RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 MCMDC2Q4G0Z9 681 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 GNAQP50148 359 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 CAMK4Q16566 473 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 IFIT1BQ5T764 474 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 TAF4BQ92750 862 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 ZC3H12CQ9C0D7 883 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 VAT1LQ9HCJ6 419 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 SEPT7Q16181 437 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 GJB2P29033 226 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 TRAPPC3LQ5T215 181 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 CETN1Q12798 172 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 SPA17Q15506 151 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 MAP3K19Q56UN5 1328 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 TTC41PQ6P2S7 1318 aa11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
SPTAN1-201ENST00000358161 PZPP20742 1482 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 ZRSR2Q15696 482 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 ERLIN1O75477 346 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 NEFHP12036 1026 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 CACNA2D4Q7Z3S7 1137 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 TESK2Q96S53 571 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 NF2P35240 595 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 TSPOAP1O95153 1857 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 MAGEB6P1A0A0J9YX57 407 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 SYCE3A1L190 88 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 IBSPP21815 317 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 ARHGAP29Q52LW3 1261 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 BMP15O95972 392 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 MAP7D2Q96T17 732 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 PAG1Q9NWQ8 432 aa11.93□□□□□ -0.5
SPTAN1-201ENST00000358161 STX6O43752 255 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 CCDC112Q8NEF3 446 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 ZBTB43O43298 467 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 SSR1P43307 286 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 FILIP1Q7Z7B0 1213 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 PDE1AP54750 535 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 ERMNQ8TAM6 284 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 SLC9C2Q5TAH2 1124 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 FSIP1Q8NA03 581 aa11.92□□□□□ -0.5
SPTAN1-201ENST00000358161 GNPATO15228 680 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 UBA7P41226 1012 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 TSHZ3Q63HK5 1081 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 SAMM50Q9Y512 469 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 FAM177A1Q8N128 213 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 AXDND1Q5T1B0 1012 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 SDSP20132 328 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 ANAPC15P60006 121 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 RTN1Q16799 776 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 SKIDA1Q1XH10 827 aa11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 SFPQP23246 707 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
SPTAN1-201ENST00000358161 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 CWC15Q9P013 229 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 B4DLN1 442 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 MRPL12P52815 198 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 KLF18A0A0U1RQI7 1052 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 ZSCAN12O43309 604 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 CALM1P0DP23 149 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 CALM2P0DP24 149 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 CALM3P0DP25 149 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 DDX21Q9NR30 783 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 KIF2AO00139 706 aaPredicted RBP11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 RTL9Q8NET4 1388 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 RBM25P49756 843 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 PICALMQ13492 652 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
SPTAN1-201ENST00000358161 IGHDP01880 384 aa11.9□□□□□ -0.51
SPTAN1-201ENST00000358161 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.51
SPTAN1-201ENST00000358161 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.51
SPTAN1-201ENST00000358161 KIF1BO60333 1816 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 VAMP4O75379 141 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 HOXB7P09629 217 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 GBP2P32456 591 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 TMEM2Q9UHN6 1383 aa11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-201ENST00000358161 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms