RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 SEC31AO94979 1220 aaKnown RBP16.43■□□□□ 0.22
DNMT3B-204ENST00000353855 HAND2P61296 217 aa16.43■□□□□ 0.22
DNMT3B-204ENST00000353855 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
DNMT3B-204ENST00000353855 ORC3Q9UBD5 711 aaPredicted RBP16.43■□□□□ 0.22
DNMT3B-204ENST00000353855 FAM227BQ96M60 508 aa16.43■□□□□ 0.22
DNMT3B-204ENST00000353855 RABEP2Q9H5N1 569 aa16.43■□□□□ 0.22
DNMT3B-204ENST00000353855 IRX5P78411 483 aaPredicted RBP16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 SYKP43405 635 aa16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 KCNF1Q9H3M0 494 aa16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 RGS12O14924 1447 aa16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 XPO4Q9C0E2 1151 aaKnown RBP16.42■□□□□ 0.22
DNMT3B-204ENST00000353855 GOLGA6L9A6NEM1 432 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 RNF187Q5TA31 235 aaPredicted RBP16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 LARGE1O95461 756 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 PTH1RQ03431 593 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 KIAA1328Q86T90 577 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 CCDC148Q8NFR7 591 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 KDM5DQ9BY66 1539 aa16.41■□□□□ 0.22
DNMT3B-204ENST00000353855 ERICH2A1L162 156 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 FAM107BQ9H098 131 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 ABCA8O94911 1581 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 FAM160A1Q05DH4 1040 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 TPCN1Q9ULQ1 816 aa16.4■□□□□ 0.22
DNMT3B-204ENST00000353855 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 HMG20BQ9P0W2 317 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 NCOA3Q9Y6Q9 1424 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 ERVK-7P63135 1459 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 DNAJC21Q5F1R6 531 aaKnown RBP16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 ZNHIT6Q9NWK9 470 aaKnown RBP16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 CTAGE15A4D2H0 777 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 CTAGE8P0CG41 777 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 DNA2P51530 1060 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 MAP9Q49MG5 647 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 CTAGE6Q86UF2 777 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 CTAGE4Q8IX94 777 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
DNMT3B-204ENST00000353855 CLCN6P51797 869 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 USP27XA6NNY8 438 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 WASLO00401 505 aaPredicted RBP16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 SPTLC2O15270 562 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 AK9Q5TCS8 1911 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 GOLIM4O00461 696 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 SLC27A2O14975 620 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 IL13P35225 146 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 PTPN21Q16825 1174 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 RIMS2Q9UQ26 1411 aa16.38■□□□□ 0.21
DNMT3B-204ENST00000353855 PRDM15P57071 1507 aaPredicted RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 GYS2P54840 703 aa16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 FANCCQ00597 558 aa16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 ZNF569Q5MCW4 686 aa16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 CCDC102BQ68D86 513 aa16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 TUBB4AP04350 444 aa16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 C11orf57Q6ZUT1 292 aaPredicted RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 ETF1P62495 437 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 TDRD7Q8NHU6 1098 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 CHL1O00533 1208 aa16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 BAG1Q99933 345 aaPredicted RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 ZCCHC17Q9NP64 241 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-204ENST00000353855 CCDC144BQ3MJ40 725 aa16.36■□□□□ 0.21
DNMT3B-204ENST00000353855 PLCD4Q9BRC7 762 aa16.36■□□□□ 0.21
DNMT3B-204ENST00000353855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.36■□□□□ 0.21
DNMT3B-204ENST00000353855 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
DNMT3B-204ENST00000353855 ODF2Q5BJF6 829 aa16.36■□□□□ 0.21
DNMT3B-204ENST00000353855 KCNG4Q8TDN1 519 aa16.36■□□□□ 0.21
DNMT3B-204ENST00000353855 PIK3R4Q99570 1358 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms