RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ISCA1Q9BUE6 129 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 GPRC5DQ9NZD1 345 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 DBF4Q9UBU7 674 aaPredicted RBP22.75■■□□□ 1.23
HLA-A-201ENST00000376802 ZNRF3Q9ULT6 936 aa22.75■■□□□ 1.23
HLA-A-201ENST00000376802 DUOX1Q9NRD9 1551 aa22.74■■□□□ 1.23
HLA-A-201ENST00000376802 GRAPQ13588 217 aa22.74■■□□□ 1.23
HLA-A-201ENST00000376802 DUSP27Q5VZP5 1158 aa22.74■■□□□ 1.23
HLA-A-201ENST00000376802 USP50Q70EL3 339 aaPredicted RBP22.74■■□□□ 1.23
HLA-A-201ENST00000376802 DDX46Q7L014 1031 aaKnown RBP22.74■■□□□ 1.23
HLA-A-201ENST00000376802 GRAPLQ8TC17 118 aaPredicted RBP22.74■■□□□ 1.23
HLA-A-201ENST00000376802 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
HLA-A-201ENST00000376802 CAPN15O75808 1086 aa22.73■■□□□ 1.23
HLA-A-201ENST00000376802 ZNF853P0CG23 659 aa22.73■■□□□ 1.23
HLA-A-201ENST00000376802 KIAA2012Q0VF49 1180 aa22.73■■□□□ 1.23
HLA-A-201ENST00000376802 DEFB115Q30KQ5 88 aa22.73■■□□□ 1.23
HLA-A-201ENST00000376802 PRKRIP1Q9H875 184 aaPredicted RBP22.73■■□□□ 1.23
HLA-A-201ENST00000376802 COL4A1P02462 1669 aa22.73■■□□□ 1.23
HLA-A-201ENST00000376802 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
HLA-A-201ENST00000376802 FAM89AQ96GI7 184 aa22.72■■□□□ 1.23
HLA-A-201ENST00000376802 HYPKQ9NX55 129 aa22.71■■□□□ 1.23
HLA-A-201ENST00000376802 WBP1LQ9NX94 342 aa22.71■■□□□ 1.23
HLA-A-201ENST00000376802 GMPSP49915 693 aaPredicted RBP22.7■■□□□ 1.22
HLA-A-201ENST00000376802 SF3B3Q15393 1217 aaKnown RBP22.7■■□□□ 1.22
HLA-A-201ENST00000376802 CST9Q5W186 159 aa22.7■■□□□ 1.22
HLA-A-201ENST00000376802 TRAF5O00463 557 aa22.69■■□□□ 1.22
HLA-A-201ENST00000376802 TRIM28Q13263 835 aaKnown RBP22.69■■□□□ 1.22
HLA-A-201ENST00000376802 ADARB2Q9NS39 739 aaKnown RBP22.69■■□□□ 1.22
HLA-A-201ENST00000376802 WDR33Q9C0J8 1336 aaKnown RBP22.69■■□□□ 1.22
HLA-A-201ENST00000376802 YDJCA8MPS7 323 aa22.68■■□□□ 1.22
HLA-A-201ENST00000376802 APAF1O14727 1248 aa22.68■■□□□ 1.22
HLA-A-201ENST00000376802 CIAPIN1Q6FI81 312 aa22.68■■□□□ 1.22
HLA-A-201ENST00000376802 TMC4Q7Z404 712 aa22.68■■□□□ 1.22
HLA-A-201ENST00000376802 CELF1Q92879 486 aaKnown RBP22.68■■□□□ 1.22
HLA-A-201ENST00000376802 ABT1Q9ULW3 272 aaKnown RBP22.68■■□□□ 1.22
HLA-A-201ENST00000376802 RAD17O75943 681 aa22.67■■□□□ 1.22
HLA-A-201ENST00000376802 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
HLA-A-201ENST00000376802 CTCFP49711 727 aaPredicted RBP22.66■■□□□ 1.22
HLA-A-201ENST00000376802 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
HLA-A-201ENST00000376802 PHAXQ9H814 394 aaKnown RBP22.66■■□□□ 1.22
HLA-A-201ENST00000376802 PGAP2Q9UHJ9 254 aa22.66■■□□□ 1.22
HLA-A-201ENST00000376802 HIRAP54198 1017 aaPredicted RBP22.65■■□□□ 1.22
HLA-A-201ENST00000376802 TNIP1Q15025 636 aa22.65■■□□□ 1.22
HLA-A-201ENST00000376802 AIDAQ96BJ3 306 aa22.65■■□□□ 1.22
HLA-A-201ENST00000376802 IFT57Q9NWB7 429 aa22.65■■□□□ 1.22
HLA-A-201ENST00000376802 THSD7BQ9C0I4 1608 aa22.65■■□□□ 1.22
HLA-A-201ENST00000376802 CDHR2Q9BYE9 1310 aa22.65■■□□□ 1.22
HLA-A-201ENST00000376802 POLLQ9UGP5 575 aa22.64■■□□□ 1.22
HLA-A-201ENST00000376802 SHTN1A0MZ66 631 aa22.63■■□□□ 1.21
HLA-A-201ENST00000376802 ELL2O00472 640 aaPredicted RBP22.63■■□□□ 1.21
HLA-A-201ENST00000376802 IRS4O14654 1257 aaPredicted RBP22.63■■□□□ 1.21
HLA-A-201ENST00000376802 GNAI1P63096 354 aa22.63■■□□□ 1.21
HLA-A-201ENST00000376802 NSFL1CQ9UNZ2 370 aaKnown RBP22.63■■□□□ 1.21
HLA-A-201ENST00000376802 GPSM2P81274 684 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 WASHC4Q2M389 1173 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 RIC3Q7Z5B4 369 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 C8orf58Q8NAV2 365 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 TRPM4Q8TD43 1214 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 CAPNS2Q96L46 248 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 BCL2L13Q9BXK5 485 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 GLIS2Q9BZE0 524 aaPredicted RBP22.62■■□□□ 1.21
HLA-A-201ENST00000376802 TLL2Q9Y6L7 1015 aa22.62■■□□□ 1.21
HLA-A-201ENST00000376802 LBX1P52954 281 aa22.61■■□□□ 1.21
HLA-A-201ENST00000376802 MAP2K1Q02750 393 aaPredicted RBP22.61■■□□□ 1.21
HLA-A-201ENST00000376802 CNOT7Q9UIV1 285 aaKnown RBP22.61■■□□□ 1.21
HLA-A-201ENST00000376802 POLR2AP24928 1970 aaKnown RBP22.61■■□□□ 1.21
HLA-A-201ENST00000376802 RPS8P62241 208 aaKnown RBP22.6■■□□□ 1.21
HLA-A-201ENST00000376802 GOLGA2Q08379 1002 aa22.6■■□□□ 1.21
HLA-A-201ENST00000376802 CYP4F22Q6NT55 531 aa22.6■■□□□ 1.21
HLA-A-201ENST00000376802 ZBTB38Q8NAP3 1195 aaPredicted RBP22.6■■□□□ 1.21
HLA-A-201ENST00000376802 ZC3H15Q8WU90 426 aaKnown RBP22.6■■□□□ 1.21
HLA-A-201ENST00000376802 SCN9AQ15858 1988 aa22.6■■□□□ 1.21
HLA-A-201ENST00000376802 RIMBP2O15034 1052 aa22.59■■□□□ 1.21
HLA-A-201ENST00000376802 HSPA8P11142 646 aaKnown RBP22.59■■□□□ 1.21
HLA-A-201ENST00000376802 CALD1Q05682 793 aaKnown RBP22.59■■□□□ 1.21
HLA-A-201ENST00000376802 DBNDD1Q9H9R9 158 aa22.59■■□□□ 1.21
HLA-A-201ENST00000376802 SEC31BQ9NQW1 1179 aa22.59■■□□□ 1.21
HLA-A-201ENST00000376802 KCNQ5Q9NR82 932 aa22.59■■□□□ 1.21
HLA-A-201ENST00000376802 ZBTB12Q9Y330 459 aaPredicted RBP22.59■■□□□ 1.21
HLA-A-201ENST00000376802 PSMD14O00487 310 aa22.58■■□□□ 1.21
HLA-A-201ENST00000376802 SAPCD2Q86UD0 394 aa22.58■■□□□ 1.21
HLA-A-201ENST00000376802 MICALL2Q8IY33 904 aa22.58■■□□□ 1.21
HLA-A-201ENST00000376802 DPF2Q92785 391 aa22.58■■□□□ 1.21
HLA-A-201ENST00000376802 MYD88Q99836 296 aa22.58■■□□□ 1.21
HLA-A-201ENST00000376802 C6orf229H3BNL8 230 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 ECE1P42892 770 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 TBC1D16Q8TBP0 767 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 GPR101Q96P66 508 aaPredicted RBP22.57■■□□□ 1.2
HLA-A-201ENST00000376802 RTL9Q8NET4 1388 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 H7C1D1 291 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 CELF2O95319 508 aaKnown RBP22.57■■□□□ 1.2
HLA-A-201ENST00000376802 PCCAP05165 728 aaPredicted RBP22.57■■□□□ 1.2
HLA-A-201ENST00000376802 PAXIP1Q6ZW49 1069 aaPredicted RBP22.57■■□□□ 1.2
HLA-A-201ENST00000376802 TSPYL6Q8N831 410 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 CCDC191Q8NCU4 936 aa22.57■■□□□ 1.2
HLA-A-201ENST00000376802 ECE2O60344 883 aa22.56■■□□□ 1.2
HLA-A-201ENST00000376802 GRM1Q13255 1194 aa22.56■■□□□ 1.2
HLA-A-201ENST00000376802 DOK7Q18PE1 504 aa22.56■■□□□ 1.2
HLA-A-201ENST00000376802 CCDC184Q52MB2 194 aa22.56■■□□□ 1.2
HLA-A-201ENST00000376802 SAMD7Q7Z3H4 446 aa22.56■■□□□ 1.2
HLA-A-201ENST00000376802 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms