RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 SRGAP3O43295 1099 aa12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 DHX37Q8IY37 1157 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
CAPRIN1-201ENST00000341394 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 DDX11Q96FC9 970 aa12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
CAPRIN1-201ENST00000341394 TPM2P07951 284 aa12.46□□□□□ -0.42
CAPRIN1-201ENST00000341394 ATG3Q9NT62 314 aa12.46□□□□□ -0.42
CAPRIN1-201ENST00000341394 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.42
CAPRIN1-201ENST00000341394 TTLL7Q6ZT98 887 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 UTRNP46939 3433 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 VPS72Q15906 364 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 QTRT2Q9H974 415 aaKnown RBP12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 NEUROD6Q96NK8 337 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 V9GYY5 206 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-201ENST00000341394 NWD2Q9ULI1 1742 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 GAS2L3Q86XJ1 694 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 GSPT1P15170 499 aaKnown RBP12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 A0A087WZG4 1122 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 ALDH1L1O75891 902 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
CAPRIN1-201ENST00000341394 ERC2O15083 957 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 CLCN1P35523 988 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 TRPC5Q9UL62 973 aaPredicted RBP12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 KCNQ2O43526 872 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 PKP1Q13835 747 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 TRMT1Q9NXH9 659 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 GRM8O00222 908 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 BCL9O00512 1426 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 ZSCAN23Q3MJ62 389 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 EPHA10Q5JZY3 1008 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
CAPRIN1-201ENST00000341394 GPTP24298 496 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 METTL22Q9BUU2 404 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 TUBGCP6Q96RT7 1819 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 MYH14Q7Z406 1995 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 CPA1P15085 419 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 GUCY1B3Q02153 619 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 SMARCC1Q92922 1105 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-201ENST00000341394 KCNQ4P56696 695 aa12.41□□□□□ -0.42
CAPRIN1-201ENST00000341394 SUCLG2Q96I99 432 aa12.41□□□□□ -0.42
CAPRIN1-201ENST00000341394 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-201ENST00000341394 APPP05067 770 aa12.41□□□□□ -0.42
CAPRIN1-201ENST00000341394 TJP1Q07157 1748 aa12.41□□□□□ -0.42
CAPRIN1-201ENST00000341394 G3BP1Q13283 466 aaKnown RBP eCLIP12.41□□□□□ -0.427e-7■■□□□ 12.3
CAPRIN1-201ENST00000341394 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-201ENST00000341394 SRCAPQ6ZRS2 3230 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 TAF7LQ5H9L4 462 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 PDILTQ8N807 584 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 GPATCH3Q96I76 525 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 LRRCC1Q9C099 1032 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 ATP6V1DQ9Y5K8 247 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 ISM2Q6H9L7 571 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 JAKMIP1Q96N16 626 aaKnown RBP12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 FSD1Q9BTV5 496 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 SIK1P57059 783 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 SEPT12Q8IYM1 358 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 MTMR7Q9Y216 660 aa12.4□□□□□ -0.42
CAPRIN1-201ENST00000341394 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 SMC2O95347 1197 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 CASTP20810 708 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 GCKRQ14397 625 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 SMIM5Q71RC9 77 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
CAPRIN1-201ENST00000341394 CGNQ9P2M7 1197 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms