RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
HDAC6-204ENST00000376643 TNS4Q8IZW8 715 aa19.09■□□□□ 0.65
HDAC6-204ENST00000376643 ISCA1Q9BUE6 129 aa19.09■□□□□ 0.65
HDAC6-204ENST00000376643 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
HDAC6-204ENST00000376643 SCNN1DP51172 638 aa19.08■□□□□ 0.64
HDAC6-204ENST00000376643 SF3B3Q15393 1217 aaKnown RBP19.08■□□□□ 0.64
HDAC6-204ENST00000376643 COL13A1Q5TAT6 717 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-204ENST00000376643 MAP1SQ66K74 1059 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-204ENST00000376643 RIC3Q7Z5B4 369 aa19.08■□□□□ 0.64
HDAC6-204ENST00000376643 ADARB2Q9NS39 739 aaKnown RBP19.08■□□□□ 0.64
HDAC6-204ENST00000376643 APAF1O14727 1248 aa19.07■□□□□ 0.64
HDAC6-204ENST00000376643 DDX58O95786 925 aaKnown RBP19.07■□□□□ 0.64
HDAC6-204ENST00000376643 ZNF853P0CG23 659 aa19.07■□□□□ 0.64
HDAC6-204ENST00000376643 CIAPIN1Q6FI81 312 aa19.07■□□□□ 0.64
HDAC6-204ENST00000376643 GPRC5DQ9NZD1 345 aa19.07■□□□□ 0.64
HDAC6-204ENST00000376643 RASSF10A6NK89 507 aa19.06■□□□□ 0.64
HDAC6-204ENST00000376643 BCL2L13Q9BXK5 485 aa19.06■□□□□ 0.64
HDAC6-204ENST00000376643 ABT1Q9ULW3 272 aaKnown RBP19.06■□□□□ 0.64
HDAC6-204ENST00000376643 COL4A5P29400 1685 aa19.05■□□□□ 0.64
HDAC6-204ENST00000376643 EPS15P42566 896 aa19.05■□□□□ 0.64
HDAC6-204ENST00000376643 DEFB115Q30KQ5 88 aa19.05■□□□□ 0.64
HDAC6-204ENST00000376643 EYA3Q99504 573 aa19.05■□□□□ 0.64
HDAC6-204ENST00000376643 ECE1P42892 770 aa19.04■□□□□ 0.64
HDAC6-204ENST00000376643 CXCL9Q07325 125 aa19.04■□□□□ 0.64
HDAC6-204ENST00000376643 CCDC30Q5VVM6 783 aa19.04■□□□□ 0.64
HDAC6-204ENST00000376643 ZBTB38Q8NAP3 1195 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-204ENST00000376643 FAM89AQ96GI7 184 aa19.04■□□□□ 0.64
HDAC6-204ENST00000376643 LAMB2P55268 1798 aa19.04■□□□□ 0.64
HDAC6-204ENST00000376643 ATP5J2-PTCD1G3V325 749 aa19.03■□□□□ 0.64
HDAC6-204ENST00000376643 IRS4O14654 1257 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-204ENST00000376643 CTCFP49711 727 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-204ENST00000376643 VEGFBP49765 207 aa19.03■□□□□ 0.64
HDAC6-204ENST00000376643 MAP2K1Q02750 393 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-204ENST00000376643 WASHC4Q2M389 1173 aa19.03■□□□□ 0.64
HDAC6-204ENST00000376643 CCDC191Q8NCU4 936 aa19.03■□□□□ 0.64
HDAC6-204ENST00000376643 ZC3H15Q8WU90 426 aaKnown RBP19.03■□□□□ 0.64
HDAC6-204ENST00000376643 H7C1D1 291 aa19.02■□□□□ 0.64
HDAC6-204ENST00000376643 PRDM10Q9NQV6 1147 aa19.02■□□□□ 0.64
HDAC6-204ENST00000376643 NSFL1CQ9UNZ2 370 aaKnown RBP19.02■□□□□ 0.64
HDAC6-204ENST00000376643 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-204ENST00000376643 CCDC152Q4G0S7 254 aa19.01■□□□□ 0.63
HDAC6-204ENST00000376643 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
HDAC6-204ENST00000376643 RPS8P62241 208 aaKnown RBP19■□□□□ 0.63
HDAC6-204ENST00000376643 STK31Q9BXU1 1019 aa19■□□□□ 0.63
HDAC6-204ENST00000376643 CWC25Q9NXE8 425 aaPredicted RBP19■□□□□ 0.63
HDAC6-204ENST00000376643 LTBP1Q14766 1721 aa19■□□□□ 0.63
HDAC6-204ENST00000376643 C6orf229H3BNL8 230 aa18.99■□□□□ 0.63
HDAC6-204ENST00000376643 PCCAP05165 728 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-204ENST00000376643 RPS12P25398 132 aaKnown RBP18.99■□□□□ 0.63
HDAC6-204ENST00000376643 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
HDAC6-204ENST00000376643 DPF2Q92785 391 aa18.99■□□□□ 0.63
HDAC6-204ENST00000376643 BEGAINQ9BUH8 593 aa18.99■□□□□ 0.63
HDAC6-204ENST00000376643 WDR33Q9C0J8 1336 aaKnown RBP18.99■□□□□ 0.63
HDAC6-204ENST00000376643 DDX60Q8IY21 1712 aaKnown RBP18.98■□□□□ 0.63
HDAC6-204ENST00000376643 PDE8AO60658 829 aa18.98■□□□□ 0.63
HDAC6-204ENST00000376643 RAD17O75943 681 aa18.98■□□□□ 0.63
HDAC6-204ENST00000376643 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
HDAC6-204ENST00000376643 NEXNQ0ZGT2 675 aa18.98■□□□□ 0.63
HDAC6-204ENST00000376643 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
HDAC6-204ENST00000376643 CELF1Q92879 486 aaKnown RBP18.98■□□□□ 0.63
HDAC6-204ENST00000376643 MYD88Q99836 296 aa18.98■□□□□ 0.63
HDAC6-204ENST00000376643 PCNTO95613 3336 aa18.98■□□□□ 0.63
HDAC6-204ENST00000376643 G3V3G9 751 aa18.97■□□□□ 0.63
HDAC6-204ENST00000376643 ELL2O00472 640 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 RTL5Q5HYW3 569 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 DCAF8Q5TAQ9 597 aa18.97■□□□□ 0.63
HDAC6-204ENST00000376643 PAXIP1Q6ZW49 1069 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 CDC37L1Q7L3B6 337 aa18.97■□□□□ 0.63
HDAC6-204ENST00000376643 METTL22Q9BUU2 404 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 ZC3H12CQ9C0D7 883 aaKnown RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 WBP1LQ9NX94 342 aa18.97■□□□□ 0.63
HDAC6-204ENST00000376643 PGAP2Q9UHJ9 254 aa18.97■□□□□ 0.63
HDAC6-204ENST00000376643 CNOT7Q9UIV1 285 aaKnown RBP18.97■□□□□ 0.63
HDAC6-204ENST00000376643 FOXN1O15353 648 aa18.96■□□□□ 0.63
HDAC6-204ENST00000376643 SLC51AQ86UW1 340 aa18.96■□□□□ 0.63
HDAC6-204ENST00000376643 HHIPL1Q96JK4 782 aa18.96■□□□□ 0.63
HDAC6-204ENST00000376643 PODXL2Q9NZ53 605 aa18.96■□□□□ 0.63
HDAC6-204ENST00000376643 TLL2Q9Y6L7 1015 aa18.96■□□□□ 0.63
HDAC6-204ENST00000376643 DUOX1Q9NRD9 1551 aa18.95■□□□□ 0.62
HDAC6-204ENST00000376643 GPSM2P81274 684 aa18.95■□□□□ 0.62
HDAC6-204ENST00000376643 C8orf58Q8NAV2 365 aa18.95■□□□□ 0.62
HDAC6-204ENST00000376643 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
HDAC6-204ENST00000376643 CDC5LQ99459 802 aaKnown RBP18.95■□□□□ 0.62
HDAC6-204ENST00000376643 ANKIB1Q9P2G1 1089 aa18.95■□□□□ 0.62
HDAC6-204ENST00000376643 IL16Q14005 1332 aa18.95■□□□□ 0.62
HDAC6-204ENST00000376643 YDJCA8MPS7 323 aa18.94■□□□□ 0.62
HDAC6-204ENST00000376643 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
HDAC6-204ENST00000376643 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
HDAC6-204ENST00000376643 MICALL2Q8IY33 904 aa18.94■□□□□ 0.62
HDAC6-204ENST00000376643 TBC1D16Q8TBP0 767 aa18.94■□□□□ 0.62
HDAC6-204ENST00000376643 GGA1Q9UJY5 639 aa18.94■□□□□ 0.62
HDAC6-204ENST00000376643 ECE2O60344 883 aa18.93■□□□□ 0.62
HDAC6-204ENST00000376643 CELF2O95319 508 aaKnown RBP18.93■□□□□ 0.62
HDAC6-204ENST00000376643 MAP2K2P36507 400 aa18.93■□□□□ 0.62
HDAC6-204ENST00000376643 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
HDAC6-204ENST00000376643 DBNDD1Q9H9R9 158 aa18.93■□□□□ 0.62
HDAC6-204ENST00000376643 POLLQ9UGP5 575 aa18.93■□□□□ 0.62
HDAC6-204ENST00000376643 MAP3K2Q9Y2U5 619 aa18.93■□□□□ 0.62
HDAC6-204ENST00000376643 TRPM7Q96QT4 1865 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms