RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 NPHP3Q7Z494 1330 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 ANKRD44Q8N8A2 993 aa19.52■□□□□ 0.71
COL4A3BP-203ENST00000380494 MAPKBP1O60336 1514 aa19.52■□□□□ 0.71
COL4A3BP-203ENST00000380494 PLVAPQ9BX97 442 aa19.51■□□□□ 0.71
COL4A3BP-203ENST00000380494 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
COL4A3BP-203ENST00000380494 MBIPQ9NS73 344 aa19.51■□□□□ 0.71
COL4A3BP-203ENST00000380494 ATP2C2O75185 946 aa19.51■□□□□ 0.71
COL4A3BP-203ENST00000380494 MYD88Q99836 296 aa19.51■□□□□ 0.71
COL4A3BP-203ENST00000380494 DBF4Q9UBU7 674 aaPredicted RBP19.51■□□□□ 0.71
COL4A3BP-203ENST00000380494 USP5P45974 858 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 RRAGBQ5VZM2 374 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 NEBLO76041 1014 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 CEP57Q86XR8 500 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 EXOC1Q9NV70 894 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 CCDC114Q96M63 670 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
COL4A3BP-203ENST00000380494 PRPF4BQ13523 1007 aaKnown RBP19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 TMEM67Q5HYA8 995 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 CDK13Q14004 1512 aaKnown RBP19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 A0A1B0GUA9 196 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 KIF5BP33176 963 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 STXBP4Q6ZWJ1 553 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 PLCD3Q8N3E9 789 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 PAF1Q8N7H5 531 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 CCDC61Q9Y6R9 512 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 TSGA10Q9BZW7 698 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 CCDC50Q8IVM0 306 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 LMBR1Q8WVP7 490 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 A0A1W2PRG0 241 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 NECAB1Q8N987 351 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 AFAP1L1Q8TED9 768 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 CCDC77Q9BR77 488 aa19.49■□□□□ 0.71
COL4A3BP-203ENST00000380494 MINDY4BA8MYZ0 360 aa19.48■□□□□ 0.71
COL4A3BP-203ENST00000380494 KCNH5Q8NCM2 988 aa19.48■□□□□ 0.71
COL4A3BP-203ENST00000380494 RHPN1Q8TCX5 695 aa19.48■□□□□ 0.71
COL4A3BP-203ENST00000380494 RIOK3O14730 519 aaKnown RBP19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 PPP2R3AQ06190 1150 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 PPP1R42Q7Z4L9 355 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 UBA7P41226 1012 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 KIF5AQ12840 1032 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 SLC5A1P13866 664 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 EVCP57679 992 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 GTF3C6Q969F1 213 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 UBA5Q9GZZ9 404 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 VAV2P52735 878 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 BRF1Q92994 677 aa19.47■□□□□ 0.71
COL4A3BP-203ENST00000380494 RBM8AQ9Y5S9 174 aaKnown RBP19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 CAVIN4Q5BKX8 364 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 DAAM2Q86T65 1068 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 MKNK2Q9HBH9 465 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 CTNNA2P26232 953 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 HOMER2Q9NSB8 354 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 MYO1BO43795 1136 aa19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
COL4A3BP-203ENST00000380494 CUL7Q14999 1698 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 SPTLC2O15270 562 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 ZNF569Q5MCW4 686 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 MRPL50Q8N5N7 158 aaKnown RBP19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 SCLT1Q96NL6 688 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 SAMD15Q9P1V8 674 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 KIF14Q15058 1648 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 CNGA4Q8IV77 575 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 IKBKGQ9Y6K9 419 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 RANBP6O60518 1105 aaKnown RBP19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 STRN4Q9NRL3 753 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 IFNKQ9P0W0 207 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 IFIT5Q13325 482 aaKnown RBP19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 TBC1D5Q92609 795 aa19.45■□□□□ 0.7
COL4A3BP-203ENST00000380494 CPSF2Q9P2I0 782 aaKnown RBP19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 IMPACTQ9P2X3 320 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 TTC41PQ6P2S7 1318 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 PSMA7O14818 248 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 CPLX4Q7Z7G2 160 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 NUP160Q12769 1436 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 ALG1Q9BT22 464 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 USP26Q9BXU7 913 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 EHMT1Q9H9B1 1298 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 STARD3NLO95772 234 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 BRAPQ7Z569 592 aa19.44■□□□□ 0.7
COL4A3BP-203ENST00000380494 KLF18A0A0U1RQI7 1052 aa19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 ABCF2Q9UG63 623 aa19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 CEP83Q9Y592 693 aa19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 TMTC2Q8N394 836 aa19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 PUF60Q9UHX1 559 aaKnown RBP19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 LACTBP83111 547 aaPredicted RBP19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 SREK1Q8WXA9 508 aaKnown RBP19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 U2AF2P26368 475 aaKnown RBP eCLIP19.43■□□□□ 0.72e-8■■■■■ 27.8
COL4A3BP-203ENST00000380494 MFSD6Q6ZSS7 791 aa19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 BAG1Q99933 345 aaPredicted RBP19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
COL4A3BP-203ENST00000380494 Q6ZUG5 572 aa19.42■□□□□ 0.7
COL4A3BP-203ENST00000380494 KRT23Q9C075 422 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms