RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 NBPF7P0C2Y1 421 aaPredicted RBP17.57■□□□□ 0.4
SEC13-202ENST00000350697 MS4A1P11836 297 aa17.57■□□□□ 0.4
SEC13-202ENST00000350697 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
SEC13-202ENST00000350697 PRPF40BQ6NWY9 871 aaKnown RBP17.57■□□□□ 0.4
SEC13-202ENST00000350697 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
SEC13-202ENST00000350697 USP44Q9H0E7 712 aa17.57■□□□□ 0.4
SEC13-202ENST00000350697 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
SEC13-202ENST00000350697 SLX4Q8IY92 1834 aa17.57■□□□□ 0.4
SEC13-202ENST00000350697 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
SEC13-202ENST00000350697 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.56■□□□□ 0.4
SEC13-202ENST00000350697 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
SEC13-202ENST00000350697 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
SEC13-202ENST00000350697 PLIN1O60240 522 aa17.54■□□□□ 0.4
SEC13-202ENST00000350697 CSF1RP07333 972 aa17.54■□□□□ 0.4
SEC13-202ENST00000350697 RLBP1P12271 317 aa17.54■□□□□ 0.4
SEC13-202ENST00000350697 FOXO4P98177 505 aa17.54■□□□□ 0.4
SEC13-202ENST00000350697 GRAPQ13588 217 aa17.54■□□□□ 0.4
SEC13-202ENST00000350697 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
SEC13-202ENST00000350697 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
SEC13-202ENST00000350697 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
SEC13-202ENST00000350697 BBOX1O75936 387 aa17.53■□□□□ 0.4
SEC13-202ENST00000350697 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
SEC13-202ENST00000350697 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
SEC13-202ENST00000350697 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
SEC13-202ENST00000350697 CCDC85AQ96PX6 553 aaPredicted RBP17.53■□□□□ 0.4
SEC13-202ENST00000350697 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
SEC13-202ENST00000350697 TAF1P21675 1872 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
SEC13-202ENST00000350697 C21orf2O43822 256 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 ITPRIPQ8IWB1 547 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 MEIS3Q99687 375 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 GREM2Q9H772 168 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
SEC13-202ENST00000350697 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
SEC13-202ENST00000350697 GNAI3P08754 354 aa17.51■□□□□ 0.39
SEC13-202ENST00000350697 LMBR1LQ6UX01 489 aa17.51■□□□□ 0.39
SEC13-202ENST00000350697 TMC4Q7Z404 712 aa17.51■□□□□ 0.39
SEC13-202ENST00000350697 CELF1Q92879 486 aaKnown RBP17.51■□□□□ 0.39
SEC13-202ENST00000350697 CDC5LQ99459 802 aaKnown RBP17.51■□□□□ 0.39
SEC13-202ENST00000350697 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
SEC13-202ENST00000350697 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
SEC13-202ENST00000350697 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
SEC13-202ENST00000350697 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
SEC13-202ENST00000350697 ARHGAP27Q6ZUM4 889 aa17.5■□□□□ 0.39
SEC13-202ENST00000350697 BICC1Q9H694 974 aaKnown RBP17.5■□□□□ 0.39
SEC13-202ENST00000350697 ITGA6P23229 1130 aa17.49■□□□□ 0.39
SEC13-202ENST00000350697 RABL6Q3YEC7 729 aaPredicted RBP17.49■□□□□ 0.39
SEC13-202ENST00000350697 CCDC93Q567U6 631 aa17.49■□□□□ 0.39
SEC13-202ENST00000350697 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
SEC13-202ENST00000350697 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
SEC13-202ENST00000350697 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
SEC13-202ENST00000350697 UTRNP46939 3433 aa17.49■□□□□ 0.39
SEC13-202ENST00000350697 ANKRD18BA2A2Z9 1011 aa17.48■□□□□ 0.39
SEC13-202ENST00000350697 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
SEC13-202ENST00000350697 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
SEC13-202ENST00000350697 GRIPAP1Q4V328 841 aa17.48■□□□□ 0.39
SEC13-202ENST00000350697 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
SEC13-202ENST00000350697 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
SEC13-202ENST00000350697 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
SEC13-202ENST00000350697 COL4A1P02462 1669 aa17.48■□□□□ 0.39
SEC13-202ENST00000350697 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
SEC13-202ENST00000350697 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
SEC13-202ENST00000350697 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
SEC13-202ENST00000350697 LRRFIP2Q9Y608 721 aaKnown RBP17.47■□□□□ 0.39
SEC13-202ENST00000350697 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
SEC13-202ENST00000350697 CCDC57Q2TAC2 916 aa17.47■□□□□ 0.39
SEC13-202ENST00000350697 ZBTB7BO15156 539 aaPredicted RBP17.46■□□□□ 0.39
SEC13-202ENST00000350697 GNAI2P04899 355 aa17.46■□□□□ 0.39
SEC13-202ENST00000350697 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
SEC13-202ENST00000350697 C20orf194Q5TEA3 1177 aa17.46■□□□□ 0.39
SEC13-202ENST00000350697 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
SEC13-202ENST00000350697 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
SEC13-202ENST00000350697 COG6Q9Y2V7 657 aa17.46■□□□□ 0.39
SEC13-202ENST00000350697 LRRC37AA6NMS7 1700 aa17.45■□□□□ 0.38
SEC13-202ENST00000350697 NFKBIEO00221 500 aa17.45■□□□□ 0.38
SEC13-202ENST00000350697 MPHOSPH8Q99549 860 aa17.45■□□□□ 0.38
SEC13-202ENST00000350697 TAOK3Q9H2K8 898 aa17.45■□□□□ 0.38
SEC13-202ENST00000350697 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
SEC13-202ENST00000350697 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
SEC13-202ENST00000350697 CHD4Q14839 1912 aa17.44■□□□□ 0.38
SEC13-202ENST00000350697 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
SEC13-202ENST00000350697 SLC51AQ86UW1 340 aa17.44■□□□□ 0.38
SEC13-202ENST00000350697 CHMP4BQ9H444 224 aaKnown RBP17.44■□□□□ 0.38
SEC13-202ENST00000350697 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
SEC13-202ENST00000350697 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
SEC13-202ENST00000350697 RASSF7Q02833 373 aa17.43■□□□□ 0.38
SEC13-202ENST00000350697 MPNDQ8N594 471 aa17.43■□□□□ 0.38
SEC13-202ENST00000350697 PSMD1Q99460 953 aa17.43■□□□□ 0.38
SEC13-202ENST00000350697 YY1P25490 414 aa17.42■□□□□ 0.38
SEC13-202ENST00000350697 MTX1Q13505 466 aa17.42■□□□□ 0.38
SEC13-202ENST00000350697 DPP8Q6V1X1 898 aaPredicted RBP17.42■□□□□ 0.38
SEC13-202ENST00000350697 ZNF594Q96JF6 807 aaPredicted RBP17.42■□□□□ 0.38
SEC13-202ENST00000350697 SBF1O95248 1867 aa17.41■□□□□ 0.38
SEC13-202ENST00000350697 NSFL1CQ9UNZ2 370 aaKnown RBP17.41■□□□□ 0.38
SEC13-202ENST00000350697 LMNB1P20700 586 aa17.4■□□□□ 0.38
SEC13-202ENST00000350697 GPSM2P81274 684 aa17.4■□□□□ 0.38
SEC13-202ENST00000350697 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms