RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PTK7Q13308 1070 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PRR16Q569H4 304 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 IGFL4Q6B9Z1 124 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PRIMA1Q86XR5 153 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 LDLRAD3Q86YD5 345 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FOXP4Q8IVH2 680 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SLF2Q8IX21 1173 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NETO1Q8TDF5 533 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 MAML3Q96JK9 1138 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 MTMR4Q9NYA4 1195 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TESMINQ9Y4I5 508 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TLL2Q9Y6L7 1015 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PCLOQ9Y6V0 5065 aa-0.75□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SYNE1Q8NF91 8797 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CBLP22681 906 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CTSOP43234 321 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PRB3Q04118 309 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NFE2Q16621 373 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NBPF9Q3BBW0 867 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 GPRIN1Q7Z2K8 1008 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CADPS2Q86UW7 1296 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PLCD3Q8N3E9 789 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 RNF217Q8TC41 542 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SAMD11Q96NU1 681 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ZIC5Q96T25 663 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CHRDL1Q9BU40 450 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 C7orf69Q9H7B7 122 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 LUC7LQ9NQ29 371 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 STRN4Q9NRL3 753 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 DLL3Q9NYJ7 618 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 DMRT1Q9Y5R6 373 aa-0.76□□□□□ -2.53
RNU6-1340P-201ENST00000384438 COL2A1P02458 1487 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 IGKV6D-41A0A0C4DH26 115 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PLEKHG3A1L390 1219 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SLC22A31A6NKX4 558 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NPIPB8E9PQR5 432 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CILPO75339 1184 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PRB4P10163 310 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 BMP4P12644 408 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 HDGFP51858 240 aaKnown RBP-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NFATC3Q12968 1075 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 RTN1Q16799 776 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ZNF517Q6ZMY9 492 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SPRED2Q7Z698 418 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TRIM42Q8IWZ5 723 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SP8Q8IXZ3 490 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 EFCAB3Q8N7B9 438 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 OXER1Q8TDS5 423 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 KCNN1Q92952 543 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 THAP11Q96EK4 314 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FAM212AQ96EL1 285 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 MDFIQ99750 246 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 HERPUD2Q9BSE4 406 aa-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 DMBT1Q9UGM3 2413 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PRRC2AP48634 2157 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 HMX2A2RU54 273 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ESPNB1AK53 854 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 SMAD6O43541 496 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NR3C2P08235 984 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 KIR3DL1P43629 444 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 CTBSQ01459 385 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 KIR3DS1Q14943 382 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 TRAPPC3LQ5T215 181 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ZNF574Q6ZN55 896 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 Q6ZS46 218 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 GAREM2Q75VX8 874 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 C1QL2Q7Z5L3 287 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 FMR1NBQ8N0W7 255 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 WIPF2Q8TF74 440 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 BCL7CQ8WUZ0 217 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 BRINP2Q9C0B6 783 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 NSUN3Q9H649 340 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PRDM9Q9NQV7 894 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ZIM2Q9NZV7 527 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 PCDHGA10Q9Y5H3 936 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 ITGB4P16144 1822 aa-0.78□□□□□ -2.53
RNU6-1340P-201ENST00000384438 WDR64B1ANS9 1081 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 M0R082 166 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 SPTLC1O15269 473 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 BMP5P22003 454 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 RELBQ01201 579 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ABHD18Q0P651 414 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 PDAP1Q13442 181 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ZNF385BQ569K4 471 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 SWT1Q5T5J6 900 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 PRPF38BQ5VTL8 546 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 FYB2Q5VWT5 728 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 RIPOR1Q6ZS17 1223 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 C8orf86Q6ZUL3 223 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ARMC10Q8N2F6 343 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ZNF417Q8TAU3 575 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 SMG7Q92540 1137 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 DACT3Q96B18 629 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 DIRC2Q96SL1 478 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 ZNF587Q96SQ5 575 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 TMEM79Q9BSE2 394 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 WWOXQ9NZC7 414 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 RNF7Q9UBF6 113 aa-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 RALYQ9UKM9 306 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1340P-201ENST00000384438 LEMD3Q9Y2U8 911 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms