RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
NELFE-201ENST00000375425 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
NELFE-201ENST00000375425 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
NELFE-201ENST00000375425 CREBZFQ9NS37 354 aa18.38■□□□□ 0.53
NELFE-201ENST00000375425 SCN4AP35499 1836 aa18.37■□□□□ 0.53
NELFE-201ENST00000375425 IRS4O14654 1257 aaPredicted RBP18.37■□□□□ 0.53
NELFE-201ENST00000375425 ANP32CO43423 234 aa18.37■□□□□ 0.53
NELFE-201ENST00000375425 ITGBL1O95965 494 aaPredicted RBP18.37■□□□□ 0.53
NELFE-201ENST00000375425 MYD88Q99836 296 aa18.37■□□□□ 0.53
NELFE-201ENST00000375425 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
NELFE-201ENST00000375425 ANKRD36CQ5JPF3 1778 aa18.37■□□□□ 0.53
NELFE-201ENST00000375425 PASKQ96RG2 1323 aa18.36■□□□□ 0.53
NELFE-201ENST00000375425 LMOD1P29536 600 aaPredicted RBP18.36■□□□□ 0.53
NELFE-201ENST00000375425 EPS15P42566 896 aa18.36■□□□□ 0.53
NELFE-201ENST00000375425 SCNN1DP51172 638 aa18.36■□□□□ 0.53
NELFE-201ENST00000375425 TMC4Q7Z404 712 aa18.36■□□□□ 0.53
NELFE-201ENST00000375425 ZBTB38Q8NAP3 1195 aaPredicted RBP18.36■□□□□ 0.53
NELFE-201ENST00000375425 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
NELFE-201ENST00000375425 ZNRF3Q9ULT6 936 aa18.36■□□□□ 0.53
NELFE-201ENST00000375425 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
NELFE-201ENST00000375425 CNTROBQ8N137 903 aa18.35■□□□□ 0.53
NELFE-201ENST00000375425 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
NELFE-201ENST00000375425 CXCL9Q07325 125 aa18.34■□□□□ 0.53
NELFE-201ENST00000375425 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
NELFE-201ENST00000375425 MAP1SQ66K74 1059 aaPredicted RBP18.34■□□□□ 0.53
NELFE-201ENST00000375425 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
NELFE-201ENST00000375425 METTL22Q9BUU2 404 aaPredicted RBP18.33■□□□□ 0.53
NELFE-201ENST00000375425 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.53
NELFE-201ENST00000375425 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.53
NELFE-201ENST00000375425 HSP90B1P14625 803 aaKnown RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 CWC25Q9NXE8 425 aaPredicted RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 MAP3K2Q9Y2U5 619 aa18.32■□□□□ 0.52
NELFE-201ENST00000375425 LAMB2P55268 1798 aa18.32■□□□□ 0.52
NELFE-201ENST00000375425 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
NELFE-201ENST00000375425 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
NELFE-201ENST00000375425 STK31Q9BXU1 1019 aa18.32■□□□□ 0.52
NELFE-201ENST00000375425 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
NELFE-201ENST00000375425 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
NELFE-201ENST00000375425 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
NELFE-201ENST00000375425 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
NELFE-201ENST00000375425 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
NELFE-201ENST00000375425 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
NELFE-201ENST00000375425 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
NELFE-201ENST00000375425 GPRC5DQ9NZD1 345 aa18.31■□□□□ 0.52
NELFE-201ENST00000375425 IL16Q14005 1332 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 PDE8AO60658 829 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 RAD17O75943 681 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 GPSM2P81274 684 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 CIAPIN1Q6FI81 312 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 POLLQ9UGP5 575 aa18.3■□□□□ 0.52
NELFE-201ENST00000375425 TAF1P21675 1872 aa18.29■□□□□ 0.52
NELFE-201ENST00000375425 YDJCA8MPS7 323 aa18.29■□□□□ 0.52
NELFE-201ENST00000375425 C6orf229H3BNL8 230 aa18.29■□□□□ 0.52
NELFE-201ENST00000375425 GMPSP49915 693 aaPredicted RBP18.29■□□□□ 0.52
NELFE-201ENST00000375425 TNIP1Q15025 636 aa18.29■□□□□ 0.52
NELFE-201ENST00000375425 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
NELFE-201ENST00000375425 ADARB2Q9NS39 739 aaKnown RBP18.29■□□□□ 0.52
NELFE-201ENST00000375425 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
NELFE-201ENST00000375425 RIMBP2O15034 1052 aa18.28■□□□□ 0.52
NELFE-201ENST00000375425 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
NELFE-201ENST00000375425 HSPA1AP0DMV8 641 aaKnown RBP18.28■□□□□ 0.52
NELFE-201ENST00000375425 HSPA1BP0DMV9 641 aaKnown RBP18.28■□□□□ 0.52
NELFE-201ENST00000375425 G2E3Q7L622 706 aa18.28■□□□□ 0.52
NELFE-201ENST00000375425 CCDC85AQ96PX6 553 aaPredicted RBP18.28■□□□□ 0.52
NELFE-201ENST00000375425 BCL2L13Q9BXK5 485 aa18.28■□□□□ 0.52
NELFE-201ENST00000375425 LTBP1Q14766 1721 aa18.27■□□□□ 0.52
NELFE-201ENST00000375425 ADAMTSL1Q8N6G6 1762 aa18.27■□□□□ 0.52
NELFE-201ENST00000375425 WDR63Q8IWG1 891 aa18.27■□□□□ 0.52
NELFE-201ENST00000375425 CNTNAP1P78357 1384 aa18.27■□□□□ 0.52
NELFE-201ENST00000375425 NEXNQ0ZGT2 675 aa18.26■□□□□ 0.51
NELFE-201ENST00000375425 COL13A1Q5TAT6 717 aaPredicted RBP18.26■□□□□ 0.51
NELFE-201ENST00000375425 TBC1D16Q8TBP0 767 aa18.26■□□□□ 0.51
NELFE-201ENST00000375425 DBNDD1Q9H9R9 158 aa18.26■□□□□ 0.51
NELFE-201ENST00000375425 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.51
NELFE-201ENST00000375425 EYA3Q99504 573 aa18.25■□□□□ 0.51
NELFE-201ENST00000375425 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
NELFE-201ENST00000375425 COL4A1P02462 1669 aa18.25■□□□□ 0.51
NELFE-201ENST00000375425 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
NELFE-201ENST00000375425 CDHR2Q9BYE9 1310 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 VAMP4O75379 141 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 VEGFBP49765 207 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 DOK7Q18PE1 504 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 CWF19L2Q2TBE0 894 aaKnown RBP18.24■□□□□ 0.51
NELFE-201ENST00000375425 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 GPR101Q96P66 508 aaPredicted RBP18.24■□□□□ 0.51
NELFE-201ENST00000375425 PODXL2Q9NZ53 605 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 ANKIB1Q9P2G1 1089 aa18.24■□□□□ 0.51
NELFE-201ENST00000375425 CNOT7Q9UIV1 285 aaKnown RBP18.24■□□□□ 0.51
NELFE-201ENST00000375425 NEURL1BA8MQ27 555 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 ZC3H12CQ9C0D7 883 aaKnown RBP18.23■□□□□ 0.51
NELFE-201ENST00000375425 KCNQ5Q9NR82 932 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 ZBTB12Q9Y330 459 aaPredicted RBP18.23■□□□□ 0.51
NELFE-201ENST00000375425 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 H7C1D1 291 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms