RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 GPR162Q16538 588 aa25.6■■□□□ 1.69
SYNC-201ENST00000373484 UTRNP46939 3433 aa25.6■■□□□ 1.69
SYNC-201ENST00000373484 DALRD3Q5D0E6 543 aaKnown RBP25.6■■□□□ 1.69
SYNC-201ENST00000373484 TTLL6Q8N841 843 aa25.6■■□□□ 1.69
SYNC-201ENST00000373484 FRAT1Q92837 279 aaPredicted RBP25.6■■□□□ 1.69
SYNC-201ENST00000373484 TAF1P21675 1872 aa25.6■■□□□ 1.69
SYNC-201ENST00000373484 HSP90B1P14625 803 aaKnown RBP25.59■■□□□ 1.69
SYNC-201ENST00000373484 BCS1LQ9Y276 419 aa25.59■■□□□ 1.69
SYNC-201ENST00000373484 CASP7P55210 303 aa25.58■■□□□ 1.69
SYNC-201ENST00000373484 ATF7IPQ6VMQ6 1270 aa25.58■■□□□ 1.69
SYNC-201ENST00000373484 UBE3BQ7Z3V4 1068 aa25.58■■□□□ 1.69
SYNC-201ENST00000373484 CNKSR1Q969H4 720 aa25.58■■□□□ 1.69
SYNC-201ENST00000373484 DCAF8L1A6NGE4 600 aa25.58■■□□□ 1.68
SYNC-201ENST00000373484 TRIM27P14373 513 aa25.58■■□□□ 1.68
SYNC-201ENST00000373484 HOXA10P31260 410 aaPredicted RBP25.58■■□□□ 1.68
SYNC-201ENST00000373484 FAM161AQ3B820 660 aa25.58■■□□□ 1.68
SYNC-201ENST00000373484 RPGRQ92834 1020 aaKnown RBP25.58■■□□□ 1.68
SYNC-201ENST00000373484 ABCC4O15439 1325 aa25.57■■□□□ 1.68
SYNC-201ENST00000373484 PDE8AO60658 829 aa25.56■■□□□ 1.68
SYNC-201ENST00000373484 SF3B3Q15393 1217 aaKnown RBP25.56■■□□□ 1.68
SYNC-201ENST00000373484 ZKSCAN2Q63HK3 967 aa25.56■■□□□ 1.68
SYNC-201ENST00000373484 GRM8O00222 908 aa25.56■■□□□ 1.68
SYNC-201ENST00000373484 CCT4P50991 539 aaKnown RBP25.56■■□□□ 1.68
SYNC-201ENST00000373484 ALDH1B1P30837 517 aa25.55■■□□□ 1.68
SYNC-201ENST00000373484 RBM17Q96I25 401 aaKnown RBP25.55■■□□□ 1.68
SYNC-201ENST00000373484 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
SYNC-201ENST00000373484 CRAMP1Q96RY5 1269 aa25.54■■□□□ 1.68
SYNC-201ENST00000373484 C9orf78Q9NZ63 289 aaPredicted RBP25.54■■□□□ 1.68
SYNC-201ENST00000373484 TNNQ9UQP3 1299 aa25.54■■□□□ 1.68
SYNC-201ENST00000373484 PLA2G12BQ9BX93 195 aa25.53■■□□□ 1.68
SYNC-201ENST00000373484 UTYO14607 1347 aa25.53■■□□□ 1.68
SYNC-201ENST00000373484 CHD4Q14839 1912 aa25.53■■□□□ 1.68
SYNC-201ENST00000373484 GRIN3BO60391 1043 aa25.53■■□□□ 1.68
SYNC-201ENST00000373484 INTS3Q68E01 1043 aaKnown RBP25.52■■□□□ 1.68
SYNC-201ENST00000373484 FER1L6Q2WGJ9 1857 aa25.52■■□□□ 1.68
SYNC-201ENST00000373484 CTSWP56202 376 aa25.51■■□□□ 1.67
SYNC-201ENST00000373484 DDX46Q7L014 1031 aaKnown RBP25.51■■□□□ 1.67
SYNC-201ENST00000373484 NBPF7P0C2Y1 421 aaPredicted RBP25.5■■□□□ 1.67
SYNC-201ENST00000373484 C20orf194Q5TEA3 1177 aa25.5■■□□□ 1.67
SYNC-201ENST00000373484 CLUAP1Q96AJ1 413 aa25.5■■□□□ 1.67
SYNC-201ENST00000373484 USP44Q9H0E7 712 aa25.5■■□□□ 1.67
SYNC-201ENST00000373484 COL4A1P02462 1669 aa25.5■■□□□ 1.67
SYNC-201ENST00000373484 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
SYNC-201ENST00000373484 TTLL11Q8NHH1 800 aa25.49■■□□□ 1.67
SYNC-201ENST00000373484 C7orf43Q8WVR3 580 aa25.48■■□□□ 1.67
SYNC-201ENST00000373484 SPEF2Q9C093 1822 aa25.48■■□□□ 1.67
SYNC-201ENST00000373484 C21orf2O43822 256 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 GRAPQ13588 217 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 GRAPLQ8TC17 118 aaPredicted RBP25.47■■□□□ 1.67
SYNC-201ENST00000373484 DAXXQ9UER7 740 aaPredicted RBP25.47■■□□□ 1.67
SYNC-201ENST00000373484 SBF1O95248 1867 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 LRRC37AA6NMS7 1700 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 RTL9Q8NET4 1388 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 FOXO4P98177 505 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 AAMPQ13685 434 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 C8orf34Q49A92 452 aa25.47■■□□□ 1.67
SYNC-201ENST00000373484 DZIP1LQ8IYY4 767 aaKnown RBP25.47■■□□□ 1.67
SYNC-201ENST00000373484 CCDC88AQ3V6T2 1871 aa25.46■■□□□ 1.67
SYNC-201ENST00000373484 CSF1RP07333 972 aa25.46■■□□□ 1.67
SYNC-201ENST00000373484 FTSJ3Q8IY81 847 aaKnown RBP25.46■■□□□ 1.67
SYNC-201ENST00000373484 SUCLG2Q96I99 432 aa25.46■■□□□ 1.67
SYNC-201ENST00000373484 CCDC85AQ96PX6 553 aaPredicted RBP25.46■■□□□ 1.67
SYNC-201ENST00000373484 ZNF219Q9P2Y4 722 aaPredicted RBP25.46■■□□□ 1.67
SYNC-201ENST00000373484 PPEF1O14829 653 aaPredicted RBP25.45■■□□□ 1.66
SYNC-201ENST00000373484 TMEM57Q8N5G2 664 aa25.45■■□□□ 1.66
SYNC-201ENST00000373484 KAZALD1Q96I82 304 aa25.45■■□□□ 1.66
SYNC-201ENST00000373484 BBOX1O75936 387 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 EPHA10Q5JZY3 1008 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 SOGA3Q5TF21 947 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 CELF1Q92879 486 aaKnown RBP25.44■■□□□ 1.66
SYNC-201ENST00000373484 SEC31BQ9NQW1 1179 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 RLBP1P12271 317 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 PDE3AQ14432 1141 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 GREM2Q9H772 168 aa25.44■■□□□ 1.66
SYNC-201ENST00000373484 ARHGAP27Q6ZUM4 889 aa25.43■■□□□ 1.66
SYNC-201ENST00000373484 SNED1Q8TER0 1413 aa25.42■■□□□ 1.66
SYNC-201ENST00000373484 OLFM4Q6UX06 510 aa25.42■■□□□ 1.66
SYNC-201ENST00000373484 MEIS3Q99687 375 aa25.42■■□□□ 1.66
SYNC-201ENST00000373484 UBTFL1P0CB47 393 aaPredicted RBP25.41■■□□□ 1.66
SYNC-201ENST00000373484 GSE1Q14687 1217 aa25.41■■□□□ 1.66
SYNC-201ENST00000373484 CCDC93Q567U6 631 aa25.41■■□□□ 1.66
SYNC-201ENST00000373484 LMBR1LQ6UX01 489 aa25.41■■□□□ 1.66
SYNC-201ENST00000373484 TMC4Q7Z404 712 aa25.41■■□□□ 1.66
SYNC-201ENST00000373484 ATP6V0A2Q9Y487 856 aa25.41■■□□□ 1.66
SYNC-201ENST00000373484 RPS8P62241 208 aaKnown RBP25.4■■□□□ 1.66
SYNC-201ENST00000373484 NFKBIBQ15653 356 aa25.4■■□□□ 1.66
SYNC-201ENST00000373484 CC2D2BQ6DHV5 1058 aa25.4■■□□□ 1.66
SYNC-201ENST00000373484 BICC1Q9H694 974 aaKnown RBP25.4■■□□□ 1.66
SYNC-201ENST00000373484 RABL6Q3YEC7 729 aaPredicted RBP25.4■■□□□ 1.66
SYNC-201ENST00000373484 SLC51AQ86UW1 340 aa25.4■■□□□ 1.66
SYNC-201ENST00000373484 PANK1Q8TE04 598 aa25.4■■□□□ 1.66
SYNC-201ENST00000373484 CDC5LQ99459 802 aaKnown RBP25.4■■□□□ 1.66
SYNC-201ENST00000373484 DICER1Q9UPY3 1922 aaKnown RBP25.39■■□□□ 1.66
SYNC-201ENST00000373484 NFKBIEO00221 500 aa25.39■■□□□ 1.65
SYNC-201ENST00000373484 ITGA6P23229 1130 aa25.39■■□□□ 1.65
SYNC-201ENST00000373484 SP8Q8IXZ3 490 aa25.39■■□□□ 1.65
SYNC-201ENST00000373484 GNAI3P08754 354 aa25.38■■□□□ 1.65
SYNC-201ENST00000373484 ANKRD44Q8N8A2 993 aa25.38■■□□□ 1.65
SYNC-201ENST00000373484 LTBP1Q14766 1721 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 ANKRD18AQ8IVF6 992 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms