RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 OTUD6BQ8N6M0 293 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 LARSQ9P2J5 1176 aaKnown RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 IRX4P78413 519 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 RNF168Q8IYW5 571 aaPredicted RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 GSTTP1A0A1W2PQM5 241 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 PSMA7O14818 248 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MSH5O43196 834 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 SLC4A2P04920 1241 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 EXOSC9Q06265 439 aaKnown RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 CACNA2D3Q8IZS8 1091 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 SRGAP3O43295 1099 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 GNAQP50148 359 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 ERMNQ8TAM6 284 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MTRF1LQ9UGC7 380 aaKnown RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 ATP2A2P16615 1042 aaKnown RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MTMR3Q13615 1198 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 FEZ2Q9UHY8 353 aaPredicted RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 KAT6AQ92794 2004 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 NT5C2P49902 561 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 CCDC40Q4G0X9 1142 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 SPECC1Q5M775 1068 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MRPS27Q92552 414 aaKnown RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 GLT8D2Q9H1C3 349 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MAP4K4O95819 1239 aaPredicted RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MYO7AQ13402 2215 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 REREQ9P2R6 1566 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 VWA3BQ502W6 1294 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 LARP1Q6PKG0 1096 aaKnown RBP7.49□□□□□ -1.21
VPS13B-202ENST00000357162 CSRNP2Q9H175 543 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 MAP3K21Q5TCX8 1036 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 LAMC3Q9Y6N6 1575 aa7.49□□□□□ -1.21
VPS13B-202ENST00000357162 KIAA0100Q14667 2235 aaKnown RBP7.48□□□□□ -1.21
VPS13B-202ENST00000357162 ARHGAP6O43182 974 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 PPFIA4O75335 1185 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 FAM160A1Q05DH4 1040 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TMED8Q6PL24 325 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-202ENST00000357162 SPTBN1Q01082 2364 aaKnown RBP7.48□□□□□ -1.21
VPS13B-202ENST00000357162 GCC2Q8IWJ2 1684 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TRIM27P14373 513 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 FERP16591 822 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 GOLGA5Q8TBA6 731 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TCP11L1Q9NUJ3 509 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 CALML3P27482 149 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 ADGBQ8N7X0 1667 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 ERCC3P19447 782 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 ERCC6LQ2NKX8 1250 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 CCDC129Q6ZRS4 1044 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 KIF5AQ12840 1032 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TAOK2Q9UL54 1235 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 RPAINQ86UA6 219 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TAX1BP1Q86VP1 789 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 GPR161Q8N6U8 529 aaKnown RBP7.48□□□□□ -1.21
VPS13B-202ENST00000357162 PHLDB2Q86SQ0 1253 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TRIM7Q9C029 511 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 ARHGAP31Q2M1Z3 1444 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 EHMT1Q9H9B1 1298 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 TOPBP1Q92547 1522 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 ATP6V1AP38606 617 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 KIF6Q6ZMV9 814 aa7.48□□□□□ -1.21
VPS13B-202ENST00000357162 PPFIBP2Q8ND30 876 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 CDCA7LQ96GN5 454 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 NOL3O60936 208 aaKnown RBP7.47□□□□□ -1.21
VPS13B-202ENST00000357162 MAP2K2P36507 400 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 NLRP5P59047 1200 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 ATP11AP98196 1134 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 NBPF8Q3BBV2 869 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 SYT1P21579 422 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 USP5P45974 858 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 MAP7Q14244 749 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 KIAA0753Q2KHM9 967 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 SSH1Q8WYL5 1049 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 CCDC61Q9Y6R9 512 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 NSD3Q9BZ95 1437 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 RUBCNQ92622 972 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 SETD1BQ9UPS6 1966 aaKnown RBP7.47□□□□□ -1.21
VPS13B-202ENST00000357162 SLFNL1Q499Z3 407 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 WHAMMP3Q1A5X7 153 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 FSIP1Q8NA03 581 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 AKR1B10O60218 316 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 SYKP43405 635 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 GBP7Q8N8V2 638 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-202ENST00000357162 KCNH5Q8NCM2 988 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 ACTN4O43707 911 aaKnown RBP7.47□□□□□ -1.21
VPS13B-202ENST00000357162 TYRO3Q06418 890 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 CNNM3Q8NE01 707 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 EFCC1Q9HA90 598 aa7.47□□□□□ -1.21
VPS13B-202ENST00000357162 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
VPS13B-202ENST00000357162 ALDH1L1O75891 902 aa7.46□□□□□ -1.21
VPS13B-202ENST00000357162 ZFYVE27Q5T4F4 411 aa7.46□□□□□ -1.21
VPS13B-202ENST00000357162 TMEM57Q8N5G2 664 aa7.46□□□□□ -1.21
VPS13B-202ENST00000357162 AFAP1L1Q8TED9 768 aa7.46□□□□□ -1.21
VPS13B-202ENST00000357162 TRIM37O94972 964 aa7.46□□□□□ -1.21
VPS13B-202ENST00000357162 CCDC84Q86UT8 332 aaPredicted RBP7.46□□□□□ -1.21
VPS13B-202ENST00000357162 UBASH3AP57075 661 aa7.46□□□□□ -1.21
VPS13B-202ENST00000357162 DBF4Q9UBU7 674 aaPredicted RBP7.46□□□□□ -1.21
VPS13B-202ENST00000357162 CABIN1Q9Y6J0 2220 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms