RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 AKR1B10O60218 316 aa17.39■□□□□ 0.38
GTF3C4-201ENST00000372146 PANK2Q9BZ23 570 aa17.39■□□□□ 0.38
GTF3C4-201ENST00000372146 N4BP3O15049 544 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 CCDC172P0C7W6 258 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 PSME1Q06323 249 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 SDCCAG8Q86SQ7 713 aaPredicted RBP17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 TXNDC16Q9P2K2 825 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 HGSO14964 777 aaPredicted RBP17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 ATP5DP30049 168 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 RGS22Q8NE09 1264 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 SPATS2LQ9NUQ6 558 aaKnown RBP17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 GOLGA6CA6NDK9 693 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 SMIM24O75264 130 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 GOLGA6DP0CG33 693 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 GOLGA6AQ9NYA3 693 aa17.39■□□□□ 0.37
GTF3C4-201ENST00000372146 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 ATP6V1AP38606 617 aa17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 ERCC6LQ2NKX8 1250 aa17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 SYCP3Q8IZU3 236 aa17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 ATP2A2P16615 1042 aaKnown RBP17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 SH3BGRP55822 239 aaPredicted RBP17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 PRPHP41219 470 aa17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 NKIRAS1Q9NYS0 192 aa17.38■□□□□ 0.37
GTF3C4-201ENST00000372146 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 PPP1R7Q15435 360 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 GEN1Q17RS7 908 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 TRIM35Q9UPQ4 493 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 STX6O43752 255 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 BAG4O95429 457 aaKnown RBP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 GJB2P29033 226 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 TLDC2A0PJX2 215 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 GOLGA8AA7E2F4 631 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 AMPD3Q01432 767 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 STK38LQ9Y2H1 464 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 SNX16P57768 344 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 SSRP1Q08945 709 aaKnown RBP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 ARFGAP2Q8N6H7 521 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 RLBP1P12271 317 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 RABEP2Q9H5N1 569 aa17.37■□□□□ 0.37
GTF3C4-201ENST00000372146 EXOC1Q9NV70 894 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 LZTFL1Q9NQ48 299 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 CALML4Q96GE6 196 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 CRCPO75575 148 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 TACO1Q9BSH4 297 aaKnown RBP17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 ZNF354CQ86Y25 554 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 AIDAQ96BJ3 306 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 FAF1Q9UNN5 650 aaPredicted RBP17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 KRT86O43790 486 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 KANK3Q6NY19 840 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
GTF3C4-201ENST00000372146 A0A087WZG4 1122 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 GUCA1BQ9UMX6 200 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 UAP1Q16222 522 aaPredicted RBP17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 TSGA10Q9BZW7 698 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 MRFAP1Q9Y605 127 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 PPP2R3AQ06190 1150 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 CHMP2AO43633 222 aa17.35■□□□□ 0.37
GTF3C4-201ENST00000372146 ARID5AQ03989 594 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 MTRF1LQ9UGC7 380 aaKnown RBP17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 CCDC14Q49A88 953 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 CERS3Q8IU89 383 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 BICD1Q96G01 975 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 CCDC186Q7Z3E2 898 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 STRN4Q9NRL3 753 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 GJC1P36383 396 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
GTF3C4-201ENST00000372146 RAB3IPQ96QF0 476 aaPredicted RBP17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 SPAG5Q96R06 1193 aa17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 SPECC1L-ADORA2AF8WAN1 911 aa17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 CCDC82Q8N4S0 544 aa17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 LRP2BPQ9P2M1 347 aa17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 TFIP11Q9UBB9 837 aaKnown RBP17.33■□□□□ 0.37
GTF3C4-201ENST00000372146 RSPH3Q86UC2 560 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 ARHGAP24Q8N264 748 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms