RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RBM8AQ9Y5S9 174 aaKnown RBP22.82■■□□□ 1.24
PCDH8-202ENST00000377942 SLC9C2Q5TAH2 1124 aa22.82■■□□□ 1.24
PCDH8-202ENST00000377942 PA2G4Q9UQ80 394 aaKnown RBP22.82■■□□□ 1.24
PCDH8-202ENST00000377942 NOM1Q5C9Z4 860 aaKnown RBP22.82■■□□□ 1.24
PCDH8-202ENST00000377942 SLC4A4Q9Y6R1 1079 aa22.82■■□□□ 1.24
PCDH8-202ENST00000377942 TNNT3P45378 269 aaPredicted RBP22.81■■□□□ 1.24
PCDH8-202ENST00000377942 ZSCAN16Q9H4T2 348 aaPredicted RBP22.81■■□□□ 1.24
PCDH8-202ENST00000377942 GNAQP50148 359 aa22.81■■□□□ 1.24
PCDH8-202ENST00000377942 SLC52A2Q9HAB3 445 aa22.81■■□□□ 1.24
PCDH8-202ENST00000377942 TFCP2L1Q9NZI6 479 aa22.81■■□□□ 1.24
PCDH8-202ENST00000377942 RLBP1P12271 317 aa22.81■■□□□ 1.24
PCDH8-202ENST00000377942 PARP3Q9Y6F1 533 aa22.81■■□□□ 1.24
PCDH8-202ENST00000377942 METTL22Q9BUU2 404 aaPredicted RBP22.81■■□□□ 1.24
PCDH8-202ENST00000377942 SYCE3A1L190 88 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 PLCG2P16885 1265 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 SSFA2P28290 1259 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
PCDH8-202ENST00000377942 TTLL12Q14166 644 aaPredicted RBP22.8■■□□□ 1.24
PCDH8-202ENST00000377942 ZC3H12CQ9C0D7 883 aaKnown RBP22.8■■□□□ 1.24
PCDH8-202ENST00000377942 KDM5DQ9BY66 1539 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 PLEKHG1Q9ULL1 1385 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 FGFR1OPO95684 399 aaKnown RBP22.8■■□□□ 1.24
PCDH8-202ENST00000377942 BRF1Q92994 677 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 TSG101Q99816 390 aa22.8■■□□□ 1.24
PCDH8-202ENST00000377942 CCDC191Q8NCU4 936 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 RAD50Q92878 1312 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 EFCAB6Q5THR3 1501 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 TRAPPC3LQ5T215 181 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 TNPO1Q92973 898 aaKnown RBP22.79■■□□□ 1.24
PCDH8-202ENST00000377942 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 NBPF14Q5TI25 921 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 OGFOD1Q8N543 542 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 ZBTB43O43298 467 aa22.79■■□□□ 1.24
PCDH8-202ENST00000377942 KLF18A0A0U1RQI7 1052 aa22.78■■□□□ 1.24
PCDH8-202ENST00000377942 RNF113AO15541 343 aaKnown RBP22.78■■□□□ 1.24
PCDH8-202ENST00000377942 CFAP100Q494V2 611 aa22.78■■□□□ 1.24
PCDH8-202ENST00000377942 TCP11L1Q9NUJ3 509 aa22.78■■□□□ 1.24
PCDH8-202ENST00000377942 PPP4R3AQ6IN85 833 aa22.78■■□□□ 1.24
PCDH8-202ENST00000377942 EYA3Q99504 573 aa22.78■■□□□ 1.24
PCDH8-202ENST00000377942 CAMK4Q16566 473 aa22.78■■□□□ 1.24
PCDH8-202ENST00000377942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.78■■□□□ 1.24
PCDH8-202ENST00000377942 MTERF4Q7Z6M4 381 aaKnown RBP22.78■■□□□ 1.24
PCDH8-202ENST00000377942 SLC26A6Q9BXS9 759 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 TRIM35Q9UPQ4 493 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 BMP15O95972 392 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 CNNM3Q8NE01 707 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 ZNF397Q8NF99 534 aaPredicted RBP22.77■■□□□ 1.24
PCDH8-202ENST00000377942 ZBTB7BO15156 539 aaPredicted RBP22.77■■□□□ 1.24
PCDH8-202ENST00000377942 NBPF7P0C2Y1 421 aaPredicted RBP22.77■■□□□ 1.24
PCDH8-202ENST00000377942 FSIP1Q8NA03 581 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 TMX3Q96JJ7 454 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 STX8Q9UNK0 236 aa22.77■■□□□ 1.24
PCDH8-202ENST00000377942 SH3TC1Q8TE82 1336 aa22.77■■□□□ 1.23
PCDH8-202ENST00000377942 TSPY3P0CV98 308 aa22.76■■□□□ 1.23
PCDH8-202ENST00000377942 TSPY8P0CW00 308 aa22.76■■□□□ 1.23
PCDH8-202ENST00000377942 FILIP1Q7Z7B0 1213 aa22.76■■□□□ 1.23
PCDH8-202ENST00000377942 BICC1Q9H694 974 aaKnown RBP22.76■■□□□ 1.23
PCDH8-202ENST00000377942 AMPD3Q01432 767 aa22.76■■□□□ 1.23
PCDH8-202ENST00000377942 GNPATO15228 680 aa22.76■■□□□ 1.23
PCDH8-202ENST00000377942 IQSEC3Q9UPP2 1182 aaPredicted RBP22.76■■□□□ 1.23
PCDH8-202ENST00000377942 TNNQ9UQP3 1299 aa22.76■■□□□ 1.23
PCDH8-202ENST00000377942 MAGEB6P1A0A0J9YX57 407 aa22.75■■□□□ 1.23
PCDH8-202ENST00000377942 TFCP2Q12800 502 aa22.75■■□□□ 1.23
PCDH8-202ENST00000377942 NMIQ13287 307 aaPredicted RBP22.75■■□□□ 1.23
PCDH8-202ENST00000377942 CALML4Q96GE6 196 aa22.75■■□□□ 1.23
PCDH8-202ENST00000377942 MATR3P43243 847 aaKnown RBP eCLIP22.75■■□□□ 1.23
PCDH8-202ENST00000377942 KANK3Q6NY19 840 aa22.75■■□□□ 1.23
PCDH8-202ENST00000377942 IFIT1BQ5T764 474 aaKnown RBP22.75■■□□□ 1.23
PCDH8-202ENST00000377942 LARP6Q9BRS8 491 aaKnown RBP22.75■■□□□ 1.23
PCDH8-202ENST00000377942 RBM25P49756 843 aaKnown RBP22.75■■□□□ 1.23
PCDH8-202ENST00000377942 RBM27Q9P2N5 1060 aaKnown RBP22.75■■□□□ 1.23
PCDH8-202ENST00000377942 POLD1P28340 1107 aa22.74■■□□□ 1.23
PCDH8-202ENST00000377942 CCDC148Q8NFR7 591 aa22.74■■□□□ 1.23
PCDH8-202ENST00000377942 CCNL1Q9UK58 526 aaPredicted RBP22.74■■□□□ 1.23
PCDH8-202ENST00000377942 FKBP15Q5T1M5 1219 aa22.74■■□□□ 1.23
PCDH8-202ENST00000377942 C16orf71Q8IYS4 520 aaPredicted RBP22.74■■□□□ 1.23
PCDH8-202ENST00000377942 NSFL1CQ9UNZ2 370 aaKnown RBP22.74■■□□□ 1.23
PCDH8-202ENST00000377942 EYA2O00167 538 aa22.74■■□□□ 1.23
PCDH8-202ENST00000377942 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
PCDH8-202ENST00000377942 G2E3Q7L622 706 aa22.74■■□□□ 1.23
PCDH8-202ENST00000377942 LGR6Q9HBX8 967 aa22.74■■□□□ 1.23
PCDH8-202ENST00000377942 ERVV-2B6SEH9 535 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 CCDC144CPQ8IYA2 1237 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 KIAA0232Q92628 1395 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 RTN1Q16799 776 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 ZMYM4Q5VZL5 1548 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 VAT1LQ9HCJ6 419 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 LRRC27Q9C0I9 530 aa22.73■■□□□ 1.23
PCDH8-202ENST00000377942 MYOM2P54296 1465 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 ERLIN2O94905 339 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 CALM1P0DP23 149 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 CALM2P0DP24 149 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 CALM3P0DP25 149 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 CCDC181Q5TID7 509 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 PLEKHM2Q8IWE5 1019 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 CAVIN2O95810 425 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 DESP17661 470 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 UBA7P41226 1012 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 SNX21Q969T3 373 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms