RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 UPF3BQ9BZI7 483 aaKnown RBP23.68■■□□□ 1.38
HDAC1-201ENST00000373548 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 ZNF609O15014 1411 aa23.67■■□□□ 1.38
HDAC1-201ENST00000373548 MYH3P11055 1940 aa23.67■■□□□ 1.38
HDAC1-201ENST00000373548 EIF5P55010 431 aaKnown RBP23.67■■□□□ 1.38
HDAC1-201ENST00000373548 FAM98CQ17RN3 349 aaKnown RBP23.67■■□□□ 1.38
HDAC1-201ENST00000373548 RASEFQ8IZ41 740 aa23.67■■□□□ 1.38
HDAC1-201ENST00000373548 NGLY1Q96IV0 654 aa23.67■■□□□ 1.38
HDAC1-201ENST00000373548 CCDC87Q9NVE4 849 aa23.67■■□□□ 1.38
HDAC1-201ENST00000373548 A0A0D9SFI3 127 aa23.66■■□□□ 1.38
HDAC1-201ENST00000373548 VPS72Q15906 364 aa23.66■■□□□ 1.38
HDAC1-201ENST00000373548 MYH14Q7Z406 1995 aaKnown RBP23.66■■□□□ 1.38
HDAC1-201ENST00000373548 CCDC171Q6TFL3 1326 aa23.66■■□□□ 1.38
HDAC1-201ENST00000373548 CRKLP46109 303 aaKnown RBP23.66■■□□□ 1.38
HDAC1-201ENST00000373548 TMX3Q96JJ7 454 aa23.66■■□□□ 1.38
HDAC1-201ENST00000373548 HAUS7Q99871 368 aa23.66■■□□□ 1.38
HDAC1-201ENST00000373548 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
HDAC1-201ENST00000373548 ITPK1Q13572 414 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 NEUROD6Q96NK8 337 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 CCDC85AQ96PX6 553 aaPredicted RBP23.65■■□□□ 1.38
HDAC1-201ENST00000373548 NDUFB9Q9Y6M9 179 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 KCNQ2O43526 872 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 TIMM10P62072 90 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 GSE1Q14687 1217 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 FBXO3Q9UK99 471 aa23.65■■□□□ 1.38
HDAC1-201ENST00000373548 ZGPATQ8N5A5 531 aaKnown RBP23.64■■□□□ 1.37
HDAC1-201ENST00000373548 MED23Q9ULK4 1368 aa23.64■■□□□ 1.37
HDAC1-201ENST00000373548 ZNF34Q8IZ26 560 aa23.63■■□□□ 1.37
HDAC1-201ENST00000373548 IL27Q8NEV9 243 aa23.63■■□□□ 1.37
HDAC1-201ENST00000373548 DNAJC2Q99543 621 aaKnown RBP23.63■■□□□ 1.37
HDAC1-201ENST00000373548 UBN2Q6ZU65 1347 aa23.63■■□□□ 1.37
HDAC1-201ENST00000373548 RFX7Q2KHR2 1363 aa23.63■■□□□ 1.37
HDAC1-201ENST00000373548 CWC22Q9HCG8 908 aaKnown RBP23.63■■□□□ 1.37
HDAC1-201ENST00000373548 SSFA2P28290 1259 aa23.62■■□□□ 1.37
HDAC1-201ENST00000373548 IFIT5Q13325 482 aaKnown RBP23.62■■□□□ 1.37
HDAC1-201ENST00000373548 TTLL11Q8NHH1 800 aa23.62■■□□□ 1.37
HDAC1-201ENST00000373548 KCNB2Q92953 911 aa23.62■■□□□ 1.37
HDAC1-201ENST00000373548 CEP126Q9P2H0 1117 aa23.62■■□□□ 1.37
HDAC1-201ENST00000373548 TRMT112Q9UI30 125 aaKnown RBP23.62■■□□□ 1.37
HDAC1-201ENST00000373548 A0A1B0GUL7 405 aa23.62■■□□□ 1.37
HDAC1-201ENST00000373548 FNBP4Q8N3X1 1017 aaPredicted RBP23.62■■□□□ 1.37
HDAC1-201ENST00000373548 COL5A3P25940 1745 aaPredicted RBP23.62■■□□□ 1.37
HDAC1-201ENST00000373548 IRS4O14654 1257 aaPredicted RBP23.61■■□□□ 1.37
HDAC1-201ENST00000373548 CTSWP56202 376 aa23.61■■□□□ 1.37
HDAC1-201ENST00000373548 CUL4AQ13619 759 aa23.61■■□□□ 1.37
HDAC1-201ENST00000373548 NECTIN1Q15223 517 aa23.61■■□□□ 1.37
HDAC1-201ENST00000373548 PRPF40BQ6NWY9 871 aaKnown RBP23.61■■□□□ 1.37
HDAC1-201ENST00000373548 MAP4K1Q92918 833 aa23.61■■□□□ 1.37
HDAC1-201ENST00000373548 SMARCC1Q92922 1105 aaPredicted RBP23.61■■□□□ 1.37
HDAC1-201ENST00000373548 NOL8Q76FK4 1167 aaKnown RBP23.6■■□□□ 1.37
HDAC1-201ENST00000373548 RBM8AQ9Y5S9 174 aaKnown RBP23.6■■□□□ 1.37
HDAC1-201ENST00000373548 TAF7LQ5H9L4 462 aa23.6■■□□□ 1.37
HDAC1-201ENST00000373548 TTC14Q96N46 770 aa23.6■■□□□ 1.37
HDAC1-201ENST00000373548 GREM2Q9H772 168 aa23.6■■□□□ 1.37
HDAC1-201ENST00000373548 DDX46Q7L014 1031 aaKnown RBP23.59■■□□□ 1.37
HDAC1-201ENST00000373548 ZNF589Q86UQ0 364 aaPredicted RBP23.59■■□□□ 1.37
HDAC1-201ENST00000373548 ZNF831Q5JPB2 1677 aa23.59■■□□□ 1.37
HDAC1-201ENST00000373548 DDX11L8A8MPP1 907 aa23.59■■□□□ 1.37
HDAC1-201ENST00000373548 GBP4Q96PP9 640 aa23.59■■□□□ 1.37
HDAC1-201ENST00000373548 CYP2E1P05181 493 aaPredicted RBP23.58■■□□□ 1.37
HDAC1-201ENST00000373548 ITGA6P23229 1130 aa23.58■■□□□ 1.37
HDAC1-201ENST00000373548 NUCB2P80303 420 aa23.58■■□□□ 1.37
HDAC1-201ENST00000373548 KBTBD3Q8NAB2 608 aa23.58■■□□□ 1.37
HDAC1-201ENST00000373548 RIC1Q4ADV7 1423 aa23.58■■□□□ 1.37
HDAC1-201ENST00000373548 PDE8AO60658 829 aa23.57■■□□□ 1.36
HDAC1-201ENST00000373548 CAMTA2O94983 1202 aa23.57■■□□□ 1.36
HDAC1-201ENST00000373548 CREB3L3Q68CJ9 461 aa23.57■■□□□ 1.36
HDAC1-201ENST00000373548 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
HDAC1-201ENST00000373548 AKAP2Q9Y2D5 859 aa23.57■■□□□ 1.36
HDAC1-201ENST00000373548 SPEF2Q9C093 1822 aa23.57■■□□□ 1.36
HDAC1-201ENST00000373548 CHGBP05060 677 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 PKP1Q13835 747 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 ADCK5Q3MIX3 580 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 CLEC17AQ6ZS10 378 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 RIPOR2Q9Y4F9 1068 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 GOLIM4O00461 696 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 CASTP20810 708 aaKnown RBP23.56■■□□□ 1.36
HDAC1-201ENST00000373548 KCNJ4P48050 445 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 TM6SF1Q9BZW5 370 aa23.56■■□□□ 1.36
HDAC1-201ENST00000373548 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
HDAC1-201ENST00000373548 TAF5LO75529 589 aa23.55■■□□□ 1.36
HDAC1-201ENST00000373548 SUSD4Q5VX71 490 aa23.55■■□□□ 1.36
HDAC1-201ENST00000373548 INTS4Q96HW7 963 aaKnown RBP23.55■■□□□ 1.36
HDAC1-201ENST00000373548 JAKMIP1Q96N16 626 aaKnown RBP23.55■■□□□ 1.36
HDAC1-201ENST00000373548 SLC27A2O14975 620 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 IFIT1P09914 478 aaKnown RBP23.54■■□□□ 1.36
HDAC1-201ENST00000373548 CPA1P15085 419 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 ADORA1P30542 326 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 AK2P54819 239 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.54■■□□□ 1.36
HDAC1-201ENST00000373548 USP21Q9UK80 565 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
HDAC1-201ENST00000373548 LDHAL6AQ6ZMR3 332 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 XAGE2Q96GT9 111 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 ZSWIM6Q9HCJ5 1215 aa23.54■■□□□ 1.36
HDAC1-201ENST00000373548 BCORQ6W2J9 1755 aa23.53■■□□□ 1.36
HDAC1-201ENST00000373548 TRAK2O60296 914 aa23.53■■□□□ 1.36
HDAC1-201ENST00000373548 SEC62Q99442 399 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms