RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CEP135Q66GS9 1140 aa20.57■□□□□ 0.88
CHTOP-203ENST00000368690 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
CHTOP-203ENST00000368690 CREBRFQ8IUR6 639 aa20.57■□□□□ 0.88
CHTOP-203ENST00000368690 ZNF397Q8NF99 534 aaPredicted RBP20.57■□□□□ 0.88
CHTOP-203ENST00000368690 KCND1Q9NSA2 647 aa20.57■□□□□ 0.88
CHTOP-203ENST00000368690 FAM53CQ9NYF3 392 aa20.57■□□□□ 0.88
CHTOP-203ENST00000368690 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
CHTOP-203ENST00000368690 KRT222Q8N1A0 295 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 SNRKQ9NRH2 765 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 CLIP2Q9UDT6 1046 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 NRBP1Q9UHY1 535 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 ERBB3P21860 1342 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 SRGAP3O43295 1099 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 ZNF165P49910 485 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 CAMK4Q16566 473 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 CDC37L1Q7L3B6 337 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 CACTINQ8WUQ7 758 aaKnown RBP20.56■□□□□ 0.88
CHTOP-203ENST00000368690 SPATA32Q96LK8 384 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 NLRP2Q9NX02 1062 aa20.56■□□□□ 0.88
CHTOP-203ENST00000368690 MRFAP1L1Q96HT8 127 aa20.55■□□□□ 0.88
CHTOP-203ENST00000368690 TPCN1Q9ULQ1 816 aa20.55■□□□□ 0.88
CHTOP-203ENST00000368690 HIP1O00291 1037 aa20.55■□□□□ 0.88
CHTOP-203ENST00000368690 LEO1Q8WVC0 666 aaPredicted RBP20.55■□□□□ 0.88
CHTOP-203ENST00000368690 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
CHTOP-203ENST00000368690 NYAP1Q6ZVC0 841 aa20.54■□□□□ 0.88
CHTOP-203ENST00000368690 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
CHTOP-203ENST00000368690 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
CHTOP-203ENST00000368690 GPATCH3Q96I76 525 aa20.54■□□□□ 0.88
CHTOP-203ENST00000368690 TOM1O60784 492 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 MTX1Q13505 466 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 TERF2Q15554 542 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 LRRC8AQ8IWT6 810 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 CREB3L3Q68CJ9 461 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 MAP4K1Q92918 833 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 CHMP4AQ9BY43 222 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
CHTOP-203ENST00000368690 CCDC66A2RUB6 948 aa20.52■□□□□ 0.88
CHTOP-203ENST00000368690 RNF20Q5VTR2 975 aa20.52■□□□□ 0.88
CHTOP-203ENST00000368690 NECAB1Q8N987 351 aa20.52■□□□□ 0.88
CHTOP-203ENST00000368690 ERO1AQ96HE7 468 aa20.52■□□□□ 0.88
CHTOP-203ENST00000368690 A0A0U1RQG5 324 aaPredicted RBP20.52■□□□□ 0.88
CHTOP-203ENST00000368690 KIF2AO00139 706 aaPredicted RBP20.52■□□□□ 0.88
CHTOP-203ENST00000368690 TAF7Q15545 349 aaPredicted RBP20.52■□□□□ 0.88
CHTOP-203ENST00000368690 CLASRPQ8N2M8 674 aaKnown RBP20.52■□□□□ 0.88
CHTOP-203ENST00000368690 CPDO75976 1380 aa20.51■□□□□ 0.87
CHTOP-203ENST00000368690 RBM8AQ9Y5S9 174 aaKnown RBP20.51■□□□□ 0.87
CHTOP-203ENST00000368690 CTAGE5O15320 804 aa20.51■□□□□ 0.87
CHTOP-203ENST00000368690 CCDC144BQ3MJ40 725 aa20.51■□□□□ 0.87
CHTOP-203ENST00000368690 ERC1Q8IUD2 1116 aa20.51■□□□□ 0.87
CHTOP-203ENST00000368690 CCDC144CPQ8IYA2 1237 aa20.51■□□□□ 0.87
CHTOP-203ENST00000368690 IQCB1Q15051 598 aa20.5■□□□□ 0.87
CHTOP-203ENST00000368690 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
CHTOP-203ENST00000368690 UBAP1LF5GYI3 381 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 FGD1P98174 961 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 FERMT3Q86UX7 667 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 DNAJC25Q9H1X3 360 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 IGSF3O75054 1194 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 NR1I2O75469 434 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 HOXB7P09629 217 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 TSGA10IPQ3SY00 556 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 KMT5BQ4FZB7 885 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 COL18A1P39060 1754 aa20.49■□□□□ 0.87
CHTOP-203ENST00000368690 GOLGA6L19H0YKK7 550 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 BEND3Q5T5X7 828 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 NECTIN2Q92692 538 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 PGBD1Q96JS3 809 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 ABCA3Q99758 1704 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 SLC27A2O14975 620 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 RPS6KB1P23443 525 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 NAA30Q147X3 362 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-203ENST00000368690 BLOC1S2Q6QNY1 142 aa20.48■□□□□ 0.87
CHTOP-203ENST00000368690 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-203ENST00000368690 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-203ENST00000368690 FAM173BQ6P4H8 233 aa20.47■□□□□ 0.87
CHTOP-203ENST00000368690 LARP1Q6PKG0 1096 aaKnown RBP20.47■□□□□ 0.87
CHTOP-203ENST00000368690 BICD2Q8TD16 824 aa20.47■□□□□ 0.87
CHTOP-203ENST00000368690 RAPGEF4Q8WZA2 1011 aa20.47■□□□□ 0.87
CHTOP-203ENST00000368690 ZSCAN16Q9H4T2 348 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-203ENST00000368690 HMG20BQ9P0W2 317 aa20.47■□□□□ 0.87
CHTOP-203ENST00000368690 AHDC1Q5TGY3 1603 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-203ENST00000368690 JCADQ9P266 1359 aa20.47■□□□□ 0.87
CHTOP-203ENST00000368690 STX1AQ16623 288 aa20.46■□□□□ 0.87
CHTOP-203ENST00000368690 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-203ENST00000368690 IL17REQ8NFR9 667 aa20.46■□□□□ 0.87
CHTOP-203ENST00000368690 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
CHTOP-203ENST00000368690 PHAXQ9H814 394 aaKnown RBP20.46■□□□□ 0.87
CHTOP-203ENST00000368690 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
CHTOP-203ENST00000368690 CFAP45Q9UL16 551 aa20.46■□□□□ 0.87
CHTOP-203ENST00000368690 ZNF215Q9UL58 517 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-203ENST00000368690 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
CHTOP-203ENST00000368690 TFIP11Q9UBB9 837 aaKnown RBP20.46■□□□□ 0.87
CHTOP-203ENST00000368690 SKILP12757 684 aa20.45■□□□□ 0.86
CHTOP-203ENST00000368690 OS9Q13438 667 aaPredicted RBP20.45■□□□□ 0.86
CHTOP-203ENST00000368690 TOM1L2Q6ZVM7 507 aa20.45■□□□□ 0.86
CHTOP-203ENST00000368690 SLU7O95391 586 aaKnown RBP20.45■□□□□ 0.86
CHTOP-203ENST00000368690 TUBB4AP04350 444 aa20.45■□□□□ 0.86
CHTOP-203ENST00000368690 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms