RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 EIF4G1Q04637 1599 aaKnown RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 COL9A3Q14050 684 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 KBTBD4Q9NVX7 518 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 CDV3Q9UKY7 258 aaKnown RBP2.42□□□□□ -2.02
BRCA1-202ENST00000354071 AK5Q9Y6K8 562 aa2.42□□□□□ -2.02
BRCA1-202ENST00000354071 ARAP1Q96P48 1450 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 TLDC2A0PJX2 215 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 BACH1O14867 736 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 SDE2Q6IQ49 451 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 GMLQ99445 158 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 SERTM1A2A2V5 107 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ETFBP38117 255 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 PHKA2P46019 1235 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 RELBQ01201 579 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ATP2B2Q01814 1243 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 MYO19Q96H55 970 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ESYT1Q9BSJ8 1104 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 POLR3GLQ9BT43 218 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ZNF408Q9H9D4 720 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 MEN1O00255 615 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 EFSO43281 561 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 TNFRSF21O75509 655 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 USP17L7P0C7H9 530 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ATF4P18848 351 aaPredicted RBP2.41□□□□□ -2.02
BRCA1-202ENST00000354071 BRD2P25440 801 aaKnown RBP2.41□□□□□ -2.02
BRCA1-202ENST00000354071 GGCXP38435 758 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ARID5AQ03989 594 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 FOXC1Q12948 553 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 KANK3Q6NY19 840 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ESF1Q9H501 851 aaKnown RBP2.41□□□□□ -2.02
BRCA1-202ENST00000354071 METTL5Q9NRN9 209 aaKnown RBP2.41□□□□□ -2.02
BRCA1-202ENST00000354071 KLF15Q9UIH9 416 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 ABCC9O60706 1549 aa2.41□□□□□ -2.02
BRCA1-202ENST00000354071 FAM221BA6H8Z2 402 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 TRPA1O75762 1119 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 CENPCQ03188 943 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 MAP3K11Q16584 847 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 ADAMTSL4Q6UY14 1074 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 PPARGC1BQ86YN6 1023 aaKnown RBP2.4□□□□□ -2.02
BRCA1-202ENST00000354071 CCDC74AQ96AQ1 378 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 TLR6Q9Y2C9 796 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 MINDY4BA8MYZ0 360 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 GNRH1P01148 92 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 ACPPP15309 386 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 MAP3K10Q02779 954 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 RBL2Q08999 1139 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 GRIN2CQ14957 1233 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 CCDC81Q6ZN84 652 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 MICAL1Q8TDZ2 1067 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 OSBPL2Q9H1P3 480 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 ADAMTS1Q9UHI8 967 aa2.4□□□□□ -2.02
BRCA1-202ENST00000354071 EREGO14944 169 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 MARCH6O60337 910 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 ITGB2P05107 769 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 GPC1P35052 558 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 PLA2G4AP47712 749 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 FAM160A1Q05DH4 1040 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 C1orf229Q6ZS94 237 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-202ENST00000354071 SLC43A3Q8NBI5 491 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 CITED4Q96RK1 184 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 CNTN3Q9P232 1028 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 KANSL3Q9P2N6 904 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 CYP2E1P05181 493 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-202ENST00000354071 CRKP46108 304 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 C11orf91Q3C1V1 193 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 RNFT1Q5M7Z0 435 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 ALG1LQ6GMV1 187 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 ZNF746Q6NUN9 644 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-202ENST00000354071 HS2ST1Q7LGA3 356 aa2.4□□□□□ -2.03
BRCA1-202ENST00000354071 HNRNPLLQ8WVV9 542 aaKnown RBP2.4□□□□□ -2.03
BRCA1-202ENST00000354071 TMA7Q9Y2S6 64 aaKnown RBP2.4□□□□□ -2.03
BRCA1-202ENST00000354071 SYNJ2O15056 1496 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 H3BM21 787 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 EIF5BO60841 1220 aaKnown RBP2.39□□□□□ -2.03
BRCA1-202ENST00000354071 EIF4BP23588 611 aaKnown RBP2.39□□□□□ -2.03
BRCA1-202ENST00000354071 GJA8P48165 433 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 RTN1Q16799 776 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 ALKBH2Q6NS38 261 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 CYP2U1Q7Z449 544 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 ANKRD13AQ8IZ07 590 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 ABTB2Q8N961 1025 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 AIDAQ96BJ3 306 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 PLD4Q96BZ4 506 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 CHRDQ9H2X0 955 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 C12orf49Q9H741 205 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 ERMP1Q7Z2K6 904 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 CELF2-AS1Q8N7Q2 184 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 FAM169BQ8N8A8 192 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 C1orf127Q8N9H9 656 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 BCO2Q9BYV7 579 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 UBP1Q9NZI7 540 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 SOBPA7XYQ1 873 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 K7ELQ4 463 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-202ENST00000354071 CDK2AP1O14519 115 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 C2CD2LO14523 706 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 MICAL2O94851 1124 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 NASPP49321 788 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-202ENST00000354071 NOP9Q86U38 636 aaKnown RBP2.39□□□□□ -2.03
BRCA1-202ENST00000354071 ZNF654Q8IZM8 581 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms