RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CDHR2Q9BYE9 1310 aa22.02■■□□□ 1.12
PDLIM7-203ENST00000359895 BAG4O95429 457 aaKnown RBP22.02■■□□□ 1.12
PDLIM7-203ENST00000359895 DDB1Q16531 1140 aa22.02■■□□□ 1.12
PDLIM7-203ENST00000359895 MAP4K1Q92918 833 aa22.02■■□□□ 1.12
PDLIM7-203ENST00000359895 TTC14Q96N46 770 aa22.02■■□□□ 1.12
PDLIM7-203ENST00000359895 ZNF609O15014 1411 aa22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 ZKSCAN1P17029 563 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 NECTIN1Q15223 517 aa22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 CCDC57Q2TAC2 916 aa22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 RASEFQ8IZ41 740 aa22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 FAM227BQ96M60 508 aa22.01■■□□□ 1.11
PDLIM7-203ENST00000359895 SLC4A9Q96Q91 983 aa22■■□□□ 1.11
PDLIM7-203ENST00000359895 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 PRIM1P49642 420 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 L1TD1Q5T7N2 865 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 RNF20Q5VTR2 975 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 RBM8AQ9Y5S9 174 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 A0A0D9SFI3 127 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 KCNJ4P48050 445 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 PRPF40BQ6NWY9 871 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 RREB1Q92766 1687 aa21.99■■□□□ 1.11
PDLIM7-203ENST00000359895 CSF1RP07333 972 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 VPS53Q5VIR6 699 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 BARGINQ6ZT62 677 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 ARXQ96QS3 562 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 CEP126Q9P2H0 1117 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 LIMCH1Q9UPQ0 1083 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 SLIT2O94813 1529 aa21.98■■□□□ 1.11
PDLIM7-203ENST00000359895 PALLDQ8WX93 1383 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 CASTP20810 708 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 PSMA5P28066 241 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 CREB3L3Q68CJ9 461 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 NLRP10Q86W26 655 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 NGLY1Q96IV0 654 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 NEUROD6Q96NK8 337 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 ZSWIM6Q9HCJ5 1215 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 ZBTB1Q9Y2K1 713 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 CYP46A1Q9Y6A2 500 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 AFF2P51816 1311 aa21.97■■□□□ 1.11
PDLIM7-203ENST00000359895 AK2P54819 239 aa21.96■■□□□ 1.11
PDLIM7-203ENST00000359895 LRRC24Q50LG9 513 aa21.96■■□□□ 1.11
PDLIM7-203ENST00000359895 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-203ENST00000359895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.96■■□□□ 1.11
PDLIM7-203ENST00000359895 JAKMIP1Q96N16 626 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-203ENST00000359895 DNAJC2Q99543 621 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-203ENST00000359895 IFIT5Q13325 482 aaKnown RBP21.95■■□□□ 1.11
PDLIM7-203ENST00000359895 KBTBD3Q8NAB2 608 aa21.95■■□□□ 1.11
PDLIM7-203ENST00000359895 FAM89AQ96GI7 184 aa21.95■■□□□ 1.11
PDLIM7-203ENST00000359895 ZNF594Q96JF6 807 aaPredicted RBP21.95■■□□□ 1.11
PDLIM7-203ENST00000359895 ZSCAN31Q96LW9 406 aaPredicted RBP21.95■■□□□ 1.11
PDLIM7-203ENST00000359895 HLFQ16534 295 aa21.95■■□□□ 1.1
PDLIM7-203ENST00000359895 TAF7LQ5H9L4 462 aa21.95■■□□□ 1.1
PDLIM7-203ENST00000359895 PDRG1Q9NUG6 133 aa21.95■■□□□ 1.1
PDLIM7-203ENST00000359895 ZDHHC9Q9Y397 364 aa21.95■■□□□ 1.1
PDLIM7-203ENST00000359895 SLC27A2O14975 620 aa21.94■■□□□ 1.1
PDLIM7-203ENST00000359895 PKP1Q13835 747 aa21.94■■□□□ 1.1
PDLIM7-203ENST00000359895 RUFY3Q7L099 469 aa21.94■■□□□ 1.1
PDLIM7-203ENST00000359895 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-203ENST00000359895 EDC3Q96F86 508 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-203ENST00000359895 ISY1Q9ULR0 285 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-203ENST00000359895 RPAP1Q9BWH6 1393 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 ZNF831Q5JPB2 1677 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 A0A1B0GUL7 405 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 BRD1O95696 1058 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 TIMM10P62072 90 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 TSGA10IPQ3SY00 556 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 SH2B1Q9NRF2 756 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 PAG1Q9NWQ8 432 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 SH3TC1Q8TE82 1336 aa21.93■■□□□ 1.1
PDLIM7-203ENST00000359895 TAF5LO75529 589 aa21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 MCMDC2Q4G0Z9 681 aa21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 USPL1Q5W0Q7 1092 aa21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 MCTP1Q6DN14 999 aa21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 POTEAQ6S8J7 498 aa21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 GZF1Q9H116 711 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 BCL9LQ86UU0 1499 aa21.92■■□□□ 1.1
PDLIM7-203ENST00000359895 GOLGA6L3A6NEY3 463 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 GPTP24298 496 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 KRT32Q14532 448 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 ADCK5Q3MIX3 580 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 MARCH10Q8NA82 808 aaPredicted RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 ALDH8A1Q9H2A2 487 aaPredicted RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 HELLSQ9NRZ9 838 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 CCDC87Q9NVE4 849 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 U3KPZ7 1027 aaPredicted RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 IFIT1P09914 478 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 KLHL40Q2TBA0 621 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 LRRFIP1Q32MZ4 808 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 DDX46Q7L014 1031 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 ZNF589Q86UQ0 364 aaPredicted RBP21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 AK7Q96M32 723 aa21.91■■□□□ 1.1
PDLIM7-203ENST00000359895 FSD2A1L4K1 749 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms