RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
PRPF18-202ENST00000378572 MPNDQ8N594 471 aa17.72■□□□□ 0.43
PRPF18-202ENST00000378572 DBF4Q9UBU7 674 aaPredicted RBP17.72■□□□□ 0.43
PRPF18-202ENST00000378572 LTBP1Q14766 1721 aa17.71■□□□□ 0.43
PRPF18-202ENST00000378572 BBOX1O75936 387 aa17.71■□□□□ 0.43
PRPF18-202ENST00000378572 SCNN1DP51172 638 aa17.71■□□□□ 0.43
PRPF18-202ENST00000378572 GRAPQ13588 217 aa17.71■□□□□ 0.43
PRPF18-202ENST00000378572 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
PRPF18-202ENST00000378572 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
PRPF18-202ENST00000378572 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
PRPF18-202ENST00000378572 HOXB7P09629 217 aa17.7■□□□□ 0.42
PRPF18-202ENST00000378572 VEGFBP49765 207 aa17.7■□□□□ 0.42
PRPF18-202ENST00000378572 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
PRPF18-202ENST00000378572 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
PRPF18-202ENST00000378572 APAF1O14727 1248 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
PRPF18-202ENST00000378572 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 ZNRF3Q9ULT6 936 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 GRM1Q13255 1194 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
PRPF18-202ENST00000378572 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
PRPF18-202ENST00000378572 USP50Q70EL3 339 aaPredicted RBP17.68■□□□□ 0.42
PRPF18-202ENST00000378572 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
PRPF18-202ENST00000378572 VPS33BQ9H267 617 aa17.68■□□□□ 0.42
PRPF18-202ENST00000378572 GMPSP49915 693 aaPredicted RBP17.67■□□□□ 0.42
PRPF18-202ENST00000378572 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
PRPF18-202ENST00000378572 DEFB115Q30KQ5 88 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
PRPF18-202ENST00000378572 TAF1P21675 1872 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 ELL2O00472 640 aaPredicted RBP17.67■□□□□ 0.42
PRPF18-202ENST00000378572 FOXN1O15353 648 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 RAD17O75943 681 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 CXCL9Q07325 125 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 TMC4Q7Z404 712 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
PRPF18-202ENST00000378572 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
PRPF18-202ENST00000378572 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
PRPF18-202ENST00000378572 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
PRPF18-202ENST00000378572 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
PRPF18-202ENST00000378572 CCDC27Q2M243 656 aa17.66■□□□□ 0.42
PRPF18-202ENST00000378572 GNAI1P63096 354 aa17.65■□□□□ 0.42
PRPF18-202ENST00000378572 TNIP1Q15025 636 aa17.65■□□□□ 0.42
PRPF18-202ENST00000378572 ISCA1Q9BUE6 129 aa17.65■□□□□ 0.42
PRPF18-202ENST00000378572 RASSF10A6NK89 507 aa17.64■□□□□ 0.41
PRPF18-202ENST00000378572 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
PRPF18-202ENST00000378572 TRAF5O00463 557 aa17.64■□□□□ 0.41
PRPF18-202ENST00000378572 CTCFP49711 727 aaPredicted RBP17.64■□□□□ 0.41
PRPF18-202ENST00000378572 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRPF18-202ENST00000378572 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
PRPF18-202ENST00000378572 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.41
PRPF18-202ENST00000378572 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
PRPF18-202ENST00000378572 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
PRPF18-202ENST00000378572 WDR33Q9C0J8 1336 aaKnown RBP17.63■□□□□ 0.41
PRPF18-202ENST00000378572 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
PRPF18-202ENST00000378572 MYD88Q99836 296 aa17.63■□□□□ 0.41
PRPF18-202ENST00000378572 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
PRPF18-202ENST00000378572 DUOX1Q9NRD9 1551 aa17.62■□□□□ 0.41
PRPF18-202ENST00000378572 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
PRPF18-202ENST00000378572 ZNF408Q9H9D4 720 aa17.62■□□□□ 0.41
PRPF18-202ENST00000378572 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
PRPF18-202ENST00000378572 DBNDD1Q9H9R9 158 aa17.61■□□□□ 0.41
PRPF18-202ENST00000378572 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
PRPF18-202ENST00000378572 CDHR2Q9BYE9 1310 aa17.61■□□□□ 0.41
PRPF18-202ENST00000378572 H7C1D1 291 aa17.61■□□□□ 0.41
PRPF18-202ENST00000378572 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
PRPF18-202ENST00000378572 ECE1P42892 770 aa17.61■□□□□ 0.41
PRPF18-202ENST00000378572 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
PRPF18-202ENST00000378572 CAPNS2Q96L46 248 aa17.61■□□□□ 0.41
PRPF18-202ENST00000378572 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
PRPF18-202ENST00000378572 G3V3G9 751 aa17.6■□□□□ 0.41
PRPF18-202ENST00000378572 CELF2O95319 508 aaKnown RBP17.6■□□□□ 0.41
PRPF18-202ENST00000378572 DDX58O95786 925 aaKnown RBP17.6■□□□□ 0.41
PRPF18-202ENST00000378572 GPSM2P81274 684 aa17.6■□□□□ 0.41
PRPF18-202ENST00000378572 MAP2K1Q02750 393 aaPredicted RBP17.6■□□□□ 0.41
PRPF18-202ENST00000378572 DCAF8Q5TAQ9 597 aa17.6■□□□□ 0.41
PRPF18-202ENST00000378572 CYP4F22Q6NT55 531 aa17.6■□□□□ 0.41
PRPF18-202ENST00000378572 EYA3Q99504 573 aa17.6■□□□□ 0.41
PRPF18-202ENST00000378572 BEGAINQ9BUH8 593 aa17.6■□□□□ 0.41
PRPF18-202ENST00000378572 GLIS2Q9BZE0 524 aaPredicted RBP17.6■□□□□ 0.41
PRPF18-202ENST00000378572 YDJCA8MPS7 323 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 LBX1P52954 281 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 MICALL2Q8IY33 904 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 TRPM4Q8TD43 1214 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 CCDC85AQ96PX6 553 aaPredicted RBP17.59■□□□□ 0.41
PRPF18-202ENST00000378572 WBP1LQ9NX94 342 aa17.59■□□□□ 0.41
PRPF18-202ENST00000378572 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
PRPF18-202ENST00000378572 DOK7Q18PE1 504 aa17.58■□□□□ 0.41
PRPF18-202ENST00000378572 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.41
PRPF18-202ENST00000378572 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.41
PRPF18-202ENST00000378572 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.41
PRPF18-202ENST00000378572 ZBTB12Q9Y330 459 aaPredicted RBP17.58■□□□□ 0.41
PRPF18-202ENST00000378572 ECE2O60344 883 aa17.58■□□□□ 0.4
PRPF18-202ENST00000378572 TRIM28Q13263 835 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms