RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GSTA5Q7RTV2 222 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 PUF60Q9UHX1 559 aaKnown RBP17.35■□□□□ 0.37
COL5A1-201ENST00000371817 GLRX3O76003 335 aaKnown RBP17.35■□□□□ 0.37
COL5A1-201ENST00000371817 ATP2A2P16615 1042 aaKnown RBP17.35■□□□□ 0.37
COL5A1-201ENST00000371817 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 LMBR1Q8WVP7 490 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 A0A087WZG4 1122 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 USP5P45974 858 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 EVCP57679 992 aa17.35■□□□□ 0.37
COL5A1-201ENST00000371817 MYRIPQ8NFW9 859 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 CALML4Q96GE6 196 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 TERF1P54274 439 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
COL5A1-201ENST00000371817 TMCO4Q5TGY1 634 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 RASSF2P50749 326 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 ZSCAN26Q16670 478 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
COL5A1-201ENST00000371817 HDGFL1Q5TGJ6 251 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 ZNF287Q9HBT7 754 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 TCP11L1Q9NUJ3 509 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 MTUS1Q9ULD2 1270 aa17.34■□□□□ 0.37
COL5A1-201ENST00000371817 BRD2P25440 801 aaKnown RBP17.33■□□□□ 0.37
COL5A1-201ENST00000371817 SYKP43405 635 aa17.33■□□□□ 0.37
COL5A1-201ENST00000371817 SSRP1Q08945 709 aaKnown RBP17.33■□□□□ 0.37
COL5A1-201ENST00000371817 ZC4H2Q9NQZ6 224 aa17.33■□□□□ 0.37
COL5A1-201ENST00000371817 PTGS1P23219 599 aa17.33■□□□□ 0.37
COL5A1-201ENST00000371817 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.37
COL5A1-201ENST00000371817 STRN4Q9NRL3 753 aa17.33■□□□□ 0.37
COL5A1-201ENST00000371817 SLC8A1P32418 973 aa17.33■□□□□ 0.36
COL5A1-201ENST00000371817 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
COL5A1-201ENST00000371817 MUM1Q2TAK8 710 aa17.33■□□□□ 0.36
COL5A1-201ENST00000371817 TRIM47Q96LD4 638 aa17.33■□□□□ 0.36
COL5A1-201ENST00000371817 PSME1Q06323 249 aa17.33■□□□□ 0.36
COL5A1-201ENST00000371817 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
COL5A1-201ENST00000371817 SATB1Q01826 763 aa17.33■□□□□ 0.36
COL5A1-201ENST00000371817 ZNF622Q969S3 477 aaKnown RBP eCLIP17.33■□□□□ 0.36
COL5A1-201ENST00000371817 RPAP2Q8IXW5 612 aaPredicted RBP17.33■□□□□ 0.36
COL5A1-201ENST00000371817 RUFY3Q7L099 469 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 SDCCAG8Q86SQ7 713 aaPredicted RBP17.32■□□□□ 0.36
COL5A1-201ENST00000371817 NDC80O14777 642 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 RAB3IPQ96QF0 476 aaPredicted RBP17.32■□□□□ 0.36
COL5A1-201ENST00000371817 TXNDC16Q9P2K2 825 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 SYT10Q6XYQ8 523 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 RAB11FIP4Q86YS3 637 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
COL5A1-201ENST00000371817 VPS52Q8N1B4 723 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
COL5A1-201ENST00000371817 ZBTB9Q96C00 473 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 KIF1BPQ96EK5 621 aa17.32■□□□□ 0.36
COL5A1-201ENST00000371817 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
COL5A1-201ENST00000371817 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 TNNC1P63316 161 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL5A1-201ENST00000371817 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 STXBP4Q6ZWJ1 553 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 IRX4P78413 519 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 CCDC25Q86WR0 208 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 EXOC1Q9NV70 894 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 TLDC2A0PJX2 215 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 HMGB1P1B2RPK0 211 aaPredicted RBP17.31■□□□□ 0.36
COL5A1-201ENST00000371817 VCX3AQ9NNX9 186 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 TXNDC9O14530 226 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 ZNF569Q5MCW4 686 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 SPAG5Q96R06 1193 aa17.31■□□□□ 0.36
COL5A1-201ENST00000371817 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 ZNF131P52739 623 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 KIAA1524Q8TCG1 905 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 LZTFL1Q9NQ48 299 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 SPAG1Q07617 926 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 TUBB2AQ13885 445 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 TUBB2BQ9BVA1 445 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 ZSCAN22P10073 491 aaPredicted RBP17.3■□□□□ 0.36
COL5A1-201ENST00000371817 FLIIQ13045 1269 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 TAOK1Q7L7X3 1001 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 GUCA1BQ9UMX6 200 aa17.3■□□□□ 0.36
COL5A1-201ENST00000371817 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 CABS1Q96KC9 395 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 XAB2Q9HCS7 855 aaKnown RBP17.29■□□□□ 0.36
COL5A1-201ENST00000371817 CCDC14Q49A88 953 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 BAIAP2L1Q9UHR4 511 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 KCNG4Q8TDN1 519 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 MPHOSPH8Q99549 860 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 TRPC3Q13507 836 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
COL5A1-201ENST00000371817 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 OPHN1O60890 802 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 TYRO3Q06418 890 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 CCDC26Q8TAB7 109 aa17.28■□□□□ 0.36
COL5A1-201ENST00000371817 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms