RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 KLF18A0A0U1RQI7 1052 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 VAT1LQ9HCJ6 419 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
PTPDC1-202ENST00000375360 HMG20BQ9P0W2 317 aa20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 FILIP1Q7Z7B0 1213 aa20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 A0A1B0GUL7 405 aa20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 IARSP41252 1262 aaKnown RBP20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 R3HCC1Q9Y3T6 440 aaKnown RBP20.99■□□□□ 0.95
PTPDC1-202ENST00000375360 ZFYP08048 801 aaPredicted RBP20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 ST5P78524 1137 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 MAP3K11Q16584 847 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 PANK2Q9BZ23 570 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 NPHP4O75161 1426 aaPredicted RBP20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 USP6P35125 1406 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 EYA2O00167 538 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 OFD1O75665 1012 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 NAP1L1P55209 391 aaKnown RBP20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 DHX8Q14562 1220 aaKnown RBP20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 ITGA6P23229 1130 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 CCAR1Q8IX12 1150 aaKnown RBP20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 SH3TC1Q8TE82 1336 aa20.98■□□□□ 0.95
PTPDC1-202ENST00000375360 LDHCP07864 332 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 MCM5P33992 734 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 TTLL7Q6ZT98 887 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 CCNL1Q9UK58 526 aaPredicted RBP20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 ZGPATQ8N5A5 531 aaKnown RBP20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 PRAMEF22A3QJZ6 481 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 EPS15P42566 896 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 CCDC191Q8NCU4 936 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 ZNF335Q9H4Z2 1342 aaPredicted RBP20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 BAG3O95817 575 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 PROSER3Q2NL68 480 aa20.97■□□□□ 0.95
PTPDC1-202ENST00000375360 NAA16Q6N069 864 aaPredicted RBP20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 CCDC129Q6ZRS4 1044 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 CATIPQ7Z7H3 387 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 USP26Q9BXU7 913 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 METAP2P50579 478 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 CCDC96Q2M329 555 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 Q6ZUG5 572 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 TRMT2AQ8IZ69 625 aaKnown RBP20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 SLC26A6Q9BXS9 759 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 RBM27Q9P2N5 1060 aaKnown RBP20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 ZNF521Q96K83 1311 aa20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
PTPDC1-202ENST00000375360 CCDC173Q0VFZ6 552 aa20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 AATKQ6ZMQ8 1374 aa20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 SSRP1Q08945 709 aaKnown RBP20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 CEP57L1Q8IYX8 460 aa20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 EDC3Q96F86 508 aaKnown RBP20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 KIF1BO60333 1816 aa20.95■□□□□ 0.94
PTPDC1-202ENST00000375360 TAF5LO75529 589 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 FILIP1LQ4L180 1135 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 TNNI3KQ59H18 835 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 CREB3L3Q68CJ9 461 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 SEC63Q9UGP8 760 aaKnown RBP20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 FPGT-TNNI3KV9GXZ4 949 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 ANAPC15P60006 121 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 AK2P54819 239 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 MAGEB6Q8N7X4 407 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 FAM227BQ96M60 508 aa20.94■□□□□ 0.94
PTPDC1-202ENST00000375360 RNF113AO15541 343 aaKnown RBP20.93■□□□□ 0.94
PTPDC1-202ENST00000375360 ZNF76P36508 570 aa20.93■□□□□ 0.94
PTPDC1-202ENST00000375360 NLRP5P59047 1200 aa20.93■□□□□ 0.94
PTPDC1-202ENST00000375360 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
PTPDC1-202ENST00000375360 A2ML1A8K2U0 1454 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 PDE4BQ07343 736 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 NEURL1BA8MQ27 555 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 ABCC4O15439 1325 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 A0A0U1RQG5 324 aaPredicted RBP20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 SPTY2D1Q68D10 685 aaPredicted RBP20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 KLHL10Q6JEL2 608 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 SLF2Q8IX21 1173 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 CDCA7Q9BWT1 371 aaPredicted RBP20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 USP21Q9UK80 565 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 ARHGAP31Q2M1Z3 1444 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 RIMBP2O15034 1052 aa20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 MAGEC2Q9UBF1 373 aaPredicted RBP20.92■□□□□ 0.94
PTPDC1-202ENST00000375360 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
PTPDC1-202ENST00000375360 WTAPQ15007 396 aa20.91■□□□□ 0.94
PTPDC1-202ENST00000375360 ZC3H12CQ9C0D7 883 aaKnown RBP20.91■□□□□ 0.94
PTPDC1-202ENST00000375360 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.91■□□□□ 0.94
PTPDC1-202ENST00000375360 FSIP1Q8NA03 581 aa20.91■□□□□ 0.94
PTPDC1-202ENST00000375360 BIN1O00499 593 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 NYXQ9GZU5 481 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 CLTCL1P53675 1640 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 ZBTB43O43298 467 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 RXRAP19793 462 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 CCDC87Q9NVE4 849 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 TET3O43151 1660 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 ERVV-2B6SEH9 535 aa20.9■□□□□ 0.94
PTPDC1-202ENST00000375360 ERBB3P21860 1342 aa20.89■□□□□ 0.94
PTPDC1-202ENST00000375360 PRC1O43663 620 aa20.89■□□□□ 0.94
PTPDC1-202ENST00000375360 PICALMQ13492 652 aa20.89■□□□□ 0.94
PTPDC1-202ENST00000375360 ATP7BP35670 1465 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms