RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 CCDC9Q9Y3X0 531 aaKnown RBP25.63■■□□□ 1.69
CCDC38-201ENST00000344280 TAF5LO75529 589 aa25.62■■□□□ 1.69
CCDC38-201ENST00000344280 PDLIM2Q96JY6 352 aa25.62■■□□□ 1.69
CCDC38-201ENST00000344280 MTMR6Q9Y217 621 aa25.62■■□□□ 1.69
CCDC38-201ENST00000344280 FOXO4P98177 505 aa25.62■■□□□ 1.69
CCDC38-201ENST00000344280 DNAJC2Q99543 621 aaKnown RBP25.62■■□□□ 1.69
CCDC38-201ENST00000344280 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
CCDC38-201ENST00000344280 CHMP3Q9Y3E7 222 aa25.61■■□□□ 1.69
CCDC38-201ENST00000344280 JCADQ9P266 1359 aa25.61■■□□□ 1.69
CCDC38-201ENST00000344280 LAMB4A4D0S4 1761 aa25.61■■□□□ 1.69
CCDC38-201ENST00000344280 SEC62Q99442 399 aaKnown RBP25.61■■□□□ 1.69
CCDC38-201ENST00000344280 FIBPO43427 364 aa25.6■■□□□ 1.69
CCDC38-201ENST00000344280 CCDC129Q6ZRS4 1044 aa25.6■■□□□ 1.69
CCDC38-201ENST00000344280 PCDH11XQ9BZA7 1347 aa25.6■■□□□ 1.69
CCDC38-201ENST00000344280 PCDH11YQ9BZA8 1340 aa25.6■■□□□ 1.69
CCDC38-201ENST00000344280 H7C1W4 665 aa25.6■■□□□ 1.69
CCDC38-201ENST00000344280 PSMA5P28066 241 aa25.6■■□□□ 1.69
CCDC38-201ENST00000344280 PARP4Q9UKK3 1724 aaKnown RBP25.59■■□□□ 1.69
CCDC38-201ENST00000344280 DNM1Q05193 864 aaKnown RBP25.59■■□□□ 1.69
CCDC38-201ENST00000344280 BLOC1S2Q6QNY1 142 aa25.59■■□□□ 1.69
CCDC38-201ENST00000344280 XIRP1Q702N8 1843 aaKnown RBP25.59■■□□□ 1.69
CCDC38-201ENST00000344280 DDX46Q7L014 1031 aaKnown RBP25.58■■□□□ 1.69
CCDC38-201ENST00000344280 SYAP1Q96A49 352 aaPredicted RBP25.58■■□□□ 1.69
CCDC38-201ENST00000344280 ZNF609O15014 1411 aa25.58■■□□□ 1.69
CCDC38-201ENST00000344280 RPS6KB1P23443 525 aa25.58■■□□□ 1.69
CCDC38-201ENST00000344280 TOB2Q14106 344 aaPredicted RBP25.58■■□□□ 1.69
CCDC38-201ENST00000344280 RNF20Q5VTR2 975 aa25.58■■□□□ 1.69
CCDC38-201ENST00000344280 TSPY26PQ9H489 355 aa25.58■■□□□ 1.69
CCDC38-201ENST00000344280 ZBTB3Q9H5J0 574 aa25.58■■□□□ 1.69
CCDC38-201ENST00000344280 ATG9AQ7Z3C6 839 aa25.57■■□□□ 1.68
CCDC38-201ENST00000344280 ZSCAN30Q86W11 494 aa25.57■■□□□ 1.68
CCDC38-201ENST00000344280 VPS37CA5D8V6 355 aaPredicted RBP25.57■■□□□ 1.68
CCDC38-201ENST00000344280 SLFNL1Q499Z3 407 aa25.56■■□□□ 1.68
CCDC38-201ENST00000344280 HAUS7Q99871 368 aa25.56■■□□□ 1.68
CCDC38-201ENST00000344280 USPL1Q5W0Q7 1092 aa25.56■■□□□ 1.68
CCDC38-201ENST00000344280 KCPQ6ZWJ8 1503 aa25.56■■□□□ 1.68
CCDC38-201ENST00000344280 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
CCDC38-201ENST00000344280 CWC25Q9NXE8 425 aaPredicted RBP25.55■■□□□ 1.68
CCDC38-201ENST00000344280 ERVV-2B6SEH9 535 aa25.54■■□□□ 1.68
CCDC38-201ENST00000344280 UBE2HP62256 183 aa25.54■■□□□ 1.68
CCDC38-201ENST00000344280 NAP1L5Q96NT1 182 aaPredicted RBP25.54■■□□□ 1.68
CCDC38-201ENST00000344280 TIMM10P62072 90 aa25.54■■□□□ 1.68
CCDC38-201ENST00000344280 TSGA10IPQ3SY00 556 aa25.54■■□□□ 1.68
CCDC38-201ENST00000344280 ZNF594Q96JF6 807 aaPredicted RBP25.54■■□□□ 1.68
CCDC38-201ENST00000344280 ATP6V1DQ9Y5K8 247 aa25.54■■□□□ 1.68
CCDC38-201ENST00000344280 STK3Q13188 491 aa25.53■■□□□ 1.68
CCDC38-201ENST00000344280 NEUROD6Q96NK8 337 aa25.53■■□□□ 1.68
CCDC38-201ENST00000344280 HMG20BQ9P0W2 317 aa25.53■■□□□ 1.68
CCDC38-201ENST00000344280 UBR2Q8IWV8 1755 aa25.53■■□□□ 1.68
CCDC38-201ENST00000344280 LARP1BQ659C4 914 aaKnown RBP25.53■■□□□ 1.68
CCDC38-201ENST00000344280 CDC37L1Q7L3B6 337 aa25.53■■□□□ 1.68
CCDC38-201ENST00000344280 STRN4Q9NRL3 753 aa25.53■■□□□ 1.68
CCDC38-201ENST00000344280 LRRC24Q50LG9 513 aa25.52■■□□□ 1.68
CCDC38-201ENST00000344280 NUP188Q5SRE5 1749 aa25.52■■□□□ 1.68
CCDC38-201ENST00000344280 TJP1Q07157 1748 aa25.52■■□□□ 1.68
CCDC38-201ENST00000344280 IL2RBP14784 551 aa25.52■■□□□ 1.68
CCDC38-201ENST00000344280 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
CCDC38-201ENST00000344280 CCDC183Q5T5S1 534 aa25.52■■□□□ 1.68
CCDC38-201ENST00000344280 FERMT3Q86UX7 667 aa25.52■■□□□ 1.68
CCDC38-201ENST00000344280 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.52■■□□□ 1.68
CCDC38-201ENST00000344280 SOS2Q07890 1332 aaPredicted RBP25.51■■□□□ 1.67
CCDC38-201ENST00000344280 FAM173BQ6P4H8 233 aa25.51■■□□□ 1.67
CCDC38-201ENST00000344280 PHF14O94880 888 aa25.51■■□□□ 1.67
CCDC38-201ENST00000344280 MCMDC2Q4G0Z9 681 aa25.51■■□□□ 1.67
CCDC38-201ENST00000344280 CYP21A2P08686 494 aa25.5■■□□□ 1.67
CCDC38-201ENST00000344280 ANKRD1Q15327 319 aa25.5■■□□□ 1.67
CCDC38-201ENST00000344280 KBTBD3Q8NAB2 608 aa25.5■■□□□ 1.67
CCDC38-201ENST00000344280 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
CCDC38-201ENST00000344280 GOLIM4O00461 696 aa25.49■■□□□ 1.67
CCDC38-201ENST00000344280 SLAIN2Q9P270 581 aa25.49■■□□□ 1.67
CCDC38-201ENST00000344280 CARD10Q9BWT7 1032 aa25.49■■□□□ 1.67
CCDC38-201ENST00000344280 PUS3Q9BZE2 481 aaKnown RBP25.49■■□□□ 1.67
CCDC38-201ENST00000344280 HS1BP3Q53T59 392 aa25.48■■□□□ 1.67
CCDC38-201ENST00000344280 NEK1Q96PY6 1258 aa25.48■■□□□ 1.67
CCDC38-201ENST00000344280 RFX7Q2KHR2 1363 aa25.48■■□□□ 1.67
CCDC38-201ENST00000344280 CCDC191Q8NCU4 936 aa25.48■■□□□ 1.67
CCDC38-201ENST00000344280 MSNP26038 577 aaKnown RBP25.47■■□□□ 1.67
CCDC38-201ENST00000344280 NOL7Q9UMY1 257 aaKnown RBP25.47■■□□□ 1.67
CCDC38-201ENST00000344280 ZNF330Q9Y3S2 320 aaPredicted RBP25.47■■□□□ 1.67
CCDC38-201ENST00000344280 SHANK3Q9BYB0 1731 aa25.47■■□□□ 1.67
CCDC38-201ENST00000344280 PAG1Q9NWQ8 432 aa25.47■■□□□ 1.67
CCDC38-201ENST00000344280 PAPPAQ13219 1627 aa25.46■■□□□ 1.67
CCDC38-201ENST00000344280 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
CCDC38-201ENST00000344280 STOX1Q6ZVD7 989 aa25.46■■□□□ 1.67
CCDC38-201ENST00000344280 LRRC2Q9BYS8 371 aa25.46■■□□□ 1.67
CCDC38-201ENST00000344280 EYA2O00167 538 aa25.46■■□□□ 1.67
CCDC38-201ENST00000344280 U3KPZ7 1027 aaPredicted RBP25.46■■□□□ 1.67
CCDC38-201ENST00000344280 TNS2Q63HR2 1409 aa25.45■■□□□ 1.67
CCDC38-201ENST00000344280 JAK2O60674 1132 aa25.45■■□□□ 1.66
CCDC38-201ENST00000344280 KRT32Q14532 448 aa25.45■■□□□ 1.66
CCDC38-201ENST00000344280 Q6ZUG5 572 aa25.45■■□□□ 1.66
CCDC38-201ENST00000344280 TTC6Q86TZ1 520 aa25.45■■□□□ 1.66
CCDC38-201ENST00000344280 A0A0G2JLW4 131 aa25.44■■□□□ 1.66
CCDC38-201ENST00000344280 GIMAP6Q6P9H5 292 aa25.44■■□□□ 1.66
CCDC38-201ENST00000344280 SH3TC1Q8TE82 1336 aa25.44■■□□□ 1.66
CCDC38-201ENST00000344280 HCLS1P14317 486 aaPredicted RBP25.44■■□□□ 1.66
CCDC38-201ENST00000344280 ZNF335Q9H4Z2 1342 aaPredicted RBP25.43■■□□□ 1.66
CCDC38-201ENST00000344280 A0A1B0GUL7 405 aa25.43■■□□□ 1.66
CCDC38-201ENST00000344280 GPR108Q9NPR9 543 aa25.43■■□□□ 1.66
CCDC38-201ENST00000344280 PALLDQ8WX93 1383 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms