RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 PCDH11YQ9BZA8 1340 aa19.96■□□□□ 0.79
HDAC8-206ENST00000373571 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
HDAC8-206ENST00000373571 TAF5LO75529 589 aa19.96■□□□□ 0.79
HDAC8-206ENST00000373571 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
HDAC8-206ENST00000373571 NBPF10Q6P3W6 841 aaKnown RBP19.96■□□□□ 0.79
HDAC8-206ENST00000373571 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
HDAC8-206ENST00000373571 RPS6KB1P23443 525 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 ANKRD1Q15327 319 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 CCDC183Q5T5S1 534 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 LMBR1LQ6UX01 489 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 DBNDD2Q9BQY9 259 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 TAF6LQ9Y6J9 622 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 RFX7Q2KHR2 1363 aa19.95■□□□□ 0.78
HDAC8-206ENST00000373571 VPS37CA5D8V6 355 aaPredicted RBP19.94■□□□□ 0.78
HDAC8-206ENST00000373571 TCEANC2Q96MN5 208 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 DNAJC2Q99543 621 aaKnown RBP19.94■□□□□ 0.78
HDAC8-206ENST00000373571 CHMP3Q9Y3E7 222 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 NDUFB9Q9Y6M9 179 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 WDR17Q8IZU2 1322 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 CSPP1Q1MSJ5 1256 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 TSGA10IPQ3SY00 556 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 TPRNQ4KMQ1 711 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 TOM1L2Q6ZVM7 507 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 ZCRB1Q8TBF4 217 aaKnown RBP19.94■□□□□ 0.78
HDAC8-206ENST00000373571 ALDH8A1Q9H2A2 487 aaPredicted RBP19.94■□□□□ 0.78
HDAC8-206ENST00000373571 UBR2Q8IWV8 1755 aa19.94■□□□□ 0.78
HDAC8-206ENST00000373571 NUP188Q5SRE5 1749 aa19.93■□□□□ 0.78
HDAC8-206ENST00000373571 DNM1Q05193 864 aaKnown RBP19.93■□□□□ 0.78
HDAC8-206ENST00000373571 PRDM11Q9NQV5 511 aa19.93■□□□□ 0.78
HDAC8-206ENST00000373571 H7C1W4 665 aa19.93■□□□□ 0.78
HDAC8-206ENST00000373571 FOXO4P98177 505 aa19.93■□□□□ 0.78
HDAC8-206ENST00000373571 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
HDAC8-206ENST00000373571 HAUS7Q99871 368 aa19.93■□□□□ 0.78
HDAC8-206ENST00000373571 TOB2Q14106 344 aaPredicted RBP19.92■□□□□ 0.78
HDAC8-206ENST00000373571 TTLL7Q6ZT98 887 aa19.92■□□□□ 0.78
HDAC8-206ENST00000373571 BRINP3Q76B58 766 aa19.92■□□□□ 0.78
HDAC8-206ENST00000373571 ZNF609O15014 1411 aa19.92■□□□□ 0.78
HDAC8-206ENST00000373571 XIRP1Q702N8 1843 aaKnown RBP19.92■□□□□ 0.78
HDAC8-206ENST00000373571 LARP1BQ659C4 914 aaKnown RBP19.91■□□□□ 0.78
HDAC8-206ENST00000373571 CWC25Q9NXE8 425 aaPredicted RBP19.91■□□□□ 0.78
HDAC8-206ENST00000373571 NOL7Q9UMY1 257 aaKnown RBP19.91■□□□□ 0.78
HDAC8-206ENST00000373571 TJP1Q07157 1748 aa19.91■□□□□ 0.78
HDAC8-206ENST00000373571 ERVV-2B6SEH9 535 aa19.91■□□□□ 0.78
HDAC8-206ENST00000373571 LETM1O95202 739 aaPredicted RBP19.91■□□□□ 0.78
HDAC8-206ENST00000373571 KRT32Q14532 448 aa19.91■□□□□ 0.78
HDAC8-206ENST00000373571 KCPQ6ZWJ8 1503 aa19.91■□□□□ 0.78
HDAC8-206ENST00000373571 PDIA4P13667 645 aaKnown RBP19.9■□□□□ 0.78
HDAC8-206ENST00000373571 CCDC129Q6ZRS4 1044 aa19.9■□□□□ 0.78
HDAC8-206ENST00000373571 DDX46Q7L014 1031 aaKnown RBP19.9■□□□□ 0.78
HDAC8-206ENST00000373571 PAPPAQ13219 1627 aa19.9■□□□□ 0.78
HDAC8-206ENST00000373571 A1BGP04217 495 aa19.9■□□□□ 0.78
HDAC8-206ENST00000373571 CHGBP05060 677 aa19.9■□□□□ 0.78
HDAC8-206ENST00000373571 SEC62Q99442 399 aaKnown RBP19.9■□□□□ 0.78
HDAC8-206ENST00000373571 COL5A2P05997 1499 aaPredicted RBP19.89■□□□□ 0.77
HDAC8-206ENST00000373571 PDCP20941 246 aa19.89■□□□□ 0.77
HDAC8-206ENST00000373571 MCMDC2Q4G0Z9 681 aa19.89■□□□□ 0.77
HDAC8-206ENST00000373571 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
HDAC8-206ENST00000373571 CCDC9Q9Y3X0 531 aaKnown RBP19.89■□□□□ 0.77
HDAC8-206ENST00000373571 CDC37L1Q7L3B6 337 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 ATG9AQ7Z3C6 839 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 U3KPZ7 1027 aaPredicted RBP19.88■□□□□ 0.77
HDAC8-206ENST00000373571 KBTBD3Q8NAB2 608 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 NEUROD6Q96NK8 337 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 NEK1Q96PY6 1258 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 ZBTB3Q9H5J0 574 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.88■□□□□ 0.77
HDAC8-206ENST00000373571 CCDC39Q9UFE4 941 aa19.88■□□□□ 0.77
HDAC8-206ENST00000373571 HSPA2P54652 639 aa19.87■□□□□ 0.77
HDAC8-206ENST00000373571 STK3Q13188 491 aa19.87■□□□□ 0.77
HDAC8-206ENST00000373571 IL2RBP14784 551 aa19.87■□□□□ 0.77
HDAC8-206ENST00000373571 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
HDAC8-206ENST00000373571 CCDC191Q8NCU4 936 aa19.87■□□□□ 0.77
HDAC8-206ENST00000373571 PALLDQ8WX93 1383 aa19.86■□□□□ 0.77
HDAC8-206ENST00000373571 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
HDAC8-206ENST00000373571 UVSSAQ2YD98 709 aa19.86■□□□□ 0.77
HDAC8-206ENST00000373571 GPR108Q9NPR9 543 aa19.86■□□□□ 0.77
HDAC8-206ENST00000373571 SHANK3Q9BYB0 1731 aa19.85■□□□□ 0.77
HDAC8-206ENST00000373571 IL15P40933 162 aaPredicted RBP19.85■□□□□ 0.77
HDAC8-206ENST00000373571 KRT85P78386 507 aa19.85■□□□□ 0.77
HDAC8-206ENST00000373571 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
HDAC8-206ENST00000373571 ZKSCAN5Q9Y2L8 839 aa19.85■□□□□ 0.77
HDAC8-206ENST00000373571 CYP21A2P08686 494 aa19.85■□□□□ 0.77
HDAC8-206ENST00000373571 PAG1Q9NWQ8 432 aa19.85■□□□□ 0.77
HDAC8-206ENST00000373571 GOLIM4O00461 696 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 TIMM10P62072 90 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 SOS2Q07890 1332 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-206ENST00000373571 TNS2Q63HR2 1409 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 ZNF500O60304 480 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-206ENST00000373571 HCLS1P14317 486 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-206ENST00000373571 LRRC24Q50LG9 513 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 Q6ZUG5 572 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 GTF3C6Q969F1 213 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 ZNF594Q96JF6 807 aaPredicted RBP19.84■□□□□ 0.77
HDAC8-206ENST00000373571 CARD10Q9BWT7 1032 aa19.84■□□□□ 0.77
HDAC8-206ENST00000373571 EYA2O00167 538 aa19.83■□□□□ 0.77
HDAC8-206ENST00000373571 TTC6Q86TZ1 520 aa19.83■□□□□ 0.77
HDAC8-206ENST00000373571 OFD1O75665 1012 aa19.82■□□□□ 0.76
HDAC8-206ENST00000373571 HSP90B1P14625 803 aaKnown RBP19.82■□□□□ 0.76
HDAC8-206ENST00000373571 MCM5P33992 734 aa19.82■□□□□ 0.76
HDAC8-206ENST00000373571 FAM173BQ6P4H8 233 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms