RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ZDHHC9Q9Y397 364 aa14.66□□□□□ -0.06
UBR4-203ENST00000375225 CCDC171Q6TFL3 1326 aa14.65□□□□□ -0.06
UBR4-203ENST00000375225 PKP1Q13835 747 aa14.65□□□□□ -0.06
UBR4-203ENST00000375225 TTC14Q96N46 770 aa14.65□□□□□ -0.06
UBR4-203ENST00000375225 FSD1Q9BTV5 496 aa14.65□□□□□ -0.06
UBR4-203ENST00000375225 SNRKQ9NRH2 765 aa14.65□□□□□ -0.06
UBR4-203ENST00000375225 PDRG1Q9NUG6 133 aa14.65□□□□□ -0.06
UBR4-203ENST00000375225 ONECUT3O60422 494 aaPredicted RBP14.64□□□□□ -0.07
UBR4-203ENST00000375225 SASH1O94885 1247 aa14.64□□□□□ -0.07
UBR4-203ENST00000375225 CASTP20810 708 aaKnown RBP14.64□□□□□ -0.07
UBR4-203ENST00000375225 KRT32Q14532 448 aa14.64□□□□□ -0.07
UBR4-203ENST00000375225 NUP188Q5SRE5 1749 aa14.64□□□□□ -0.07
UBR4-203ENST00000375225 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
UBR4-203ENST00000375225 DNAJC10Q8IXB1 793 aa14.64□□□□□ -0.07
UBR4-203ENST00000375225 ZNF831Q5JPB2 1677 aa14.64□□□□□ -0.07
UBR4-203ENST00000375225 LETM1O95202 739 aaPredicted RBP14.63□□□□□ -0.07
UBR4-203ENST00000375225 AK2P54819 239 aa14.63□□□□□ -0.07
UBR4-203ENST00000375225 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
UBR4-203ENST00000375225 LRP10Q7Z4F1 713 aa14.63□□□□□ -0.07
UBR4-203ENST00000375225 GAS2L3Q86XJ1 694 aa14.63□□□□□ -0.07
UBR4-203ENST00000375225 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
UBR4-203ENST00000375225 ZSWIM6Q9HCJ5 1215 aa14.63□□□□□ -0.07
UBR4-203ENST00000375225 A1BGP04217 495 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 PIP4K2AP48426 406 aaPredicted RBP14.62□□□□□ -0.07
UBR4-203ENST00000375225 RABL6Q3YEC7 729 aaPredicted RBP14.62□□□□□ -0.07
UBR4-203ENST00000375225 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 SEPT12Q8IYM1 358 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 EAF2Q96CJ1 260 aaPredicted RBP14.62□□□□□ -0.07
UBR4-203ENST00000375225 KAZALD1Q96I82 304 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 PPP1R9BQ96SB3 815 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 BTAF1O14981 1849 aa14.62□□□□□ -0.07
UBR4-203ENST00000375225 NBPF26B4DH59 902 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 ZSCAN22P10073 491 aaPredicted RBP14.61□□□□□ -0.07
UBR4-203ENST00000375225 ATP5JP18859 108 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 PDCP20941 246 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 CLCN1P35523 988 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 NBPF14Q5TI25 921 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
UBR4-203ENST00000375225 NBPF10Q6P3W6 841 aaKnown RBP14.61□□□□□ -0.07
UBR4-203ENST00000375225 RUFY3Q7L099 469 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 NBPF15Q8N660 670 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 TMEM87AQ8NBN3 555 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 MAP4K1Q92918 833 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
UBR4-203ENST00000375225 SBF2Q86WG5 1849 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 A0A087WZG4 1122 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 NECTIN1Q15223 517 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 HS1BP3Q53T59 392 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 CREB3L3Q68CJ9 461 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 SIL1Q9H173 461 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 IL25Q9H293 177 aa14.61□□□□□ -0.07
UBR4-203ENST00000375225 ALDH8A1Q9H2A2 487 aaPredicted RBP14.61□□□□□ -0.07
UBR4-203ENST00000375225 RBM8AQ9Y5S9 174 aaKnown RBP14.61□□□□□ -0.07
UBR4-203ENST00000375225 ESPNB1AK53 854 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 STX6O43752 255 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 CYP19A1P11511 503 aaPredicted RBP14.6□□□□□ -0.07
UBR4-203ENST00000375225 NMIQ13287 307 aaPredicted RBP14.6□□□□□ -0.07
UBR4-203ENST00000375225 LRRFIP1Q32MZ4 808 aaKnown RBP14.6□□□□□ -0.07
UBR4-203ENST00000375225 BLOC1S2Q6QNY1 142 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 GPT2Q8TD30 523 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 GPR108Q9NPR9 543 aa14.6□□□□□ -0.07
UBR4-203ENST00000375225 COL5A3P25940 1745 aaPredicted RBP14.59□□□□□ -0.07
UBR4-203ENST00000375225 LOC102724428A0A0B4J2F2 783 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 ATP6V1AP38606 617 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 SIK1P57059 783 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 TNNI3KQ59H18 835 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 FOXD4L5Q5VV16 416 aaPredicted RBP14.59□□□□□ -0.07
UBR4-203ENST00000375225 UBE3BQ7Z3V4 1068 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 RASEFQ8IZ41 740 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 FOXD4L4Q8WXT5 416 aaPredicted RBP14.59□□□□□ -0.07
UBR4-203ENST00000375225 CWC25Q9NXE8 425 aaPredicted RBP14.59□□□□□ -0.07
UBR4-203ENST00000375225 FPGT-TNNI3KV9GXZ4 949 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 RREB1Q92766 1687 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
UBR4-203ENST00000375225 KCNQ2O43526 872 aa14.58□□□□□ -0.08
UBR4-203ENST00000375225 PTH1RQ03431 593 aa14.58□□□□□ -0.08
UBR4-203ENST00000375225 TSGA10IPQ3SY00 556 aa14.58□□□□□ -0.08
UBR4-203ENST00000375225 FAM184AQ8NB25 1140 aa14.58□□□□□ -0.08
UBR4-203ENST00000375225 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
UBR4-203ENST00000375225 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.08
UBR4-203ENST00000375225 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
UBR4-203ENST00000375225 MED23Q9ULK4 1368 aa14.57□□□□□ -0.08
UBR4-203ENST00000375225 SLC27A2O14975 620 aa14.57□□□□□ -0.08
UBR4-203ENST00000375225 PTPN12Q05209 780 aaKnown RBP14.57□□□□□ -0.08
UBR4-203ENST00000375225 CCDC191Q8NCU4 936 aa14.57□□□□□ -0.08
UBR4-203ENST00000375225 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
UBR4-203ENST00000375225 TSPY26PQ9H489 355 aa14.57□□□□□ -0.08
UBR4-203ENST00000375225 RPAP1Q9BWH6 1393 aaPredicted RBP14.57□□□□□ -0.08
UBR4-203ENST00000375225 F13A1P00488 732 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 IL6STP40189 918 aaPredicted RBP14.56□□□□□ -0.08
UBR4-203ENST00000375225 IL15P40933 162 aaPredicted RBP14.56□□□□□ -0.08
UBR4-203ENST00000375225 RFX5P48382 616 aaPredicted RBP14.56□□□□□ -0.08
UBR4-203ENST00000375225 UBE2HP62256 183 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
UBR4-203ENST00000375225 TTLL7Q6ZT98 887 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 RRAGDQ9NQL2 400 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms