RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
BRCC3-202ENST00000340647 GRAPQ13588 217 aa22.01■■□□□ 1.11
BRCC3-202ENST00000340647 WDR63Q8IWG1 891 aa22.01■■□□□ 1.11
BRCC3-202ENST00000340647 GRAPLQ8TC17 118 aaPredicted RBP22.01■■□□□ 1.11
BRCC3-202ENST00000340647 JARID2Q92833 1246 aaPredicted RBP22.01■■□□□ 1.11
BRCC3-202ENST00000340647 CELF1Q92879 486 aaKnown RBP22.01■■□□□ 1.11
BRCC3-202ENST00000340647 MYH3P11055 1940 aa22■■□□□ 1.11
BRCC3-202ENST00000340647 GRIPAP1Q4V328 841 aa22■■□□□ 1.11
BRCC3-202ENST00000340647 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
BRCC3-202ENST00000340647 ZBTB38Q8NAP3 1195 aaPredicted RBP22■■□□□ 1.11
BRCC3-202ENST00000340647 TAF1DQ9H5J8 278 aaPredicted RBP22■■□□□ 1.11
BRCC3-202ENST00000340647 MAP3K2Q9Y2U5 619 aa22■■□□□ 1.11
BRCC3-202ENST00000340647 IRS4O14654 1257 aaPredicted RBP21.99■■□□□ 1.11
BRCC3-202ENST00000340647 VAMP4O75379 141 aa21.99■■□□□ 1.11
BRCC3-202ENST00000340647 DDX46Q7L014 1031 aaKnown RBP21.99■■□□□ 1.11
BRCC3-202ENST00000340647 PI4KAP2A4QPH2 592 aa21.98■■□□□ 1.11
BRCC3-202ENST00000340647 AOC3Q16853 763 aa21.98■■□□□ 1.11
BRCC3-202ENST00000340647 KSR2Q6VAB6 950 aa21.98■■□□□ 1.11
BRCC3-202ENST00000340647 PI4KAP1Q8N8J0 262 aa21.98■■□□□ 1.11
BRCC3-202ENST00000340647 CCDC191Q8NCU4 936 aa21.98■■□□□ 1.11
BRCC3-202ENST00000340647 PCCAP05165 728 aaPredicted RBP21.97■■□□□ 1.11
BRCC3-202ENST00000340647 EXOSC9Q06265 439 aaKnown RBP21.97■■□□□ 1.11
BRCC3-202ENST00000340647 ZNF521Q96K83 1311 aa21.97■■□□□ 1.11
BRCC3-202ENST00000340647 SLC4A2P04920 1241 aa21.96■■□□□ 1.11
BRCC3-202ENST00000340647 GPC2Q8N158 579 aa21.96■■□□□ 1.11
BRCC3-202ENST00000340647 LARGE2Q8N3Y3 721 aa21.96■■□□□ 1.11
BRCC3-202ENST00000340647 SEC31BQ9NQW1 1179 aa21.96■■□□□ 1.11
BRCC3-202ENST00000340647 MPNDQ8N594 471 aa21.95■■□□□ 1.1
BRCC3-202ENST00000340647 JDP2Q8WYK2 163 aa21.95■■□□□ 1.1
BRCC3-202ENST00000340647 CWC25Q9NXE8 425 aaPredicted RBP21.95■■□□□ 1.1
BRCC3-202ENST00000340647 SPEF2Q9C093 1822 aa21.94■■□□□ 1.1
BRCC3-202ENST00000340647 PPIP5K2O43314 1243 aa21.94■■□□□ 1.1
BRCC3-202ENST00000340647 SCNN1DP51172 638 aa21.94■■□□□ 1.1
BRCC3-202ENST00000340647 CWF19L2Q2TBE0 894 aaKnown RBP21.94■■□□□ 1.1
BRCC3-202ENST00000340647 CHADLQ6NUI6 762 aa21.94■■□□□ 1.1
BRCC3-202ENST00000340647 IQCA1LA6NCM1 817 aa21.93■■□□□ 1.1
BRCC3-202ENST00000340647 DDX58O95786 925 aaKnown RBP21.93■■□□□ 1.1
BRCC3-202ENST00000340647 KIAA2012Q0VF49 1180 aa21.93■■□□□ 1.1
BRCC3-202ENST00000340647 SCN9AQ15858 1988 aa21.93■■□□□ 1.1
BRCC3-202ENST00000340647 DPP8Q6V1X1 898 aaPredicted RBP21.93■■□□□ 1.1
BRCC3-202ENST00000340647 VPS33BQ9H267 617 aa21.93■■□□□ 1.1
BRCC3-202ENST00000340647 HACL1Q9UJ83 578 aa21.93■■□□□ 1.1
BRCC3-202ENST00000340647 YDJCA8MPS7 323 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 ITGBL1O95965 494 aaPredicted RBP21.92■■□□□ 1.1
BRCC3-202ENST00000340647 HSPA1AP0DMV8 641 aaKnown RBP21.92■■□□□ 1.1
BRCC3-202ENST00000340647 HSPA1BP0DMV9 641 aaKnown RBP21.92■■□□□ 1.1
BRCC3-202ENST00000340647 EPHX2P34913 555 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 CXCL9Q07325 125 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 TNS4Q8IZW8 715 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 STK31Q9BXU1 1019 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 POLLQ9UGP5 575 aa21.92■■□□□ 1.1
BRCC3-202ENST00000340647 PASKQ96RG2 1323 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 CDHR2Q9BYE9 1310 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 NEURL1BA8MQ27 555 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 CAPN15O75808 1086 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 RPS8P62241 208 aaKnown RBP21.91■■□□□ 1.1
BRCC3-202ENST00000340647 GPSM2P81274 684 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 FLIIQ13045 1269 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 TMC4Q7Z404 712 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 LDHDQ86WU2 507 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 GJA3Q9Y6H8 435 aa21.91■■□□□ 1.1
BRCC3-202ENST00000340647 PDE8AO60658 829 aa21.9■■□□□ 1.1
BRCC3-202ENST00000340647 EPS15P42566 896 aa21.9■■□□□ 1.1
BRCC3-202ENST00000340647 CASP7P55210 303 aa21.9■■□□□ 1.1
BRCC3-202ENST00000340647 EIF6P56537 245 aaKnown RBP21.9■■□□□ 1.1
BRCC3-202ENST00000340647 NIM1KQ8IY84 436 aa21.9■■□□□ 1.1
BRCC3-202ENST00000340647 SUPT20HQ8NEM7 779 aa21.89■■□□□ 1.09
BRCC3-202ENST00000340647 CCDC85AQ96PX6 553 aaPredicted RBP21.89■■□□□ 1.09
BRCC3-202ENST00000340647 ZNRF3Q9ULT6 936 aa21.89■■□□□ 1.09
BRCC3-202ENST00000340647 H7C1W4 665 aa21.88■■□□□ 1.09
BRCC3-202ENST00000340647 GPR101Q96P66 508 aaPredicted RBP21.88■■□□□ 1.09
BRCC3-202ENST00000340647 NSFL1CQ9UNZ2 370 aaKnown RBP21.88■■□□□ 1.09
BRCC3-202ENST00000340647 EAPPQ56P03 285 aaPredicted RBP21.87■■□□□ 1.09
BRCC3-202ENST00000340647 TTLL11Q8NHH1 800 aa21.87■■□□□ 1.09
BRCC3-202ENST00000340647 PSME4Q14997 1843 aa21.86■■□□□ 1.09
BRCC3-202ENST00000340647 WTIPA6NIX2 430 aaPredicted RBP21.86■■□□□ 1.09
BRCC3-202ENST00000340647 GCKRQ14397 625 aa21.86■■□□□ 1.09
BRCC3-202ENST00000340647 TMX4Q9H1E5 349 aaPredicted RBP21.86■■□□□ 1.09
BRCC3-202ENST00000340647 ZNF646O15015 1829 aaPredicted RBP21.85■■□□□ 1.09
BRCC3-202ENST00000340647 CTSWP56202 376 aa21.85■■□□□ 1.09
BRCC3-202ENST00000340647 CCDC152Q4G0S7 254 aa21.85■■□□□ 1.09
BRCC3-202ENST00000340647 MAP1SQ66K74 1059 aaPredicted RBP21.85■■□□□ 1.09
BRCC3-202ENST00000340647 TBC1D16Q8TBP0 767 aa21.85■■□□□ 1.09
BRCC3-202ENST00000340647 DNAAF4Q8WXU2 420 aa21.85■■□□□ 1.09
BRCC3-202ENST00000340647 KCNQ5Q9NR82 932 aa21.85■■□□□ 1.09
BRCC3-202ENST00000340647 PODXL2Q9NZ53 605 aa21.85■■□□□ 1.09
BRCC3-202ENST00000340647 SHTN1A0MZ66 631 aa21.84■■□□□ 1.09
BRCC3-202ENST00000340647 F6X3S4 739 aa21.84■■□□□ 1.09
BRCC3-202ENST00000340647 RAD17O75943 681 aa21.84■■□□□ 1.09
BRCC3-202ENST00000340647 FKBP5Q13451 457 aaPredicted RBP21.84■■□□□ 1.09
BRCC3-202ENST00000340647 GREM2Q9H772 168 aa21.84■■□□□ 1.09
BRCC3-202ENST00000340647 GPRC5DQ9NZD1 345 aa21.84■■□□□ 1.09
BRCC3-202ENST00000340647 RIMBP2O15034 1052 aa21.83■■□□□ 1.09
BRCC3-202ENST00000340647 GMPSP49915 693 aaPredicted RBP21.83■■□□□ 1.09
BRCC3-202ENST00000340647 FMR1Q06787 632 aaKnown RBP eCLIP21.83■■□□□ 1.09
BRCC3-202ENST00000340647 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.09
BRCC3-202ENST00000340647 PNMA8AQ86V59 439 aaPredicted RBP21.83■■□□□ 1.09
BRCC3-202ENST00000340647 CREBZFQ9NS37 354 aa21.83■■□□□ 1.09
BRCC3-202ENST00000340647 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms