RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 WWC3Q9ULE0 1092 aa30.61■■■□□ 2.49
ALKAL1-201ENST00000358543 PELP1Q8IZL8 1130 aaKnown RBP30.6■■■□□ 2.49
ALKAL1-201ENST00000358543 TMEM57Q8N5G2 664 aa30.6■■■□□ 2.49
ALKAL1-201ENST00000358543 TTLL11Q8NHH1 800 aa30.6■■■□□ 2.49
ALKAL1-201ENST00000358543 GRIN3BO60391 1043 aa30.59■■■□□ 2.49
ALKAL1-201ENST00000358543 CSF1RP07333 972 aa30.59■■■□□ 2.49
ALKAL1-201ENST00000358543 PRPF40BQ6NWY9 871 aaKnown RBP30.59■■■□□ 2.49
ALKAL1-201ENST00000358543 GOLGB1Q14789 3259 aaKnown RBP30.59■■■□□ 2.49
ALKAL1-201ENST00000358543 FOXO4P98177 505 aa30.58■■■□□ 2.49
ALKAL1-201ENST00000358543 MYH3P11055 1940 aa30.57■■■□□ 2.48
ALKAL1-201ENST00000358543 BBOX1O75936 387 aa30.57■■■□□ 2.48
ALKAL1-201ENST00000358543 RLBP1P12271 317 aa30.57■■■□□ 2.48
ALKAL1-201ENST00000358543 ARFGEF1Q9Y6D6 1849 aa30.57■■■□□ 2.48
ALKAL1-201ENST00000358543 RTL9Q8NET4 1388 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 PLIN1O60240 522 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 GRAPQ13588 217 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 GRAPLQ8TC17 118 aaPredicted RBP30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 C7orf43Q8WVR3 580 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 KAZALD1Q96I82 304 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 SUCLG2Q96I99 432 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 HDAC5Q9UQL6 1122 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 SLX4Q8IY92 1834 aa30.56■■■□□ 2.48
ALKAL1-201ENST00000358543 UBTFL1P0CB47 393 aaPredicted RBP30.54■■■□□ 2.48
ALKAL1-201ENST00000358543 PDE3AQ14432 1141 aa30.54■■■□□ 2.48
ALKAL1-201ENST00000358543 EPHA10Q5JZY3 1008 aa30.54■■■□□ 2.48
ALKAL1-201ENST00000358543 GNAI3P08754 354 aa30.53■■■□□ 2.48
ALKAL1-201ENST00000358543 SOGA3Q5TF21 947 aa30.53■■■□□ 2.48
ALKAL1-201ENST00000358543 PANK1Q8TE04 598 aa30.53■■■□□ 2.48
ALKAL1-201ENST00000358543 TMC4Q7Z404 712 aa30.52■■■□□ 2.48
ALKAL1-201ENST00000358543 CCDC85AQ96PX6 553 aaPredicted RBP30.52■■■□□ 2.48
ALKAL1-201ENST00000358543 MEIS3Q99687 375 aa30.52■■■□□ 2.48
ALKAL1-201ENST00000358543 GREM2Q9H772 168 aa30.52■■■□□ 2.48
ALKAL1-201ENST00000358543 SEC31BQ9NQW1 1179 aa30.52■■■□□ 2.48
ALKAL1-201ENST00000358543 UTRNP46939 3433 aa30.51■■■□□ 2.48
ALKAL1-201ENST00000358543 PPEF1O14829 653 aaPredicted RBP30.51■■■□□ 2.47
ALKAL1-201ENST00000358543 C21orf2O43822 256 aa30.51■■■□□ 2.47
ALKAL1-201ENST00000358543 RABL6Q3YEC7 729 aaPredicted RBP30.51■■■□□ 2.47
ALKAL1-201ENST00000358543 LMBR1LQ6UX01 489 aa30.51■■■□□ 2.47
ALKAL1-201ENST00000358543 ITPRIPQ8IWB1 547 aa30.51■■■□□ 2.47
ALKAL1-201ENST00000358543 CELF1Q92879 486 aaKnown RBP30.51■■■□□ 2.47
ALKAL1-201ENST00000358543 RPS8P62241 208 aaKnown RBP30.5■■■□□ 2.47
ALKAL1-201ENST00000358543 CC2D2BQ6DHV5 1058 aa30.5■■■□□ 2.47
ALKAL1-201ENST00000358543 CDC5LQ99459 802 aaKnown RBP30.5■■■□□ 2.47
ALKAL1-201ENST00000358543 BICC1Q9H694 974 aaKnown RBP30.5■■■□□ 2.47
ALKAL1-201ENST00000358543 CACNA1SQ13698 1873 aa30.49■■■□□ 2.47
ALKAL1-201ENST00000358543 ATP6V0A2Q9Y487 856 aa30.49■■■□□ 2.47
ALKAL1-201ENST00000358543 ZBTB7BO15156 539 aaPredicted RBP30.48■■■□□ 2.47
ALKAL1-201ENST00000358543 ITGA6P23229 1130 aa30.48■■■□□ 2.47
ALKAL1-201ENST00000358543 RRP1P56182 461 aaKnown RBP30.48■■■□□ 2.47
ALKAL1-201ENST00000358543 FAM161AQ3B820 660 aa30.48■■■□□ 2.47
ALKAL1-201ENST00000358543 GRIPAP1Q4V328 841 aa30.48■■■□□ 2.47
ALKAL1-201ENST00000358543 SP8Q8IXZ3 490 aa30.48■■■□□ 2.47
ALKAL1-201ENST00000358543 ANKRD44Q8N8A2 993 aa30.47■■■□□ 2.47
ALKAL1-201ENST00000358543 ZNF219Q9P2Y4 722 aaPredicted RBP30.47■■■□□ 2.47
ALKAL1-201ENST00000358543 TAF1P21675 1872 aa30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 ANKRD18BA2A2Z9 1011 aa30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 IFIT5Q13325 482 aaKnown RBP30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 MVPQ14764 893 aaKnown RBP30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 CCDC93Q567U6 631 aa30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 ARHGAP27Q6ZUM4 889 aa30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 ANKRD18AQ8IVF6 992 aa30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 TMX4Q9H1E5 349 aaPredicted RBP30.46■■■□□ 2.47
ALKAL1-201ENST00000358543 LRRFIP2Q9Y608 721 aaKnown RBP30.45■■■□□ 2.47
ALKAL1-201ENST00000358543 GNAI2P04899 355 aa30.44■■■□□ 2.46
ALKAL1-201ENST00000358543 CCDC57Q2TAC2 916 aa30.44■■■□□ 2.46
ALKAL1-201ENST00000358543 RTKN2Q8IZC4 609 aa30.44■■■□□ 2.46
ALKAL1-201ENST00000358543 DDX19BQ9UMR2 479 aa30.44■■■□□ 2.46
ALKAL1-201ENST00000358543 CHMP3Q9Y3E7 222 aa30.44■■■□□ 2.46
ALKAL1-201ENST00000358543 C20orf194Q5TEA3 1177 aa30.43■■■□□ 2.46
ALKAL1-201ENST00000358543 BSDC1Q9NW68 430 aaPredicted RBP30.43■■■□□ 2.46
ALKAL1-201ENST00000358543 COG6Q9Y2V7 657 aa30.43■■■□□ 2.46
ALKAL1-201ENST00000358543 IGHMBP2P38935 993 aaKnown RBP30.42■■■□□ 2.46
ALKAL1-201ENST00000358543 OLFM4Q6UX06 510 aa30.42■■■□□ 2.46
ALKAL1-201ENST00000358543 CHMP4BQ9H444 224 aaKnown RBP30.42■■■□□ 2.46
ALKAL1-201ENST00000358543 COL4A1P02462 1669 aa30.42■■■□□ 2.46
ALKAL1-201ENST00000358543 SNED1Q8TER0 1413 aa30.41■■■□□ 2.46
ALKAL1-201ENST00000358543 LTBP3Q9NS15 1303 aa30.4■■■□□ 2.46
ALKAL1-201ENST00000358543 FER1L6Q2WGJ9 1857 aa30.4■■■□□ 2.46
ALKAL1-201ENST00000358543 NFKBIEO00221 500 aa30.39■■■□□ 2.46
ALKAL1-201ENST00000358543 MTX1Q13505 466 aa30.38■■■□□ 2.45
ALKAL1-201ENST00000358543 PSMD1Q99460 953 aa30.38■■■□□ 2.45
ALKAL1-201ENST00000358543 MPHOSPH8Q99549 860 aa30.38■■■□□ 2.45
ALKAL1-201ENST00000358543 TAOK3Q9H2K8 898 aa30.37■■■□□ 2.45
ALKAL1-201ENST00000358543 LRRC37AA6NMS7 1700 aa30.36■■■□□ 2.45
ALKAL1-201ENST00000358543 FKBP4Q02790 459 aaKnown RBP eCLIP30.36■■■□□ 2.45
ALKAL1-201ENST00000358543 SLC51AQ86UW1 340 aa30.36■■■□□ 2.45
ALKAL1-201ENST00000358543 TAF7LQ5H9L4 462 aa30.35■■■□□ 2.45
ALKAL1-201ENST00000358543 MPNDQ8N594 471 aa30.35■■■□□ 2.45
ALKAL1-201ENST00000358543 ZBTB40Q9NUA8 1239 aa30.35■■■□□ 2.45
ALKAL1-201ENST00000358543 RFX5P48382 616 aaPredicted RBP30.34■■■□□ 2.45
ALKAL1-201ENST00000358543 ZNF594Q96JF6 807 aaPredicted RBP30.34■■■□□ 2.45
ALKAL1-201ENST00000358543 RTFDC1Q9BY42 306 aaPredicted RBP30.34■■■□□ 2.45
ALKAL1-201ENST00000358543 PODXL2Q9NZ53 605 aa30.34■■■□□ 2.45
ALKAL1-201ENST00000358543 MINPP1Q9UNW1 487 aa30.34■■■□□ 2.45
ALKAL1-201ENST00000358543 SUPT16HQ9Y5B9 1047 aaKnown RBP30.34■■■□□ 2.45
ALKAL1-201ENST00000358543 DPP8Q6V1X1 898 aaPredicted RBP30.33■■■□□ 2.45
ALKAL1-201ENST00000358543 LDHAL6AQ6ZMR3 332 aa30.33■■■□□ 2.45
ALKAL1-201ENST00000358543 GPSM2P81274 684 aa30.32■■■□□ 2.44
ALKAL1-201ENST00000358543 RASSF7Q02833 373 aa30.32■■■□□ 2.44
ALKAL1-201ENST00000358543 NSFL1CQ9UNZ2 370 aaKnown RBP30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms