RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 METTL22Q9BUU2 404 aaPredicted RBP31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 CWC25Q9NXE8 425 aaPredicted RBP31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 MAP3K2Q9Y2U5 619 aa31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 PPIP5K2O43314 1243 aa31.65■■■□□ 2.66
TNFRSF4-201ENST00000379236 SLC51AQ86UW1 340 aa31.65■■■□□ 2.66
TNFRSF4-201ENST00000379236 MPNDQ8N594 471 aa31.65■■■□□ 2.66
TNFRSF4-201ENST00000379236 L3MBTL3Q96JM7 780 aaPredicted RBP31.65■■■□□ 2.66
TNFRSF4-201ENST00000379236 LRRC37AA6NMS7 1700 aa31.64■■■□□ 2.66
TNFRSF4-201ENST00000379236 NEXNQ0ZGT2 675 aa31.64■■■□□ 2.66
TNFRSF4-201ENST00000379236 SF3B3Q15393 1217 aaKnown RBP31.64■■■□□ 2.66
TNFRSF4-201ENST00000379236 KSR2Q6VAB6 950 aa31.63■■■□□ 2.65
TNFRSF4-201ENST00000379236 GPC2Q8N158 579 aa31.63■■■□□ 2.65
TNFRSF4-201ENST00000379236 MYH3P11055 1940 aa31.63■■■□□ 2.65
TNFRSF4-201ENST00000379236 SLC4A2P04920 1241 aa31.62■■■□□ 2.65
TNFRSF4-201ENST00000379236 VPS33BQ9H267 617 aa31.62■■■□□ 2.65
TNFRSF4-201ENST00000379236 HACL1Q9UJ83 578 aa31.62■■■□□ 2.65
TNFRSF4-201ENST00000379236 GJA3Q9Y6H8 435 aa31.62■■■□□ 2.65
TNFRSF4-201ENST00000379236 COL4A5P29400 1685 aa31.61■■■□□ 2.65
TNFRSF4-201ENST00000379236 PI4KAP2A4QPH2 592 aa31.61■■■□□ 2.65
TNFRSF4-201ENST00000379236 AOC3Q16853 763 aa31.61■■■□□ 2.65
TNFRSF4-201ENST00000379236 PI4KAP1Q8N8J0 262 aa31.61■■■□□ 2.65
TNFRSF4-201ENST00000379236 PCCAP05165 728 aaPredicted RBP31.6■■■□□ 2.65
TNFRSF4-201ENST00000379236 CHADLQ6NUI6 762 aa31.6■■■□□ 2.65
TNFRSF4-201ENST00000379236 MYH16Q9H6N6 1097 aa31.6■■■□□ 2.65
TNFRSF4-201ENST00000379236 TAF1DQ9H5J8 278 aaPredicted RBP31.59■■■□□ 2.65
TNFRSF4-201ENST00000379236 LMOD1P29536 600 aaPredicted RBP31.58■■■□□ 2.65
TNFRSF4-201ENST00000379236 EAPPQ56P03 285 aaPredicted RBP31.58■■■□□ 2.65
TNFRSF4-201ENST00000379236 RTFDC1Q9BY42 306 aaPredicted RBP31.58■■■□□ 2.65
TNFRSF4-201ENST00000379236 EXOSC9Q06265 439 aaKnown RBP31.57■■■□□ 2.64
TNFRSF4-201ENST00000379236 CELF1Q92879 486 aaKnown RBP31.57■■■□□ 2.64
TNFRSF4-201ENST00000379236 PDE8AO60658 829 aa31.56■■■□□ 2.64
TNFRSF4-201ENST00000379236 CCDC152Q4G0S7 254 aa31.56■■■□□ 2.64
TNFRSF4-201ENST00000379236 LDHDQ86WU2 507 aa31.56■■■□□ 2.64
TNFRSF4-201ENST00000379236 EPHX2P34913 555 aa31.55■■■□□ 2.64
TNFRSF4-201ENST00000379236 HTRA3P83110 453 aa31.55■■■□□ 2.64
TNFRSF4-201ENST00000379236 FKBP5Q13451 457 aaPredicted RBP31.55■■■□□ 2.64
TNFRSF4-201ENST00000379236 G2E3Q7L622 706 aa31.55■■■□□ 2.64
TNFRSF4-201ENST00000379236 CLEC11AQ9Y240 323 aa31.55■■■□□ 2.64
TNFRSF4-201ENST00000379236 POTEIP0CG38 1075 aa31.54■■■□□ 2.64
TNFRSF4-201ENST00000379236 POTEJP0CG39 1038 aa31.54■■■□□ 2.64
TNFRSF4-201ENST00000379236 FLIIQ13045 1269 aa31.54■■■□□ 2.64
TNFRSF4-201ENST00000379236 JARID2Q92833 1246 aaPredicted RBP31.54■■■□□ 2.64
TNFRSF4-201ENST00000379236 NSFL1CQ9UNZ2 370 aaKnown RBP31.54■■■□□ 2.64
TNFRSF4-201ENST00000379236 PNMA8AQ86V59 439 aaPredicted RBP31.53■■■□□ 2.64
TNFRSF4-201ENST00000379236 ZNRF3Q9ULT6 936 aa31.53■■■□□ 2.64
TNFRSF4-201ENST00000379236 CDHR2Q9BYE9 1310 aa31.52■■■□□ 2.64
TNFRSF4-201ENST00000379236 SPEF2Q9C093 1822 aa31.52■■■□□ 2.64
TNFRSF4-201ENST00000379236 VAMP4O75379 141 aa31.52■■■□□ 2.64
TNFRSF4-201ENST00000379236 RPS8P62241 208 aaKnown RBP31.52■■■□□ 2.64
TNFRSF4-201ENST00000379236 KIAA2012Q0VF49 1180 aa31.52■■■□□ 2.64
TNFRSF4-201ENST00000379236 DUOX1Q9NRD9 1551 aa31.51■■■□□ 2.64
TNFRSF4-201ENST00000379236 IGKV5-2P06315 115 aa31.51■■■□□ 2.63
TNFRSF4-201ENST00000379236 CWF19L2Q2TBE0 894 aaKnown RBP31.5■■■□□ 2.63
TNFRSF4-201ENST00000379236 CCDC85AQ96PX6 553 aaPredicted RBP31.5■■■□□ 2.63
TNFRSF4-201ENST00000379236 COL4A1P02462 1669 aa31.5■■■□□ 2.63
TNFRSF4-201ENST00000379236 NEURL1BA8MQ27 555 aa31.49■■■□□ 2.63
TNFRSF4-201ENST00000379236 C6orf229H3BNL8 230 aa31.49■■■□□ 2.63
TNFRSF4-201ENST00000379236 DNAJC5GQ8N7S2 189 aa31.49■■■□□ 2.63
TNFRSF4-201ENST00000379236 SPINK5Q9NQ38 1064 aaPredicted RBP31.49■■■□□ 2.63
TNFRSF4-201ENST00000379236 SEC31BQ9NQW1 1179 aa31.49■■■□□ 2.63
TNFRSF4-201ENST00000379236 ADAMTSL1Q8N6G6 1762 aa31.48■■■□□ 2.63
TNFRSF4-201ENST00000379236 WASHC4Q2M389 1173 aa31.48■■■□□ 2.63
TNFRSF4-201ENST00000379236 KLRG1Q96E93 195 aa31.48■■■□□ 2.63
TNFRSF4-201ENST00000379236 EYA3Q99504 573 aa31.48■■■□□ 2.63
TNFRSF4-201ENST00000379236 LTBP1Q14766 1721 aa31.47■■■□□ 2.63
TNFRSF4-201ENST00000379236 DNAAF4Q8WXU2 420 aa31.47■■■□□ 2.63
TNFRSF4-201ENST00000379236 CTSWP56202 376 aa31.46■■■□□ 2.63
TNFRSF4-201ENST00000379236 GPSM2P81274 684 aa31.46■■■□□ 2.63
TNFRSF4-201ENST00000379236 CIAPIN1Q6FI81 312 aa31.46■■■□□ 2.63
TNFRSF4-201ENST00000379236 ANKRD18AQ8IVF6 992 aa31.46■■■□□ 2.63
TNFRSF4-201ENST00000379236 CXCL9Q07325 125 aa31.45■■■□□ 2.63
TNFRSF4-201ENST00000379236 TNIP1Q15025 636 aa31.45■■■□□ 2.63
TNFRSF4-201ENST00000379236 ANKIB1Q9P2G1 1089 aa31.45■■■□□ 2.63
TNFRSF4-201ENST00000379236 SCNN1DP51172 638 aa31.44■■■□□ 2.62
TNFRSF4-201ENST00000379236 UBE3BQ7Z3V4 1068 aa31.44■■■□□ 2.62
TNFRSF4-201ENST00000379236 CDC5LQ99459 802 aaKnown RBP31.44■■■□□ 2.62
TNFRSF4-201ENST00000379236 RIMBP2O15034 1052 aa31.43■■■□□ 2.62
TNFRSF4-201ENST00000379236 BCL2L13Q9BXK5 485 aa31.43■■■□□ 2.62
TNFRSF4-201ENST00000379236 RAD17O75943 681 aa31.42■■■□□ 2.62
TNFRSF4-201ENST00000379236 G3V3G9 751 aa31.41■■■□□ 2.62
TNFRSF4-201ENST00000379236 EPS15P42566 896 aa31.41■■■□□ 2.62
TNFRSF4-201ENST00000379236 GCKRQ14397 625 aa31.41■■■□□ 2.62
TNFRSF4-201ENST00000379236 DCAF8Q5TAQ9 597 aa31.41■■■□□ 2.62
TNFRSF4-201ENST00000379236 LINS1Q8NG48 757 aa31.41■■■□□ 2.62
TNFRSF4-201ENST00000379236 POLLQ9UGP5 575 aa31.41■■■□□ 2.62
TNFRSF4-201ENST00000379236 TBC1D16Q8TBP0 767 aa31.4■■■□□ 2.62
TNFRSF4-201ENST00000379236 ZC3H12CQ9C0D7 883 aaKnown RBP31.4■■■□□ 2.62
TNFRSF4-201ENST00000379236 GGA1Q9UJY5 639 aa31.4■■■□□ 2.62
TNFRSF4-201ENST00000379236 H7C1W4 665 aa31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 UFL1O94874 794 aa31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 USP50Q70EL3 339 aaPredicted RBP31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 TTLL11Q8NHH1 800 aa31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 DBNDD1Q9H9R9 158 aa31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 CREBZFQ9NS37 354 aa31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 GPRC5DQ9NZD1 345 aa31.39■■■□□ 2.62
TNFRSF4-201ENST00000379236 GMPSP49915 693 aaPredicted RBP31.38■■■□□ 2.61
TNFRSF4-201ENST00000379236 MAP1SQ66K74 1059 aaPredicted RBP31.38■■■□□ 2.61
TNFRSF4-201ENST00000379236 ADARB2Q9NS39 739 aaKnown RBP31.38■■■□□ 2.61
TNFRSF4-201ENST00000379236 PODXL2Q9NZ53 605 aa31.38■■■□□ 2.61
TNFRSF4-201ENST00000379236 ZNF521Q96K83 1311 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms