RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 NUP62CLQ9H1M0 184 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 TEX35Q5T0J7 233 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 FKBP15Q5T1M5 1219 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 CAVIN1Q6NZI2 390 aaKnown RBP11.41□□□□□ -0.58
SCAF11-202ENST00000369367 SNRKQ9NRH2 765 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 ZNF790Q6PG37 636 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 MAGEB6P1A0A0J9YX57 407 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 EIF5P55010 431 aaKnown RBP11.4□□□□□ -0.58
SCAF11-202ENST00000369367 PLEKHG1Q9ULL1 1385 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
SCAF11-202ENST00000369367 ATP8B2P98198 1209 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 IQCEQ6IPM2 695 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 DDX11Q96FC9 970 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 SLC4A4Q9Y6R1 1079 aa11.4□□□□□ -0.58
SCAF11-202ENST00000369367 CTAGE5O15320 804 aa11.4□□□□□ -0.59
SCAF11-202ENST00000369367 METAP2P50579 478 aaKnown RBP eCLIP11.4□□□□□ -0.59
SCAF11-202ENST00000369367 KANK3Q6NY19 840 aa11.4□□□□□ -0.59
SCAF11-202ENST00000369367 TTC41PQ6P2S7 1318 aa11.4□□□□□ -0.59
SCAF11-202ENST00000369367 NCBP1Q09161 790 aaKnown RBP11.39□□□□□ -0.59
SCAF11-202ENST00000369367 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 NPC1L1Q9UHC9 1359 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 EFCAB6Q5THR3 1501 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 TRAK2O60296 914 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 SETQ01105 290 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-202ENST00000369367 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 SAMD9Q5K651 1589 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
SCAF11-202ENST00000369367 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
SCAF11-202ENST00000369367 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.39□□□□□ -0.59
SCAF11-202ENST00000369367 PLXNC1O60486 1568 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
SCAF11-202ENST00000369367 SAMM50Q9Y512 469 aa11.39□□□□□ -0.59
SCAF11-202ENST00000369367 PDE8AO60658 829 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 ANXA1P04083 346 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-202ENST00000369367 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 ZRSR2Q15696 482 aaKnown RBP11.38□□□□□ -0.59
SCAF11-202ENST00000369367 PICK1Q9NRD5 415 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 KIF4AO95239 1232 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 JAKMIP3Q5VZ66 844 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 WDR66Q8TBY9 1149 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 RXRBP28702 533 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 UBA7P41226 1012 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 SEPT11Q9NVA2 429 aaKnown RBP11.38□□□□□ -0.59
SCAF11-202ENST00000369367 KDM5DQ9BY66 1539 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 F8W031 263 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-202ENST00000369367 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 SLC52A2Q9HAB3 445 aa11.38□□□□□ -0.59
SCAF11-202ENST00000369367 SLC9C2Q5TAH2 1124 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 CCDC181Q5TID7 509 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 CCDC83Q8IWF9 413 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 TBC1D22AQ8WUA7 517 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 NAP1L4Q99733 375 aaKnown RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 TMEM94Q12767 1356 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 CALML3P27482 149 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 BACH2Q9BYV9 841 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 APBB1IPQ7Z5R6 666 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 VTI1AQ96AJ9 217 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 GTPBP4Q9BZE4 634 aaKnown RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 IBSPP21815 317 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 HDAC1Q13547 482 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 DPP8Q6V1X1 898 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 NIM1KQ8IY84 436 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
SCAF11-202ENST00000369367 PRIM1P49642 420 aaKnown RBP11.37□□□□□ -0.59
SCAF11-202ENST00000369367 C6orf50Q9HD87 102 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 ZBTB43O43298 467 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 MAP3K11Q16584 847 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 VAT1LQ9HCJ6 419 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 UFL1O94874 794 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 GRM1Q13255 1194 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 PICALMQ13492 652 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 PAG1Q9NWQ8 432 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 TBCAO75347 108 aaKnown RBP11.36□□□□□ -0.59
SCAF11-202ENST00000369367 ANO10Q9NW15 660 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 NLGN1Q8N2Q7 840 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
SCAF11-202ENST00000369367 GLT8D2Q9H1C3 349 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
SCAF11-202ENST00000369367 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
SCAF11-202ENST00000369367 ADGBQ8N7X0 1667 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
SCAF11-202ENST00000369367 TAF4BQ92750 862 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-202ENST00000369367 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 PARD3Q8TEW0 1356 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms