RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC4A10Q6U841 1118 aa24.35■■□□□ 1.49
SYNE4-202ENST00000340477 UBE3BQ7Z3V4 1068 aa24.35■■□□□ 1.49
SYNE4-202ENST00000340477 TMC4Q7Z404 712 aa24.35■■□□□ 1.49
SYNE4-202ENST00000340477 GRAPLQ8TC17 118 aaPredicted RBP24.35■■□□□ 1.49
SYNE4-202ENST00000340477 BCL2L13Q9BXK5 485 aa24.35■■□□□ 1.49
SYNE4-202ENST00000340477 DICER1Q9UPY3 1922 aaKnown RBP24.35■■□□□ 1.49
SYNE4-202ENST00000340477 FKBP4Q02790 459 aaKnown RBP eCLIP24.34■■□□□ 1.49
SYNE4-202ENST00000340477 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
SYNE4-202ENST00000340477 BEND3Q5T5X7 828 aa24.32■■□□□ 1.48
SYNE4-202ENST00000340477 SRCIN1Q9C0H9 1055 aa24.32■■□□□ 1.48
SYNE4-202ENST00000340477 GPBP1L1Q9HC44 474 aaPredicted RBP24.32■■□□□ 1.48
SYNE4-202ENST00000340477 ATP6V0A2Q9Y487 856 aa24.32■■□□□ 1.48
SYNE4-202ENST00000340477 ALDH1L1O75891 902 aa24.31■■□□□ 1.48
SYNE4-202ENST00000340477 TAF1P21675 1872 aa24.31■■□□□ 1.48
SYNE4-202ENST00000340477 OLFM4Q6UX06 510 aa24.31■■□□□ 1.48
SYNE4-202ENST00000340477 ZNF526Q8TF50 670 aaPredicted RBP24.31■■□□□ 1.48
SYNE4-202ENST00000340477 H7C1W4 665 aa24.3■■□□□ 1.48
SYNE4-202ENST00000340477 CTSWP56202 376 aa24.3■■□□□ 1.48
SYNE4-202ENST00000340477 PSMD1Q99460 953 aa24.3■■□□□ 1.48
SYNE4-202ENST00000340477 C9orf78Q9NZ63 289 aaPredicted RBP24.3■■□□□ 1.48
SYNE4-202ENST00000340477 SP8Q8IXZ3 490 aa24.29■■□□□ 1.48
SYNE4-202ENST00000340477 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
SYNE4-202ENST00000340477 KIF16BQ96L93 1317 aa24.29■■□□□ 1.48
SYNE4-202ENST00000340477 LRRC37AA6NMS7 1700 aa24.28■■□□□ 1.48
SYNE4-202ENST00000340477 SUPT20HQ8NEM7 779 aa24.27■■□□□ 1.48
SYNE4-202ENST00000340477 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
SYNE4-202ENST00000340477 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
SYNE4-202ENST00000340477 GRM8O00222 908 aa24.26■■□□□ 1.47
SYNE4-202ENST00000340477 RARSP54136 660 aaKnown RBP24.26■■□□□ 1.47
SYNE4-202ENST00000340477 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
SYNE4-202ENST00000340477 DPP8Q6V1X1 898 aaPredicted RBP24.26■■□□□ 1.47
SYNE4-202ENST00000340477 CELF1Q92879 486 aaKnown RBP24.26■■□□□ 1.47
SYNE4-202ENST00000340477 CDC5LQ99459 802 aaKnown RBP24.26■■□□□ 1.47
SYNE4-202ENST00000340477 PLA2G12BQ9BX93 195 aa24.26■■□□□ 1.47
SYNE4-202ENST00000340477 API5Q9BZZ5 524 aaKnown RBP24.26■■□□□ 1.47
SYNE4-202ENST00000340477 SNED1Q8TER0 1413 aa24.26■■□□□ 1.47
SYNE4-202ENST00000340477 IARSP41252 1262 aaKnown RBP24.25■■□□□ 1.47
SYNE4-202ENST00000340477 PRELPP51888 382 aa24.25■■□□□ 1.47
SYNE4-202ENST00000340477 BRPF1P55201 1214 aaPredicted RBP24.25■■□□□ 1.47
SYNE4-202ENST00000340477 DPY19L2Q6NUT2 758 aa24.24■■□□□ 1.47
SYNE4-202ENST00000340477 ANKRD18AQ8IVF6 992 aa24.24■■□□□ 1.47
SYNE4-202ENST00000340477 MPNDQ8N594 471 aa24.24■■□□□ 1.47
SYNE4-202ENST00000340477 TTLL11Q8NHH1 800 aa24.24■■□□□ 1.47
SYNE4-202ENST00000340477 JDP2Q8WYK2 163 aa24.24■■□□□ 1.47
SYNE4-202ENST00000340477 RTL9Q8NET4 1388 aa24.24■■□□□ 1.47
SYNE4-202ENST00000340477 SEC31BQ9NQW1 1179 aa24.23■■□□□ 1.47
SYNE4-202ENST00000340477 NOB1Q9ULX3 412 aaKnown RBP24.23■■□□□ 1.47
SYNE4-202ENST00000340477 SPEF2Q9C093 1822 aa24.23■■□□□ 1.47
SYNE4-202ENST00000340477 IPO8O15397 1037 aaKnown RBP24.22■■□□□ 1.47
SYNE4-202ENST00000340477 CASP7P55210 303 aa24.22■■□□□ 1.47
SYNE4-202ENST00000340477 CCT4P50991 539 aaKnown RBP24.21■■□□□ 1.47
SYNE4-202ENST00000340477 LARGE2Q8N3Y3 721 aa24.21■■□□□ 1.47
SYNE4-202ENST00000340477 GREM2Q9H772 168 aa24.21■■□□□ 1.47
SYNE4-202ENST00000340477 CHMP3Q9Y3E7 222 aa24.21■■□□□ 1.47
SYNE4-202ENST00000340477 PPIP5K2O43314 1243 aa24.2■■□□□ 1.46
SYNE4-202ENST00000340477 IGHMBP2P38935 993 aaKnown RBP24.2■■□□□ 1.46
SYNE4-202ENST00000340477 VPS33BQ9H267 617 aa24.2■■□□□ 1.46
SYNE4-202ENST00000340477 GLTPD2A6NH11 291 aa24.19■■□□□ 1.46
SYNE4-202ENST00000340477 ARHGAP45Q92619 1136 aa24.19■■□□□ 1.46
SYNE4-202ENST00000340477 RTFDC1Q9BY42 306 aaPredicted RBP24.19■■□□□ 1.46
SYNE4-202ENST00000340477 NSFL1CQ9UNZ2 370 aaKnown RBP24.19■■□□□ 1.46
SYNE4-202ENST00000340477 ITGA6P23229 1130 aa24.18■■□□□ 1.46
SYNE4-202ENST00000340477 FAM161AQ3B820 660 aa24.18■■□□□ 1.46
SYNE4-202ENST00000340477 NIM1KQ8IY84 436 aa24.18■■□□□ 1.46
SYNE4-202ENST00000340477 ANKIB1Q9P2G1 1089 aa24.18■■□□□ 1.46
SYNE4-202ENST00000340477 COL4A1P02462 1669 aa24.18■■□□□ 1.46
SYNE4-202ENST00000340477 ANKRD18BA2A2Z9 1011 aa24.17■■□□□ 1.46
SYNE4-202ENST00000340477 SLC51AQ86UW1 340 aa24.17■■□□□ 1.46
SYNE4-202ENST00000340477 FRAT1Q92837 279 aaPredicted RBP24.17■■□□□ 1.46
SYNE4-202ENST00000340477 C6orf229H3BNL8 230 aa24.16■■□□□ 1.46
SYNE4-202ENST00000340477 CSF1RP07333 972 aa24.16■■□□□ 1.46
SYNE4-202ENST00000340477 EIF6P56537 245 aaKnown RBP24.16■■□□□ 1.46
SYNE4-202ENST00000340477 IFIT5Q13325 482 aaKnown RBP24.16■■□□□ 1.46
SYNE4-202ENST00000340477 C16orf71Q8IYS4 520 aaPredicted RBP24.16■■□□□ 1.46
SYNE4-202ENST00000340477 EYA3Q99504 573 aa24.16■■□□□ 1.46
SYNE4-202ENST00000340477 MPHOSPH8Q99549 860 aa24.16■■□□□ 1.46
SYNE4-202ENST00000340477 UTYO14607 1347 aa24.15■■□□□ 1.46
SYNE4-202ENST00000340477 AOC3Q16853 763 aa24.15■■□□□ 1.46
SYNE4-202ENST00000340477 TAF7LQ5H9L4 462 aa24.15■■□□□ 1.46
SYNE4-202ENST00000340477 DUOX1Q9NRD9 1551 aa24.15■■□□□ 1.46
SYNE4-202ENST00000340477 LTBP1Q14766 1721 aa24.15■■□□□ 1.46
SYNE4-202ENST00000340477 XDHP47989 1333 aa24.14■■□□□ 1.46
SYNE4-202ENST00000340477 GPSM2P81274 684 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 FOXO4P98177 505 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 CCDC57Q2TAC2 916 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 LMBR1LQ6UX01 489 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 NMRK2Q9NPI5 230 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 BSDC1Q9NW68 430 aaPredicted RBP24.14■■□□□ 1.45
SYNE4-202ENST00000340477 GGA1Q9UJY5 639 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 HDAC5Q9UQL6 1122 aa24.14■■□□□ 1.45
SYNE4-202ENST00000340477 WDR90Q96KV7 1748 aa24.13■■□□□ 1.45
SYNE4-202ENST00000340477 BCAR3O75815 825 aa24.13■■□□□ 1.45
SYNE4-202ENST00000340477 NBPF7P0C2Y1 421 aaPredicted RBP24.13■■□□□ 1.45
SYNE4-202ENST00000340477 KIAA2012Q0VF49 1180 aa24.13■■□□□ 1.45
SYNE4-202ENST00000340477 SUCLG2Q96I99 432 aa24.13■■□□□ 1.45
SYNE4-202ENST00000340477 PODXL2Q9NZ53 605 aa24.13■■□□□ 1.45
SYNE4-202ENST00000340477 UFL1O94874 794 aa24.12■■□□□ 1.45
SYNE4-202ENST00000340477 WASHC4Q2M389 1173 aa24.12■■□□□ 1.45
SYNE4-202ENST00000340477 ZKSCAN2Q63HK3 967 aa24.12■■□□□ 1.45
SYNE4-202ENST00000340477 ATF7IPQ6VMQ6 1270 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms