.9□□□□□ -0.82
PKP4-202ENST00000389759 THEMISQ8N1K5 641 aaPredicted RBP9.9□□□□□ -0.82
PKP4-202ENST00000389759 ANKRD24Q8TF21 1146 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 OPA1O60313 960 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 ALDH1L1O75891 902 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 NLRP5P59047 1200 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 MYL5Q02045 173 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 PKP1Q13835 747 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 HDXQ7Z353 690 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 ATRIPQ8WXE1 791 aa9.9□□□□□ -0.82
PKP4-202ENST00000389759 ZNF608Q9ULD9 1512 aaPredicted RBP9.9□□□□□ -0.82
PKP4-202ENST00000389759 RANBP6O60518 1105 aaKnown RBP9.9□□□□□ -0.83
PKP4-202ENST00000389759 RHOXF2BP0C7M4 288 aa9.9□□□□□ -0.83
PKP4-202ENST00000389759 HSPA4P34932 840 aa9.9□□□□□ -0.83
PKP4-202ENST00000389759 ANKRD18AQ8IVF6 992 aa9.9□□□□□ -0.83
PKP4-202ENST00000389759 RHOXF2Q9BQY4 288 aa9.9□□□□□ -0.83
PKP4-202ENST00000389759 CHPF2Q9P2E5 772 aa9.9□□□□□ -0.83
PKP4-202ENST00000389759 ZBTB43O43298 467 aa9.89□□□□□ -0.83
PKP4-202ENST00000389759 AFMP43652 599 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms