RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CACNA1FO60840 1977 aa25.69■■□□□ 1.7
CEACAM3-201ENST00000344550 SCN4AP35499 1836 aa25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 PI4KAP2A4QPH2 592 aa25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 VAMP4O75379 141 aa25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 EIF6P56537 245 aaKnown RBP25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 DPP8Q6V1X1 898 aaPredicted RBP25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 LARGE2Q8N3Y3 721 aa25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 MPNDQ8N594 471 aa25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 PI4KAP1Q8N8J0 262 aa25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 DDX60Q8IY21 1712 aaKnown RBP25.68■■□□□ 1.7
CEACAM3-201ENST00000344550 CDHR2Q9BYE9 1310 aa25.66■■□□□ 1.7
CEACAM3-201ENST00000344550 SALL2Q9Y467 1007 aaPredicted RBP25.66■■□□□ 1.7
CEACAM3-201ENST00000344550 ZNF541Q9H0D2 1346 aa25.65■■□□□ 1.7
CEACAM3-201ENST00000344550 TCERG1O14776 1098 aaKnown RBP25.65■■□□□ 1.7
CEACAM3-201ENST00000344550 PDE8AO60658 829 aa25.65■■□□□ 1.7
CEACAM3-201ENST00000344550 NIM1KQ8IY84 436 aa25.65■■□□□ 1.7
CEACAM3-201ENST00000344550 PPIP5K2O43314 1243 aa25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 EXOSC9Q06265 439 aaKnown RBP25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 FLIIQ13045 1269 aa25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 CCDC152Q4G0S7 254 aa25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 PNMA8AQ86V59 439 aaPredicted RBP25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 TAF1DQ9H5J8 278 aaPredicted RBP25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 HACL1Q9UJ83 578 aa25.64■■□□□ 1.7
CEACAM3-201ENST00000344550 ZNF521Q96K83 1311 aa25.63■■□□□ 1.69
CEACAM3-201ENST00000344550 RPS8P62241 208 aaKnown RBP25.63■■□□□ 1.69
CEACAM3-201ENST00000344550 KIAA2012Q0VF49 1180 aa25.63■■□□□ 1.69
CEACAM3-201ENST00000344550 IGKV5-2P06315 115 aa25.62■■□□□ 1.69
CEACAM3-201ENST00000344550 RTL5Q5HYW3 569 aaPredicted RBP25.62■■□□□ 1.69
CEACAM3-201ENST00000344550 CHADLQ6NUI6 762 aa25.62■■□□□ 1.69
CEACAM3-201ENST00000344550 LDHDQ86WU2 507 aa25.62■■□□□ 1.69
CEACAM3-201ENST00000344550 ZNRF3Q9ULT6 936 aa25.62■■□□□ 1.69
CEACAM3-201ENST00000344550 LRRC37AA6NMS7 1700 aa25.61■■□□□ 1.69
CEACAM3-201ENST00000344550 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
CEACAM3-201ENST00000344550 CELF1Q92879 486 aaKnown RBP25.61■■□□□ 1.69
CEACAM3-201ENST00000344550 NEURL1BA8MQ27 555 aa25.6■■□□□ 1.69
CEACAM3-201ENST00000344550 G2E3Q7L622 706 aa25.6■■□□□ 1.69
CEACAM3-201ENST00000344550 FKBP5Q13451 457 aaPredicted RBP25.59■■□□□ 1.69
CEACAM3-201ENST00000344550 AOC3Q16853 763 aa25.59■■□□□ 1.69
CEACAM3-201ENST00000344550 DNAJC5GQ8N7S2 189 aa25.59■■□□□ 1.69
CEACAM3-201ENST00000344550 LINS1Q8NG48 757 aa25.59■■□□□ 1.69
CEACAM3-201ENST00000344550 DNAAF4Q8WXU2 420 aa25.59■■□□□ 1.69
CEACAM3-201ENST00000344550 SPINK5Q9NQ38 1064 aaPredicted RBP25.59■■□□□ 1.69
CEACAM3-201ENST00000344550 COL4A5P29400 1685 aa25.58■■□□□ 1.69
CEACAM3-201ENST00000344550 EPHX2P34913 555 aa25.58■■□□□ 1.69
CEACAM3-201ENST00000344550 PODXL2Q9NZ53 605 aa25.58■■□□□ 1.69
CEACAM3-201ENST00000344550 RTL9Q8NET4 1388 aa25.57■■□□□ 1.68
CEACAM3-201ENST00000344550 H7C1W4 665 aa25.57■■□□□ 1.68
CEACAM3-201ENST00000344550 LMOD1P29536 600 aaPredicted RBP25.57■■□□□ 1.68
CEACAM3-201ENST00000344550 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
CEACAM3-201ENST00000344550 NSFL1CQ9UNZ2 370 aaKnown RBP25.57■■□□□ 1.68
CEACAM3-201ENST00000344550 EYA3Q99504 573 aa25.56■■□□□ 1.68
CEACAM3-201ENST00000344550 PLA2G12BQ9BX93 195 aa25.56■■□□□ 1.68
CEACAM3-201ENST00000344550 E9PSI1 815 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 CTSWP56202 376 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 GCKRQ14397 625 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 TNIP1Q15025 636 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 WASHC4Q2M389 1173 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 SLC51AQ86UW1 340 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 CDC5LQ99459 802 aaKnown RBP25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 GJA3Q9Y6H8 435 aa25.55■■□□□ 1.68
CEACAM3-201ENST00000344550 CWF19L2Q2TBE0 894 aaKnown RBP25.54■■□□□ 1.68
CEACAM3-201ENST00000344550 CXCL9Q07325 125 aa25.53■■□□□ 1.68
CEACAM3-201ENST00000344550 ANKRD18AQ8IVF6 992 aa25.53■■□□□ 1.68
CEACAM3-201ENST00000344550 TTLL11Q8NHH1 800 aa25.53■■□□□ 1.68
CEACAM3-201ENST00000344550 TAF1P21675 1872 aa25.53■■□□□ 1.68
CEACAM3-201ENST00000344550 DUOX1Q9NRD9 1551 aa25.52■■□□□ 1.68
CEACAM3-201ENST00000344550 SCNN1DP51172 638 aa25.52■■□□□ 1.68
CEACAM3-201ENST00000344550 USP50Q70EL3 339 aaPredicted RBP25.52■■□□□ 1.68
CEACAM3-201ENST00000344550 SEC31BQ9NQW1 1179 aa25.52■■□□□ 1.68
CEACAM3-201ENST00000344550 GPSM2P81274 684 aa25.51■■□□□ 1.67
CEACAM3-201ENST00000344550 CIAPIN1Q6FI81 312 aa25.51■■□□□ 1.67
CEACAM3-201ENST00000344550 UBE3BQ7Z3V4 1068 aa25.51■■□□□ 1.67
CEACAM3-201ENST00000344550 KLRG1Q96E93 195 aa25.51■■□□□ 1.67
CEACAM3-201ENST00000344550 C6orf229H3BNL8 230 aa25.5■■□□□ 1.67
CEACAM3-201ENST00000344550 TBC1D16Q8TBP0 767 aa25.5■■□□□ 1.67
CEACAM3-201ENST00000344550 GPRC5DQ9NZD1 345 aa25.5■■□□□ 1.67
CEACAM3-201ENST00000344550 POLLQ9UGP5 575 aa25.5■■□□□ 1.67
CEACAM3-201ENST00000344550 POTEIP0CG38 1075 aa25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 POTEJP0CG39 1038 aa25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 EAPPQ56P03 285 aaPredicted RBP25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 CREBZFQ9NS37 354 aa25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 BSDC1Q9NW68 430 aaPredicted RBP25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 ADAMTSL1Q8N6G6 1762 aa25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 LTBP1Q14766 1721 aa25.49■■□□□ 1.67
CEACAM3-201ENST00000344550 XDHP47989 1333 aa25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 PASKQ96RG2 1323 aa25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 CASP7P55210 303 aa25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 ZC3H12CQ9C0D7 883 aaKnown RBP25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 ADARB2Q9NS39 739 aaKnown RBP25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 ANKIB1Q9P2G1 1089 aa25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 GGA1Q9UJY5 639 aa25.48■■□□□ 1.67
CEACAM3-201ENST00000344550 ITGBL1O95965 494 aaPredicted RBP25.47■■□□□ 1.67
CEACAM3-201ENST00000344550 CSF1RP07333 972 aa25.47■■□□□ 1.67
CEACAM3-201ENST00000344550 BEND3Q5T5X7 828 aa25.47■■□□□ 1.67
CEACAM3-201ENST00000344550 JMYQ8N9B5 988 aa25.47■■□□□ 1.67
CEACAM3-201ENST00000344550 CLEC11AQ9Y240 323 aa25.47■■□□□ 1.67
CEACAM3-201ENST00000344550 MYH3P11055 1940 aa25.47■■□□□ 1.67
CEACAM3-201ENST00000344550 SLFN5Q08AF3 891 aa25.46■■□□□ 1.67
CEACAM3-201ENST00000344550 DPF2Q92785 391 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms