RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CCDC7Q96M83 1385 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 EEA1Q15075 1411 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 E7EVH7 732 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 MAFGO15525 162 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 PDCP20941 246 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 ATP6V1AP38606 617 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-203ENST00000357654 TWISTNBQ3B726 338 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-203ENST00000357654 ZNF569Q5MCW4 686 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 TMTC4Q5T4D3 741 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 ARHGAP27Q6ZUM4 889 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 ANKRD1Q15327 319 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 TMEM259Q4ZIN3 620 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 WDR63Q8IWG1 891 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 RYBPQ8N488 228 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-203ENST00000357654 SMCR8Q8TEV9 937 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-203ENST00000357654 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-203ENST00000357654 SLC7A5P2Q9GIP4 190 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 BOLA2Q9H3K6 86 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 SLC8A3P57103 927 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 SETDB2Q96T68 719 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 ITKQ08881 620 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 HS1BP3Q53T59 392 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 CCDC129Q6ZRS4 1044 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 SEPT8Q92599 483 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 PAGR1Q9BTK6 254 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 MED10Q9BTT4 135 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 AKAP2Q9Y2D5 859 aa6.62□□□□□ -1.35
BRCA1-203ENST00000357654 CARMIL1Q5VZK9 1371 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 CCT2P78371 535 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 KIAA0753Q2KHM9 967 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 IPO4Q8TEX9 1081 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 CDK19Q9BWU1 502 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 STK32BQ9NY57 414 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 KIF15Q9NS87 1388 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 MYBBP1AQ9BQG0 1328 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 DDX39AO00148 427 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 CCDC192P0DO97 292 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 MAEAQ7L5Y9 396 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 OLA1Q9NTK5 396 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 FEZ2Q9UHY8 353 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 NOB1Q9ULX3 412 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 UIMC1Q96RL1 719 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 AGTPBP1Q9UPW5 1226 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 EIF6P56537 245 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 PLCB4Q15147 1175 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 KIF4BQ2VIQ3 1234 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 TBC1D31Q96DN5 1066 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 JADE2Q9NQC1 790 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 CHMP2AO43633 222 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 MYCLP12524 364 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 NUCB1Q02818 461 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 PDCL2Q8N4E4 241 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 LARP6Q9BRS8 491 aaKnown RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
BRCA1-203ENST00000357654 CWC25Q9NXE8 425 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-203ENST00000357654 CCDC66A2RUB6 948 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 USO1O60763 962 aaKnown RBP6.6□□□□□ -1.35
BRCA1-203ENST00000357654 SESTD1Q86VW0 696 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 TCP11L1Q9NUJ3 509 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 ZNF213O14771 459 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 HAND2P61296 217 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 PDE4BQ07343 736 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 NSMCE1Q8WV22 266 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 PRDM5Q9NQX1 630 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-203ENST00000357654 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 GIPC1O14908 333 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 PAFAH1B1P43034 410 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 TSR2Q969E8 191 aaKnown RBP6.6□□□□□ -1.35
BRCA1-203ENST00000357654 LMCD1Q9NZU5 365 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 BCS1LQ9Y276 419 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 KRT19P08727 400 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 FERMT3Q86UX7 667 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.6□□□□□ -1.35
BRCA1-203ENST00000357654 FRMD4BQ9Y2L6 1034 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 SYNDIG1LA6NDD5 238 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 CCT6AP40227 531 aaKnown RBP6.6□□□□□ -1.35
BRCA1-203ENST00000357654 SARNPP82979 210 aaKnown RBP6.6□□□□□ -1.35
BRCA1-203ENST00000357654 KRT33BQ14525 404 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 Q3C1V9 767 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 AEBP1Q8IUX7 1158 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 GPATCH11Q8N954 259 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 WHAMMQ8TF30 809 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 ZBED2Q9BTP6 218 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 EXOC1Q9NV70 894 aa6.6□□□□□ -1.35
BRCA1-203ENST00000357654 SLC4A1P02730 911 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 KRT85P78386 507 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 N4BP2L2Q92802 583 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 NAP1L4Q99733 375 aaKnown RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SELENOSQ9BQE4 189 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 RIOK1Q9BRS2 568 aaKnown RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 CCDC8Q9H0W5 538 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 RNF216Q9NWF9 866 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SUFUQ9UMX1 484 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 TOM1O60784 492 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 HSPA1LP34931 641 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 TNNI2P48788 182 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms